产毒素大肠杆菌LTB-K99融合基因的构建

利用PCR技术从原始菌种中扩增得到K99和LTB基因,将K99和LTB基因连接起来,构建了LTB-K99融合基因.融合基因克隆到pBS-T载体上,转化大肠杆菌top10,经Bam HI和Xho I双酶切鉴定重组质粒.测序分析结果表明,该融合基因有正确的阅读框,为以后转入表达载体的构建奠定了基础.     

烟草反义Mlo基因表达载体的构建

获得烟草反义Mlo基因的植物表达载体pBI 121-Mlo,为进行烟草遗传转化,获得该基因表达的缺陷型植株打下基础.从烟草叶片中提取总RNA,利用RT-PCR技术扩增得到Mlo基因的c DNA,以此为模板设计反义引物,通过PCR扩增出反义Mlo基因,将此反义Mlo基因与T载体连接,测序正确后再将此反义片段与植物表达载体pBI 121连接,构建烟草反义Mlo基因的植物表达载体pBI 121-Mlo.经Kan选择筛选出反义重组菌落,碱裂解法小量提取质粒后,用Xba I和Bam HI双酶切后再进行电泳鉴定.结果表明,目的基因已与植物表达载体pBI 121连接成功.成功构建了烟草反义Mlo基因表达载体pBI 121-Mlo.     

重组人乙酰胆碱受体α亚基的克隆及初步表达

为获得高表达的人乙酰胆碱受体 (human acetylcholine receptor,Ach R)α亚基蛋白 ,根据已知的乙酰胆碱受体α亚基序列 ,设计并合成了一对引物 ,以含乙酰胆碱受体α亚基 DNA的重组质粒 p UC- Ach R为模板 ,应用PCR技术 ,扩增乙酰碱受α亚基的片段。将该扩增片段与载体 p ET32 M分别用 Bam HI/ Hind III双酶切 ,然后在T4 DNA连接酶作用下 ,将乙酰胆碱受体α亚基片段插入载体 p ET32 M中 ,且与载体中的硫氧还蛋白 (约 14 k D)基因融合。重组质粒 p ET32 M- Ach R含 T7启动子 ,为 IPTG诱导型。经双酶切鉴定 ,序列测定及工程菌初步表达分析 ,表明获得了正确的重组质粒 p ET32 M- Ach R,且在大肠杆菌 BL2 1中有明显表达 ,硫氧还蛋白 -乙酰胆碱受体融合蛋白的分子量约 37k D,但主要以包涵体形式存在。     

脂多糖诱导肿瘤坏死因子释放因子基因过表达慢病毒载体的构建及鉴定

探讨构建人脂多糖诱导肿瘤坏死因子释放因子(LITAF)基因的过表达慢病毒载体的技术方法,并检测其体外表达目的基因的水平。设计LITAF基因引物,应用聚合酶链反应(PCR)的方法扩增LITAF基因片段;应用EcoRI、Bam HI酶切LV8载体,通过连接酶将LITAF基因片段连接至线性化的LV8载体上,应用酶切及测序方法鉴定LITAF-LV8重组质粒,将其包装慢病毒后感染293T细胞(人胚肾细胞),观察绿色荧光蛋白(GFP)的表达,验证后感染肝癌细胞株HepG2。RT-PCR和Westernblot鉴定感染后HepG2中LITAF的表达。LITAF基因在慢病毒感染的HepG2细胞中的表达显著高于对照组细胞。说明成功构建了过表达LITAF的HepG2细胞株,为后期研究提供了实验基础。     

小鼠脂多糖应答蛋白mlrpS的载体构建及融合蛋白表达

为构建小鼠mlrpS-cDNA基因原核、真核表达载体，大肠杆菌表达其融合蛋白。采用反转录-聚合酶链反应从经脂多糖刺激的鼠NIH3T3细胞cDNA中，扩增出编码mlrpS的cDNA。用限制性内切酶KpnⅠand XhoⅠ消化后，插入原核表达载体pTAT中，经酶切鉴定与测序证实后，转化大肠杆菌BL21（DE3）菌株。异丙基β—D硫代半乳糖苷（IPTG）诱导产生融合蛋白。经KpnⅠ和XhoⅠ酶切回收mlrpS-cDNA，插入pcDNA3．1载体中；pcDNA3．1-mlrpS再经KpnⅠ和ApaⅠ酶切后，插入到pEGFP—c1载体上，构建pEGFP-mlrpS融合的真核表达载体。构建mlrpS表达载体经测序证实，与GenBank登录的序列完全一致；双酶切鉴定证实，克隆基因正确插入载体pEGFP及pTAT；SDS—PAGE证实融合蛋白表达成功。说明：成功地构建了mlrpS原核、真核表达载体，成功正确表达了6His／mlrpS融合蛋白。     

