纳豆激酶基因重组表达载体的构建及其稳定性

利用PCR方法从分泌纳豆激酶的纳豆杆菌基因组DN中扩增纳豆激酶基因,将该基因克隆到表达载体PBV220上,筛选重组子,通过限制性内切酶和PCR技术分析,初步确定该重组子所携外源基因为纳豆激酶基因,用凝块溶解时间法（CLT）测出表达产物具有溶解血栓活性,证明该基因可在大肠杆菌中表达,对重组菌中重组质粒的稳定性进行研究,结果表明质粒的插入对宿主菌的生长没有太大影响,该质粒在宿主菌中具有良好的分离稳定性,但结构稳定性较差,SDS-PAGE分析结果表明基因产物为分泌型,蛋白表达量占菌体蛋白的12%左右。     

分泌性表达人rPA毕赤酵母工程菌株的构建及发酵条件的初步优化

通过PCR扩增得到组织型纤溶酶原激活剂突变体Reteplase(rPA)基因片断，将该基因片断插入到含有AOX1启动子和α分泌信号肽序列载体pPIC9K中，构建了重组表达质粒pPICgK／rPA，转化Pichia pastoris GS115宿主菌．通过比较转化子在MM和MD平板上的生长状况，筛选His^ Mut^s表型转化子．并在2．0mg/mL G418平板筛选得到多拷贝转化子GR10，GR11．摇瓶培养，甲醇诱导外源基因表达，表达产物经SDS-PAGE和Western blot分析，结果表明重组蛋白分子量约39ku，能与特异性单克隆抗体发生免疫反应；体外气泡法测定rPA活性，结果显示重组蛋白具有较好的纤溶活性．通过正交试验，优化发酵条件，表达活性最高为1050IU／mL．     

纳豆激酶基因在巴斯德毕赤酵母中的表达

构建pPICZαA-NK重组质粒，并转化入E.coli TOP-10中，得到转纳豆激酶基因工程菌，提取重组质粒经单酶切，双酶切，PCR分析及序列测定，证明克隆到载体pPICZαA上的外源基因即为纳豆激酶基因，将重组质粒pPICZαA-NK线性化后，分别转化毕赤酵母GS115与KM71，在含Zeocin^TM的选择性YEPD平板筛选到重组酵母，经检测重组酵母发酵上清液中具纳豆激酶溶纤活性，SDS-PAGE电泳结果表明外源蛋白的表达量占菌体蛋白的10%左右。     

VMIP—Ⅱ肽在大肠杆菌中的双辅助助子高效表达

目的构建病毒趋化因子(vMIP-II)基因表达载体并在大肠杆菌中以辅助折叠和辅助阻遏方式高效表达vMIP-II重组肽. 方法用PCR法获得vMIP-II基因片断,将其插入表达载体pQE,构建重组表达载体pEh-vMIP. 表达载体、辅助折叠子和辅助阻遏子载体共转染大肠杆菌DH5α,用酶切、DNA测序、PCR扩增鉴定阳性克隆. 结果阳性重组子在大肠杆菌细胞中经IPTG诱导可高效表达vMIP-II重组肽,蛋白电泳分析可观察到一相对分子质量与理论值相符(约8×103)的诱导表达条带, 其表达量约占菌体总蛋白的20%. 分析表明,vMIP-II重组肽主要以可溶性形式表达. 结论用双辅助技术在大肠杆菌中高效表达较小相对分子质量vMIP-II的成功,为进一步研究vMIP-II的功能及应用奠定基础,也为同类小分子、易降解的肽类物提供基因工程表达方法.     

vMIP-Ⅱ肽在大肠杆菌中的双辅助子高效表达

目的:构建病毒趋化因子(vMIP-II)基因表达载体并在大肠杆菌中以辅助折叠和辅助阻遏方式高效表达vMIP-II重组肽. 方法:用PCR法获得vMIP-II基因片断,将其插入表达载体pQE,构建重组表达载体pEh-vMIP. 表达载体、辅助折叠子和辅助阻遏子载体共转染大肠杆菌DH5α,用酶切、DNA测序、PCR扩增鉴定阳性克隆. 结果:阳性重组子在大肠杆菌细胞中经IPTG诱导可高效表达vMIP-II重组肽,蛋白电泳分析可观察到一相对分子质量与理论值相符(约8×103)的诱导表达条带, 其表达量约占菌体总蛋白的20%. 分析表明,vMIP-II重组肽主要以可溶性形式表达. 结论:用双辅助技术在大肠杆菌中高效表达较小相对分子质量vMIP-II的成功,为进一步研究vMIP-II的功能及应用奠定基础,也为同类小分子、易降解的肽类物提供基因工程表达方法.     

