汉滩病毒M,S基因不同拼接方式原核表达效果比较研究

为了比较汉滩病毒囊膜糖蛋白G1与核蛋白(NP)主要抗原位点片段不同拼接方式的原核表达效果，将汉滩病毒76—118株M基因编码G1的片段与S基因编码区5’端约O．7kb的片段连接，克隆入pGEX一4T2，构建嵌合基因原核表达栽体pGEX-4T2-G1S0．7，pGEX-4T2-S0．7G1，在大肠杆菌XLl一Blue中诱导表达GST—G1S0．7或GST—S0．7G1融合蛋白。经IPTG诱导后，ELISA活性测定结果表明，两种融合蛋白均可与抗汉坦病毒NP的mAb特异性结合，融合蛋白GST—G1S0．7还可与抗汉滩病毒糖蛋白的mAb特异性结合。Western blot结果显示，诱导出G1S0．7或S0．7G1与GST的融合蛋白，其中G1S0．7嵌合基因的表达产物降解较少。研究证明：两种拼接方式的嵌合基因均可在大肠杆菌中表达出有生物学活性的融合蛋白，但表达效果不同，为汉滩病毒基因工程疫苗的研究奠定了基础。     

汉滩病毒S基因0.7kb片段与M基因G2片段不同拼接方式嵌合基因原核表达产物的初步比较

比较汉滩病毒S、M基因部分片段的嵌合基因不同拼接方式表达产物的活性。构建了嵌合基因原核表达载体pGEX-4T-1-S0.7G2,并与已构建的pGEX-4T-1-G2S0.7的诱导表达产物进行了比较。结果表明,融合蛋白同时保持亲本蛋白的结合活性,且前者表达产物的结合活性始终比后者低。研究表明,嵌合基因的不同拼接方式对融合蛋白的活性可能有一定的影响。     

汉滩病毒嵌合基因G2S0.7重组腺病毒免疫学特性研究

对汉滩病毒糖蛋白 (GP)和核蛋白 (NP)的嵌合基因G2S0 .7重组腺病毒的免疫学特性进行研究。将汉滩病毒含有G2S0 .7嵌合基因的重组腺病毒直接免疫Balb/c小鼠 ,用ELISA、微量细胞培养中和实验及淋巴细胞增殖实验检测免疫应答效果 ,以研究嵌合基因的免疫效果。结果用该重组腺病毒免疫的小鼠 ,可诱导产生抗汉滩病毒NP及GP特异性的抗体 ,抗体效价分别为 1 :1 6 0及 1 :2 0。同时重组腺病毒还可刺激机体产生低水平的中和抗体和明确的淋巴细胞增殖反应。说明汉滩病毒嵌合基因G2S0 .7重组腺病毒 ,既可刺激机体产生特异性的抗汉滩病毒体液免疫应答 ,也可刺激机体产生特异性的细胞免疫应答 ,本研究为汉滩病毒基因工程疫苗的研究奠定了实验基础     

汉坦病毒G1S0.7嵌合基因真核载体的构建及表达

构建含汉坦病毒嵌合基因G1S0.7的真核重组质粒,并在真核细胞中有效表达.从本室前期构建并经测序的重组质粒pShuttle-G1S0.7上双酶切回收得到片段G1S0.7后,克隆入真核表达载体pVAX,并将其通过脂质体介导转染HEK293细胞,表达产物用ELISA和Western-blot进行鉴定.酶切鉴定结果表明,成功构建了含汉坦病毒嵌合基因G1S0.7的重组质粒pVAX-G1S0.7; ELISA检测结果和Western-blot结果显示,汉坦病毒G1S0.7嵌合基因在HEK293细胞中得到了表达,所表达的融合蛋白分子量约90kD,与预期大小一致,并且表达产物可与抗汉坦病毒NP mAb特异性结合.说明所构建的表达载体可在真核细胞中表达出与汉坦病毒抗体有特异性结合活性的融合蛋白,为下一步基因免疫及进一步筛选HFRS基因疫苗候选组分提供实验依据.     

