甜菜夜蛾核多角体病毒基因组13.7～21.6 m.u.区域的分析

甜菜夜蛾核多角体病毒(Spodoptera exigua multicapsid nucleopolyhedrovirus,SeMNPV)基因组13．7～21．6m．u．区域是SeMNPV的重组热点区。以SeMNPV美国分离株SeUS1为模板,长片段PCR对SeUS1的13．7～21．6m．u．区域扩增,得到11．3kb,2．0kb和0．7kb3个片段。对照已发表的SeMNPV基因组序列,11．3kb片段是具完整SeMNPV序列基因型的产物,2.0kb和0．7kb片段表明SeUS1中还存在两种缺失突变株。对2．0kb和0．7kb片段的序列分析揭示了这两株突变株在缺失部位的DNA一级结构。对三株重组SeMNPV病毒(SeXDl、SeXD2和SeXD3)的分析发现,它们和野生型病毒SeUS1中的一个基因型一样,均缺失了SeMNPV nt 18513～29105之间长10593bp的片段,暗示SeUS1中一株自发形成的缺失突变体在离体细胞中具有复制优势。将该片段基因排列与其它10种基因组序列已测定的杆状病毒比较,发现两个在GroupⅡ NPVs中保守的基因簇。最大简约性法对部分基因的系统发育分析表明,缺失片段中某些基因可能存在于杆状病毒分化之前的病毒基因组中。     

耐热碱性磷酸酯酶基因的DNA序列分析

从栖热菌中克隆到产耐热碱性磷酸酯酶（FD－TAP）基因并进行了DNA序列分析,结果表明此2．0kb的片段含有一个1056bp的开放阅读框,编码501个氨基酸的蛋白质,其N端有一26个氨基酸的信号肽．在起始密码子的上游5bp处有一个5＇－GGAGGT－3＇的SD序列．基因编码区的（G＋C）％为68．7％,第3位密码子（G＋C）％为92．7％．FD－TAP的氨基酸序列与大肠杆菌等生物的碱性磷酸酯酶氨基酸序列比较,相同性为27％,相似性为38％．中央β－折叠区及与活性中心相关的氨基酸残基高度保守．表明FD－TAP具有与大肠杆菌碱性磷酸酯酶相似的结构和作用机制．在相当于大肠杆菌碱性磷酸酯酶的His370至His412两个金属离子结合部位之间,FD－TAP有一72个氨基酸的插入片段,提示该插入片段与FD－TAP的高耐热性相关．     

SpltNPVp49基因的克隆和序列分析

根据新发现的杆状病毒凋亡抑制基因ｐ４９基因的序列设计了一对引物,以ＳｐｌｔＮＰＶ基因组ＤＮＡ为模板,通过ＰＣＲ扩增获得了预期大小的约１．３ｋｂ的ＤＮＡ片段,将此片段克隆到ｐＧＥＭ－Ｔ载体上并直接测序。序列分析表明,该片段为ＳｐｌｔＮＰＶ完整的ｐ４９基因开放读码框。与已知的杆状病毒ｐ４９基因的序列同源性为８７％,与之对应的氨基酸序列的同源性高达９３％。它是首次从ＳｐｌｔＮＰＶ中克隆到的抑制细胞凋亡的     

中国对虾抗菌肽成熟肽的cDNA克隆

利用RT－PCR、嵌套PCR（Nested PCR)和3’－RACE等方法，从中国对虾血细胞中克隆到1种抗菌肽基因片段，称为中国对虾肽（Chp）基因。此基因片段长543bp，开读框共有156个碱基，编码52个氨基酸。该基因所编码的氨基酸序列对应于凡那对虾抗菌肽成熟肽的序列，与其一致性为52－59％，相似性为61－73％，分子量为5652．4Da，理论等电点为9．76，带正点荷的氨基酸（Arg-Lys）为8个，不含带负电荷的氨基酸。上述这些特征（分子量较小，带正点荷）均为抗菌肽的普遍特征。     

八肋游仆虫一个新β-微管蛋白基因的克隆与序列分析

从八肋游仆虫细胞中克隆到一种新的β-微管蛋白基因.序列分析结果表明:在大核中,该基因全长1561bp.与已经报道过的β-微管蛋白基因不同,它的5′端基因上游调控序列有49 bp,AT含量为75.5%.上游调控序列中仅有一个TATAA框,没有CCAAT框;该基因的3′端的下游调控序列有121 bp,富含AT碱基,达到86.8%,其中有明显的反向重复序列.上下游调控序列中各有一个断裂信号TTGAA和TTCAA,负责从小核到大核发育过程中大核染色体的形成.从小核基因组中克隆到相应的基因片段,比大核中的序列多7个碱基5′-CATGCTC-3′,其功能尚不清楚.序列比对表明,新的β-微管蛋白基因与已经报道的β-微管蛋白基因的同源性92.3%,阅读框中有2个氨基酸的变化,将它命名为β2-微管蛋白基因.     