MiR-218慢病毒表达载体的构建及鉴定

摘要:构建人mir-218-2, pre-miRNA慢病毒表达载体,为研究miR-218在人体的功能及作用机制打下基础。以人hsa-mir-218-2前体序列,设计部分互补的正反向引物,进行引物退火,形成引物二聚体,PCR扩增引物二聚体,酶切后插入到线性化pGCSIL-GFP慢病毒表达载体中,对重组质粒进行双酶切鉴定,并进行慢病毒的包装与滴度检测。用构建好的慢病毒表达载体感染人胃癌细胞MKN-28,qPCR检测细胞内miR-218表达。结果显示,重组质粒经双酶切分析及转化菌液测序,插入序列正确,慢病毒表达载体感染人胃癌细胞后qPCR检测显示能显著增高miR-218的表达。说明本实验成功构建了hsa-mir-218-2慢病毒表达载体,感染人胃癌细胞后能有效提高miR-218的表达。为进一步研究miR-218在人体的功能及作用机制建立了实验基础。     

异戊烯基转移酶基因克隆及植物表达载体构建

根据已知的异戊烯基转移酶基因保守序列设计引物,以根癌农杆菌C58的Ti质粒为模板,采用PCR方法扩增获得了异戊烯基转移酶基因723bp的片段.将该片段回收,连接到pMD18-T载体测序,测序片段经酶切回收后克隆到植物表达载体pBI121中,转化至大肠杆菌感受态细胞DH5α.将阳性质粒转化农杆菌感受态细胞EHA105,经菌液和质粒PCR分析,获得了真核表达载体pBI121-ipt,这为异戊烯基转移酶基因功能的进一步研究提供了基础.     

含PGK启动子慢病毒表达质粒的构建与鉴定

为了构建一个含有人源PGK1(human phosphoglycerate kinase 1)启动子的慢病毒表达载体 pL-PGK-GFP.采用PCR从人组织中扩增PGK1基因的启动子部分,再用酶切-连接的方法将扩增的启动子区片段亚克隆入慢病毒表达质粒pL-EGFP中,再用测序、酶切和瞬时表达的方法进行鉴定.结果是下游的eGFP基因在PGK1启动子驱动下,在293FT细胞中表达绿色荧光蛋白报告基因,这表明成功构建了慢病毒表达质粒pL-PGK-GFP.扩增的537bp PGK1启动子片段具有一定的启动效率,能在HIV来源的慢病毒载体中驱动下游目的基因的表达.     

动物基因工程慢病毒载体--一种将传染性病毒颗粒转变成基因治疗的载体

慢病毒载体是一类逆转录载体,它既能感染分裂细胞,也能够感染非分裂细胞.也就是说,它能够广泛地应用于基因治疗,构建转基因动物和结合RNAi技术进行基因功能研究.     

Characterization of Ordovician carbonate reservoirs, southeastern Saskatchewan, Canada

The discovery of the prolific Ordovician Red River reservoirs in 1995 in southeastern Saskatchewan was the catalyst for extensive exploration activity which resulted in the discovery of more than 15 new Red River pools. The best yields of Red River production to date have been from dolomite reservoirs. Understanding the processes of dolomitization is, therefore, crucial for the prediction of the connectivity, spatial distribution and heterogeneity of dolomite reservoirs.The Red River reservoirs in the Midale area consist of 3～4 thin dolomitized zones, with a total thickness of about 20 m, which occur at the top of the Yeoman Formation. Two types of replacement dolomite were recognized in the Red River reservoir: dolomitized burrow infills and dolomitized host matrix. The spatial distribution of dolomite suggests that burrowing organisms played an important role in facilitating the fluid flow in the backfilled sediments. This resulted in penecontemporaneous dolomitization of burrow infills by normal seawater. The dolomite in the host matrix is interpreted as having occurred at shallow burial by evaporitic seawater during precipitation of Lake Almar anhydrite that immediately overlies the Yeoman Formation. However, the low δ18O values of dolomited burrow infills (-5.9‰～ -7.8‰, PDB) and matrix dolomites (-6.6‰～ -8.1‰, avg. -7.4‰ PDB) compared to the estimated values for the late Ordovician marine dolomite could be attributed to modification and alteration of dolomite at higher temperatures during deeper burial, which could also be responsible for its 87Sr/86Sr ratios (0.7084～0.7088) that are higher than suggested for the late Ordovician seawaters (0.7078～0.7080). The trace amounts of saddle dolomite cement in the Red River carbonates are probably related to "cannibalization" of earlier replacement dolomite during the chemical compaction.     