汉滩病毒嵌合基因 G150.7 重组腺病毒免疫学特性研究

对本室已构建的汉滩病毒糖蛋白(GP)和核蛋白(NP)的嵌合基因GlS0.7重组腺病毒的免疫学特性进行研究.将汉滩病毒含有G1S0.7嵌合基因的重组腺病毒直接免疫Balb/c小鼠,用ELISA、微量细胞培养中和实验及淋巴细胞增殖实验检测小鼠的免疫应答效果.用该重组腺病毒免疫的小鼠,可诱导产生抗汉滩病毒NP及GP特异性的抗体,抗体效价分别为1:320及1:40.同时重组腺病毒还可刺激机体产生低水平的中和抗体和明确的淋巴细胞增殖反应.说明所构建的汉滩病毒嵌合基因G150.7重组腺病毒,可同时刺激机体产生特异性的抗汉滩病毒体液免疫应答及细胞免疫应答.     

水稻黑条矮缩病毒基因组组分10编码的外壳蛋白基因的克隆及表达

从我国山东发病的玉米材料中提取水稻黑条矮缩病毒 ,抽提病毒RNA ,经RT PCR ,克隆了编码外层外壳蛋白的基因组组分 10 (S10 )的cDNA ,并进行了序列测定 .与已报道的日本株和湖北等地的S10进行了序列同源性比较 .结果表明 ,与日本株的同源性为 92 % ,与湖北等地的同源性在 97%～ 98%之间 .将该序列构建到pGEX 3X表达载体中 ,经IPTG诱导 ,表达了分子质量约为 76ku的GST融合蛋白 .经亲和层析纯化和Western印迹分析 ,证实了该基因以可溶性的GST融合蛋白形式在原核中表达 .     

高浓度c—Myc羧基端的体外自身二聚体化活性

将编码人c-myc羧基端bHLH／LZ结构域的92个氨基酸的cDNA片段（c-myc-c92）对框插入pGEX－2T原核表达载体中,使之与谷胱甘肽转移酶（GST）编码基因融合,并将重质粒导入大肠杆菌BL21（DE3）中,由IPTG诱导融合基因高效表达,并用Glutathione Sepharose4B亲和柱纯化融合蛋白GST－c-Myc-c92,凝胶阻滞（EMSA）分析显示该纯化蛋白能与CACGTG序列特异结合,并且只有高浓度的GST－c-Myc-c92才能与探针结合,结果表明在体上情况下高浓度c-Myc羟基端能自身二聚体化,此发现丰富了Myc-Max-Mad的调控网络,并为进一步研究c-myc的功能和调控提供了一定的线索。     

降钙素基因相关肽衍生物的制备及降血压功能研究

用PCR法将人的降钙素基因相关肽(calcitonin gene related—peptide,CGRP)基因克隆到表达载体pGEX-4T-2的GST基因后,构建成一个新的表达质粒pGEX—CGRP．另外分别将2个有降压功能的小肽HHL和RPLKPW的基因克隆到CGRP基因后,构建成2个表达质粒pGEX—CGRP-3AA和pGEX—CGRP-6AA．将此3个表达质粒转化到大肠杆菌TG1中,获得3个高表达的融合蛋白：GST—CGRP,GST—CGRP—HHL,GST—CGRP—RPLKPW;通过G1utathione Sepharose 4B亲和层析纯化融合蛋白,测定蛋白浓度,利用自发性高血压大鼠(spontaneously hypertensive rat,SHR)来检测蛋白的降血压功能,发现融合蛋白GST—CGRP—HHL具有显著的降压效果,能使舒张压下降8．0kPa,且降压维持时间延长,达到70min以上．     