vMIP-II肽在大肠杆菌中的双辅助子高效表达

目的 :构建病毒趋化因子 (vMIP -II)基因表达载体并在大肠杆菌中以辅助折叠和辅助阻遏方式高效表达vMIP -II重组肽 .方法 :用PCR法获得vMIP -II基因片断 ,将其插入表达载体pQE ,构建重组表达载体pEh -vMIP .表达载体、辅助折叠子和辅助阻遏子载体共转染大肠杆菌DH5α ,用酶切、DNA测序、PCR扩增鉴定阳性克隆 .结果 :阳性重组子在大肠杆菌细胞中经IPTG诱导可高效表达vMIP -II重组肽 ,蛋白电泳分析可观察到一相对分子质量与理论值相符 (约 8× 10 3)的诱导表达条带 ,其表达量约占菌体总蛋白的 2 0 % .分析表明 ,vMIP -II重组肽主要以可溶性形式表达 .结论 :用双辅助技术在大肠杆菌中高效表达较小相对分子质量vMIP -II的成功 ,为进一步研究vMIP -II的功能及应用奠定基础 ,也为同类小分子、易降解的肽类物提供基因工程表达方法     

一种新型纳豆激酶基因的克隆及在大肠杆菌中的表达

从市售纳豆中分离得到一株芽孢杆菌,命名为纳豆芽孢杆菌FDM415.提取其基因组DNA,利用聚合酶链式反应(PCR)扩增获得含纳豆激酶编码基因的DNA片段(1179 bp);测序结果证实所分离得到的纳豆激酶编码基因NKM与文献报道(GI:29164926)的NK基因有17个碱基差异,所编码的氨基酸有3个残基不同.将该基因连接到pMG36e表达载体并导入大肠杆菌JF1125中表达,测得的纤溶酶活力为468 U/L.     

GST-SDF-1α融合蛋白的原核表达及纯化

构建融合重组表达载体并对其进行诱导表达蛋白以获得大量重组融合蛋白。通过PCR方法扩增出小鼠SDF-1α基因,克隆入pMD18T载体中,进行测序分析。将该基因亚克隆入原核表达载体pGEX-4T11中GST的下游构建重组质粒pGEX-4T1-SDF-1α,转化受态细胞BL21中,经IPTG诱导表达重组融合蛋白,对表达产物进行SDS-PAGE电泳检测分析。在约Mr36×103处出现一新生的蛋白条带。经灰度扫描检测,表达量约占菌体总蛋白的30%,纯化后得到了目的蛋白。成功克隆了小鼠的SDF-1α基因,并纯化融合基因GST-SDF-1α的原核表达产物。     

重组人组织型纤溶酶原激活剂缺失变体基因的克隆及工程菌的构建与鉴定

利用RT-PCR技术,从人脐带静脉上皮细胞中克隆人组织型纤溶酶原激活剂基因,将其接入TA克隆载体PCR2．1中,经DNA序列测定后,以该重组质粒DNA为模板,用PCR方法获得了人组织型纤溶酶原激活剂缺失变体(K2tPA)基因,将其转入pET29a,构建了重组表达质粒pET29a／K2tPA,并转化至大肠杆菌BL21(DE3)中,构成工程菌．经IPTG诱导表达,在40kDa处有一明显表达条带,表达量为约占菌体总蛋白的20％．该菌种在贮存与复苏及传代过程中具有良好的质粒稳定性和表达稳定性．     