A computer generator for randomly layered structures

AcomputergeneratorforrandomlylayeredstructuresYUJia shun1,2,HEZhen hua2(1.TheInstituteofGeologicalandNuclearSciences,NewZealand;2.StateKeyLaboratoryofOilandGasReservoirGeologyandExploitation,ChengduUniversityofTechnology,China)Abstract:Analgorithmisintrod…     

海南岛地体及其毗邻陆缘晚中生代—新生代古地磁研究和构造演化

本文叙述了对海南岛及其毗邻大陆边缘白垩纪到第四纪地层岩石进行古地磁研究的全部工作过程。通过分析岩石中剩余磁矢量的磁偏角及磁倾角的变化,提出海南岛白垩纪以来经历的构造演化模式如下:早期伴随顺时针旋转而向南迁移,后期伴随逆时针转动并向北运移。联系该地区及邻区的地质、地球物理资料,对海南岛上述的构造地体运动提出以下认识:北部湾内早期有一拉张作用,主要是该作用使湾内地壳显著伸长减薄,形成北部湾盆地。从而导致了海南岛的早期构造运动,而海南岛后期的构造运动则主要是受南海海底扩张的影响。海南地体运动规律的阐明对于了解北部湾油气盆地的形成演化有重要的理论和实际意义。     

Exciton Seebeck in Molecular Systems

Various applications relevant to the exciton dynamics,such as the organic solar cell,the large-area organic light-emitting diodes and the thermoelectricity,are operating under temperature gradient.The potential abnormal behavior of the exicton dynamics driven by the temperature difference may affect the efficiency and performance of the corresponding devices.In the above situations,the exciton dynamics under temperature difference is mixed with     

Achieving Unusual States of Matter Under High Pressure

The elongation method,originally proposed by Imamura was further developed for many years in our group.As a method towards O(N)with high efficiency and high accuracy for any dimensional systems.This treatment designed for one-dimensional(ID)polymers is now available for three-dimensional(3D)systems,but geometry optimization is now possible only for 1D-systems.As an approach toward post-Hartree-Fock,it was also extended to     

《Chinese Science Bulletin》SUBJECT INDEX TO VOLUME 59(2014)

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An on-line scaling method for improving scalability of a database cluster

The explosive growth of the Internet and database applications has driven database to be more scalable and available, and able to support on-line scaling without interrupting service. To support more client's queries without downtime and degrading the response time, more nodes have to be scaled up while the database is running. This paper presents the overview of scalable and available database that satisfies the above characteristics. And we propose a novel on-line scaling method. Our method improves the existing on-line scaling method for fast response time and higher throughputs. Our proposed method reduces unnecessary network use, i.e. , we decrease the number of data copy by reusing the backup data. Also, our on-line scaling operation can be processed parallel by selecting adequate nodes as new node. Our performance study shows that our method results in significant reduction in data copy time.     

An improved R-tree based on childnode''s probability

R-Tree is a good structure for spatial searching. But in this indexing structure,either the sequence of nodes in the same level or sequence of traveling these nodes when queries are made is random. Since the possibility that the object appears in different MBR which have the same parents node is different, if we make the subnode who has the most possibility be traveled first, the time cost will be decreased in most of the cases. In some case, the possibility of a point belong to a rectangle will shows direct proportion with the size of the rectangle. But this conclusion is based on an assumption that the objects are symmetrically distributing in the area and this assumption is not always coming into existence. Now we found a more direct parameter to scale the possibility and made a little change on the structure of R-tree, to increase the possibility of founding the satisfying answer in the front sub trees. We names this structure probability based arranged R-tree (PBAR-tree).     

Integrating GIS Web services based on mediating architecture

The geographic information service is enabled by the advancements in general Web service technology and the focused efforts of the OGC in defining XML-based Web GIS service. Based on these models, this paper addresses the issue of services chaining,the process of combining or pipelining results from several interoperable GIS Web Services to create a customized solution. This paper presents a mediated chaining architecture in which a specific service takes responsibility for performing the process that describes a service chain. We designed the Spatial Information Process Language (SIPL) for dynamic modeling and describing the service chain, also a prototype of the Spatial Information Process Execution Engine (SIPEE) is implemented for executing processes written in SIPL. Discussion of measures to improve the functionality and performance of such system will be included.     

Tracking data management using topology of moving object database system for moving object constrained trajectory in LBS application

Advances in wireless technologies and positioning technologies and spread of wireless devices, an interest in LBS (Location Based Service) is arising. To provide location based service, tracking data should have been stored in moving object database management system (called MODBMS) with proper policies and managed efficiently. So the methods which acquire the location information at regular time intervals then, store and manage have been studied. In this paper, we suggest tracking data management techniques using topology that is corresponding to the moving path of moving object. In our techniques, we update the MODBMS when moving object arrived at a street intersection or a curved road which is represented as the node in topology and predict the location at past and future with attribute of topology and linear function. In this technique, location data that are corresponding to the node in topology are stored, thus reduce the number of update and amount of data. Also in case predicting the location,because topology are used as well as existing location information, accuracy for prediction is increased than applying linear function or spline function.