水稻小GTP蛋白OsRab5A的表达、纯化和GTP结合分析

小GTP结合蛋白是一类在细胞内的运输过程中重要作用的蛋白。它们通过结合子GTP而激活 ,当GTP被水解为GDP后处于非活性状态。哺乳动物中的研究表明 ,Rab5A蛋白是细胞内的形成早期内吞体 (earlyendosome)的限速因子。证实了所克隆的水稻rab5A基因编码的蛋白具有GTP结合功能。将Osrab5A基因的编码序列按正确读码框重组到pGEX4T1载体中 ,转化大肠杆菌BL2 1(DE3) ,电泳判定插入片段大小无误后 ,进一步测序鉴定其读码也无误。将该克隆命名为pG_5AE。以IPTG诱导 pG_5AE所编码的融合蛋白GST_OsRab5A的表达。SDS_PAGE电泳与无外源质粒和表达谷胱甘肽硫转移酶 (GST)的对照相比 ,得到了预计大小的融合蛋白。以GSTrapTM亲和柱纯化融合蛋白。在不同的泳道分离纯化的融合蛋白和作为对照的含GST以及无外源蛋白的细菌总蛋白 ,电转移到硝酸纤维膜上。将该膜与α_3 2 PGTP温育 ,洗膜 ,放射自显影后 ,获得了融合蛋白结合GTP的结果 ,这表明在原核中表达出的水稻Rab5A蛋白能在体外结合GTP。     

Characterization of Ordovician carbonate reservoirs, southeastern Saskatchewan, Canada

The discovery of the prolific Ordovician Red River reservoirs in 1995 in southeastern Saskatchewan was the catalyst for extensive exploration activity which resulted in the discovery of more than 15 new Red River pools. The best yields of Red River production to date have been from dolomite reservoirs. Understanding the processes of dolomitization is, therefore, crucial for the prediction of the connectivity, spatial distribution and heterogeneity of dolomite reservoirs.The Red River reservoirs in the Midale area consist of 3～4 thin dolomitized zones, with a total thickness of about 20 m, which occur at the top of the Yeoman Formation. Two types of replacement dolomite were recognized in the Red River reservoir: dolomitized burrow infills and dolomitized host matrix. The spatial distribution of dolomite suggests that burrowing organisms played an important role in facilitating the fluid flow in the backfilled sediments. This resulted in penecontemporaneous dolomitization of burrow infills by normal seawater. The dolomite in the host matrix is interpreted as having occurred at shallow burial by evaporitic seawater during precipitation of Lake Almar anhydrite that immediately overlies the Yeoman Formation. However, the low δ18O values of dolomited burrow infills (-5.9‰～ -7.8‰, PDB) and matrix dolomites (-6.6‰～ -8.1‰, avg. -7.4‰ PDB) compared to the estimated values for the late Ordovician marine dolomite could be attributed to modification and alteration of dolomite at higher temperatures during deeper burial, which could also be responsible for its 87Sr/86Sr ratios (0.7084～0.7088) that are higher than suggested for the late Ordovician seawaters (0.7078～0.7080). The trace amounts of saddle dolomite cement in the Red River carbonates are probably related to "cannibalization" of earlier replacement dolomite during the chemical compaction.     

A computer generator for randomly layered structures

AcomputergeneratorforrandomlylayeredstructuresYUJia shun1,2,HEZhen hua2(1.TheInstituteofGeologicalandNuclearSciences,NewZealand;2.StateKeyLaboratoryofOilandGasReservoirGeologyandExploitation,ChengduUniversityofTechnology,China)Abstract:Analgorithmisintrod…     

海南岛地体及其毗邻陆缘晚中生代—新生代古地磁研究和构造演化

本文叙述了对海南岛及其毗邻大陆边缘白垩纪到第四纪地层岩石进行古地磁研究的全部工作过程。通过分析岩石中剩余磁矢量的磁偏角及磁倾角的变化,提出海南岛白垩纪以来经历的构造演化模式如下:早期伴随顺时针旋转而向南迁移,后期伴随逆时针转动并向北运移。联系该地区及邻区的地质、地球物理资料,对海南岛上述的构造地体运动提出以下认识:北部湾内早期有一拉张作用,主要是该作用使湾内地壳显著伸长减薄,形成北部湾盆地。从而导致了海南岛的早期构造运动,而海南岛后期的构造运动则主要是受南海海底扩张的影响。海南地体运动规律的阐明对于了解北部湾油气盆地的形成演化有重要的理论和实际意义。     

Exciton Seebeck in Molecular Systems

Various applications relevant to the exciton dynamics,such as the organic solar cell,the large-area organic light-emitting diodes and the thermoelectricity,are operating under temperature gradient.The potential abnormal behavior of the exicton dynamics driven by the temperature difference may affect the efficiency and performance of the corresponding devices.In the above situations,the exciton dynamics under temperature difference is mixed with     