HLA-A*0207重链胞外区原核表达载体的构建及表达

目的：克隆HLA-A*0207(A2)重链基因，构建在羧基端融合生物索化酶BirA底物肽(BirA substrate peptide，BSP)的A2重链胞外区原核表达载体，在大肠杆菌中进行表达。方法：以RT-PCR方法从HLA-A2^ 供白细胞中克隆A2基因并进行DNA测序，并以PCR方法构建在羧基端融合BSP的A2重链胞外区表达载体，在大肠杆菌B121(ED3)中进行表达。结果：从31名HLA-A2^ 供白细胞中克隆到的基因经DNA测序显示，只有从供2得到的基因是HLA-A*0207。将编码该基因编码重链胞外区1-275的序列和编码BSP的序列融合，构建融合蛋白表达载体，并以测序验证。融合蛋白在B121(ED3)中获得高效表达，产物相对分子质量为35000，约占菌体总蛋白的30％，主要存在于包涵体中，对包涵体进行洗涤后得到纯度为80％的重组蛋白。结论：成功克隆HLA-A*0207基因，构建了其胞外区和BSP融合蛋白表达载体并在大肠杆菌中获得高效表达。     

Characterization of Ordovician carbonate reservoirs, southeastern Saskatchewan, Canada

The discovery of the prolific Ordovician Red River reservoirs in 1995 in southeastern Saskatchewan was the catalyst for extensive exploration activity which resulted in the discovery of more than 15 new Red River pools. The best yields of Red River production to date have been from dolomite reservoirs. Understanding the processes of dolomitization is, therefore, crucial for the prediction of the connectivity, spatial distribution and heterogeneity of dolomite reservoirs.The Red River reservoirs in the Midale area consist of 3～4 thin dolomitized zones, with a total thickness of about 20 m, which occur at the top of the Yeoman Formation. Two types of replacement dolomite were recognized in the Red River reservoir: dolomitized burrow infills and dolomitized host matrix. The spatial distribution of dolomite suggests that burrowing organisms played an important role in facilitating the fluid flow in the backfilled sediments. This resulted in penecontemporaneous dolomitization of burrow infills by normal seawater. The dolomite in the host matrix is interpreted as having occurred at shallow burial by evaporitic seawater during precipitation of Lake Almar anhydrite that immediately overlies the Yeoman Formation. However, the low δ18O values of dolomited burrow infills (-5.9‰～ -7.8‰, PDB) and matrix dolomites (-6.6‰～ -8.1‰, avg. -7.4‰ PDB) compared to the estimated values for the late Ordovician marine dolomite could be attributed to modification and alteration of dolomite at higher temperatures during deeper burial, which could also be responsible for its 87Sr/86Sr ratios (0.7084～0.7088) that are higher than suggested for the late Ordovician seawaters (0.7078～0.7080). The trace amounts of saddle dolomite cement in the Red River carbonates are probably related to "cannibalization" of earlier replacement dolomite during the chemical compaction.     

A computer generator for randomly layered structures

AcomputergeneratorforrandomlylayeredstructuresYUJia shun1,2,HEZhen hua2(1.TheInstituteofGeologicalandNuclearSciences,NewZealand;2.StateKeyLaboratoryofOilandGasReservoirGeologyandExploitation,ChengduUniversityofTechnology,China)Abstract:Analgorithmisintrod…     

海南岛地体及其毗邻陆缘晚中生代—新生代古地磁研究和构造演化

本文叙述了对海南岛及其毗邻大陆边缘白垩纪到第四纪地层岩石进行古地磁研究的全部工作过程。通过分析岩石中剩余磁矢量的磁偏角及磁倾角的变化,提出海南岛白垩纪以来经历的构造演化模式如下:早期伴随顺时针旋转而向南迁移,后期伴随逆时针转动并向北运移。联系该地区及邻区的地质、地球物理资料,对海南岛上述的构造地体运动提出以下认识:北部湾内早期有一拉张作用,主要是该作用使湾内地壳显著伸长减薄,形成北部湾盆地。从而导致了海南岛的早期构造运动,而海南岛后期的构造运动则主要是受南海海底扩张的影响。海南地体运动规律的阐明对于了解北部湾油气盆地的形成演化有重要的理论和实际意义。     

Exciton Seebeck in Molecular Systems

Various applications relevant to the exciton dynamics,such as the organic solar cell,the large-area organic light-emitting diodes and the thermoelectricity,are operating under temperature gradient.The potential abnormal behavior of the exicton dynamics driven by the temperature difference may affect the efficiency and performance of the corresponding devices.In the above situations,the exciton dynamics under temperature difference is mixed with     