Achieving Unusual States of Matter Under High Pressure

The elongation method,originally proposed by Imamura was further developed for many years in our group.As a method towards O(N)with high efficiency and high accuracy for any dimensional systems.This treatment designed for one-dimensional(ID)polymers is now available for three-dimensional(3D)systems,but geometry optimization is now possible only for 1D-systems.As an approach toward post-Hartree-Fock,it was also extended to     

《Chinese Science Bulletin》SUBJECT INDEX TO VOLUME 59(2014)

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An on-line scaling method for improving scalability of a database cluster

The explosive growth of the Internet and database applications has driven database to be more scalable and available, and able to support on-line scaling without interrupting service. To support more client's queries without downtime and degrading the response time, more nodes have to be scaled up while the database is running. This paper presents the overview of scalable and available database that satisfies the above characteristics. And we propose a novel on-line scaling method. Our method improves the existing on-line scaling method for fast response time and higher throughputs. Our proposed method reduces unnecessary network use, i.e. , we decrease the number of data copy by reusing the backup data. Also, our on-line scaling operation can be processed parallel by selecting adequate nodes as new node. Our performance study shows that our method results in significant reduction in data copy time.     

An improved R-tree based on childnode''s probability

R-Tree is a good structure for spatial searching. But in this indexing structure,either the sequence of nodes in the same level or sequence of traveling these nodes when queries are made is random. Since the possibility that the object appears in different MBR which have the same parents node is different, if we make the subnode who has the most possibility be traveled first, the time cost will be decreased in most of the cases. In some case, the possibility of a point belong to a rectangle will shows direct proportion with the size of the rectangle. But this conclusion is based on an assumption that the objects are symmetrically distributing in the area and this assumption is not always coming into existence. Now we found a more direct parameter to scale the possibility and made a little change on the structure of R-tree, to increase the possibility of founding the satisfying answer in the front sub trees. We names this structure probability based arranged R-tree (PBAR-tree).     

An Index mechanism for multi-scale view in spatial databases

There are numerous geometric objects stored in the spatial databases. An importance function in a spatial database is that users can browse the geometric objects as a map efficiently. Thus the spatial database should display the geometric objects users concern about swiftly onto the display window. This process includes two operations:retrieve data from database and then draw them onto screen. Accordingly, to improve the efficiency, we should try to reduce time of both retrieving object and displaying them. The former can be achieved with the aid of spatial index such as R-tree, the latter require to simplify the objects. Simplification means that objects are shown with sufficient but not with unnecessary detail which depend on the scale of browse. So the major problem is how to retrieve data at different detail level efficiently. This paper introduces the implementation of a multi-scale index in the spatial database SISP (Spatial Information Shared Platform) which is generalized from R-tree. The difference between the generalization and the R-tree lies on two facets: One is that every node and geometric object in the generalization is assigned with a importance value which denote the importance of them, and every vertex in the objects are assigned with a importance value,too. The importance value can be use to decide which data should be retrieve from disk in a query. The other difference is that geometric objects in the generalization are divided into one or more sub-blocks, and vertexes are total ordered by their importance value. With the help of the generalized R-tree, one can easily retrieve data at different detail levels.Some experiments are performed on real-life data to evaluate the performance of solutions that separately use normal spatial index and multi-scale spatial index. The results show that the solution using multi-scale index in SISP is satisfying.     

Integrating GIS Web services based on mediating architecture

The geographic information service is enabled by the advancements in general Web service technology and the focused efforts of the OGC in defining XML-based Web GIS service. Based on these models, this paper addresses the issue of services chaining,the process of combining or pipelining results from several interoperable GIS Web Services to create a customized solution. This paper presents a mediated chaining architecture in which a specific service takes responsibility for performing the process that describes a service chain. We designed the Spatial Information Process Language (SIPL) for dynamic modeling and describing the service chain, also a prototype of the Spatial Information Process Execution Engine (SIPEE) is implemented for executing processes written in SIPL. Discussion of measures to improve the functionality and performance of such system will be included.