Achieving Unusual States of Matter Under High Pressure

The elongation method,originally proposed by Imamura was further developed for many years in our group.As a method towards O(N)with high efficiency and high accuracy for any dimensional systems.This treatment designed for one-dimensional(ID)polymers is now available for three-dimensional(3D)systems,but geometry optimization is now possible only for 1D-systems.As an approach toward post-Hartree-Fock,it was also extended to     

《Chinese Science Bulletin》SUBJECT INDEX TO VOLUME 59(2014)

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An on-line scaling method for improving scalability of a database cluster

The explosive growth of the Internet and database applications has driven database to be more scalable and available, and able to support on-line scaling without interrupting service. To support more client's queries without downtime and degrading the response time, more nodes have to be scaled up while the database is running. This paper presents the overview of scalable and available database that satisfies the above characteristics. And we propose a novel on-line scaling method. Our method improves the existing on-line scaling method for fast response time and higher throughputs. Our proposed method reduces unnecessary network use, i.e. , we decrease the number of data copy by reusing the backup data. Also, our on-line scaling operation can be processed parallel by selecting adequate nodes as new node. Our performance study shows that our method results in significant reduction in data copy time.     

An improved R-tree based on childnode''s probability

R-Tree is a good structure for spatial searching. But in this indexing structure,either the sequence of nodes in the same level or sequence of traveling these nodes when queries are made is random. Since the possibility that the object appears in different MBR which have the same parents node is different, if we make the subnode who has the most possibility be traveled first, the time cost will be decreased in most of the cases. In some case, the possibility of a point belong to a rectangle will shows direct proportion with the size of the rectangle. But this conclusion is based on an assumption that the objects are symmetrically distributing in the area and this assumption is not always coming into existence. Now we found a more direct parameter to scale the possibility and made a little change on the structure of R-tree, to increase the possibility of founding the satisfying answer in the front sub trees. We names this structure probability based arranged R-tree (PBAR-tree).     

An Index mechanism for multi-scale view in spatial databases

There are numerous geometric objects stored in the spatial databases. An importance function in a spatial database is that users can browse the geometric objects as a map efficiently. Thus the spatial database should display the geometric objects users concern about swiftly onto the display window. This process includes two operations:retrieve data from database and then draw them onto screen. Accordingly, to improve the efficiency, we should try to reduce time of both retrieving object and displaying them. The former can be achieved with the aid of spatial index such as R-tree, the latter require to simplify the objects. Simplification means that objects are shown with sufficient but not with unnecessary detail which depend on the scale of browse. So the major problem is how to retrieve data at different detail level efficiently. This paper introduces the implementation of a multi-scale index in the spatial database SISP (Spatial Information Shared Platform) which is generalized from R-tree. The difference between the generalization and the R-tree lies on two facets: One is that every node and geometric object in the generalization is assigned with a importance value which denote the importance of them, and every vertex in the objects are assigned with a importance value,too. The importance value can be use to decide which data should be retrieve from disk in a query. The other difference is that geometric objects in the generalization are divided into one or more sub-blocks, and vertexes are total ordered by their importance value. With the help of the generalized R-tree, one can easily retrieve data at different detail levels.Some experiments are performed on real-life data to evaluate the performance of solutions that separately use normal spatial index and multi-scale spatial index. The results show that the solution using multi-scale index in SISP is satisfying.     

Integrating GIS Web services based on mediating architecture

The geographic information service is enabled by the advancements in general Web service technology and the focused efforts of the OGC in defining XML-based Web GIS service. Based on these models, this paper addresses the issue of services chaining,the process of combining or pipelining results from several interoperable GIS Web Services to create a customized solution. This paper presents a mediated chaining architecture in which a specific service takes responsibility for performing the process that describes a service chain. We designed the Spatial Information Process Language (SIPL) for dynamic modeling and describing the service chain, also a prototype of the Spatial Information Process Execution Engine (SIPEE) is implemented for executing processes written in SIPL. Discussion of measures to improve the functionality and performance of such system will be included.