中国棉铃虫多粒包埋型核多角体病毒几丁质酶基因的研究

中国棉铃虫多粒包埋型核多角体病毒VHA273毒株的几丁质酶基因的开放阅读框大小为1713bp，编码570个氨基酸残基，分子量约60kDa，氨基酸序列分析显示，杆状病毒与原核生物特别是细菌的几丁质酶具高度同源性，暗示杆状病毒的几丁质酶基因与细菌的几丁质酶基因有更为接近的讲化关系，可能源于共同的祖先。     

利用酵母双杂交系统筛选与BnSmD1相互作用的蛋白

本研究以油菜BnSmD1为诱饵蛋白,利用酵母双杂交技术,从甘蓝型油菜cDNA文库中筛选出与之有相互作用的Arf-GTP酶激活蛋白1(Brassica napus ADP-ribosylation factor GTPase activating protein1,BnArf GAP1),采用RT-PCR扩增并克隆到3个油菜Arf GAP基因的开放阅读框全长序列,BnArf GAP1、BnArf GAP2和BnArf GAP3.BnArf GAP1和BnArf GAP2都拥有1个507bp的开放阅读框,编码168个氨基酸残基;与前两个基因相比,BnArf GAP3核苷酸序列中插入了一个93bp的带有终止密码子的外源片段,导致翻译的提前终止,它拥有1个249bp的开放阅读框,编码82个氨基酸残基.BnArf GAP1和BnArf GAP2核苷酸序列一致性达到98.22％;BnArfGAP1与BnArf GAP3核苷酸序列一致性达到82.83％,BnArf GAP2与BnArf GAP3核苷酸序列一致性达到84.17％.BnArf GAP1、BnArf GAP2和BnArf GAP3都含有一个C2结构域.     

斜纹夜蛾核型多角体病毒日本株(C3)p10基因的克隆及序列分析

从斜纹夜蛾核多角体病毒(Spodoptera litura mukieapsid nucleopolyhedrovirus，Splt MNPV)日本株(C3)基因组中克隆了p10基因．核苷酸序列分析表明，该克隆片断涵盖了318bp的读码框及5’端启动子区191bp和3’端终止区62bp的序列．在起始密码子ATG上游-63～-59bp处有一杆状病毒晚期和晚晚期启动子基序TAAG．联配分析表明，Splt MNPV日本株(C3)的核苷酸序列和氨基酸序列与其它9种核多角体病毒的同源性有较大差异．以p10基因为基础绘制的杆状病毒分子进化树将家蚕核多角体病毒(Bombyx mori nuchopolyhedrovirus，BmNPV)与苜蓿丫纹夜蛾核多角体病毒(Autographa californica multicapcid nucleopolyhedrovirus，AcMNPV)归到同一分枝，这与以gp37基因和egt基因为基础绘制的杆状病毒分子进化树结果一致．     

水稻OsICK1基因克隆及其序列分析

细胞周期蛋白依赖性激酶抑制剂（ICK）是一种能够影响细胞生长和发育的重要调控蛋白．以水稻（9311）为材料，利用RT-PCR技术，扩增获得了1个新的可能为水稻细胞周期蛋白依赖性激酶抑制剂的基因，命名为OsICK1．核苷酸序列分析表明，该基因的开放阅读框为585bp，编码194个氨基酸．与Genbank中预测的水稻ICK基因序列（NM_196964）比对，两者同源性为79．84％；氨基酸序列分析表明，该基因氨基酸序列3＇端附近存在植物ICK所固有的保守序列，与玉米ICK1保守序列的同源性高达95．5％．     

neuritin基因杆状病毒表达载体的构建

为研究Neuritin蛋白的功能,将neuritinORF在杆状病毒-昆虫表达系统中表达,构建杆状病毒表达载体.以308D10为模板,利用PCR方法扩增neuritinORF,定向克隆法将其克隆至PFASTBAC-HTA转移载体中.然后利用同源重组原理将其转移至杆粒bacmid中.得到携带neuritin ORF的重组杆粒.本实验获得了重组目的基因真核表达载体并经PCR鉴定,插入片段方向、大小正确,DNA测序分析表明插入处接头和读框与预期序列相符,成功构建了Neuritin的杆状病毒表达载体.     

Sequencing of p35 gene fromHeliothis armigera polyhedrosis virus and its homologous comparison

Using p35 gene primers of AcNPV, about 1 kb fragment was obtained by PCR from HaNPV DNA and was sequenced thereafter. It has a full reading frame encode 299 amino acids. Sharing identity of 94% in nucleotides and 84% in predict amino-acids with AcNPV, a apoptosis inhibiting gene was found. According to comparison of p35 genes in five kinds of baculovirus, it is found that AcNPV, TnNPV and BmNPV share the most intimate blood relation. HaNPV is near the above three species. LsNPV is little remote from them. This result reconfirmed those we have done with gp37 genes and vp39 genes. It is more accurate to use conserved gene for species division than that of the serological identification. Biography: WANG Ye-fu(1962-), male, Ph D.     

甜菜夜蛾多核壳型核型多角体病毒vp39基因的克隆与表达

参照苜宿银纹夜蛾核型多角体病毒（AcMNPV)衣壳蛋白基因vp39的序列设计引物,采用PCR技术扩增了甜菜夜蛾核型多角体病毒的约1．3kb片段,通过将片段亚克隆至原核表达载体pET-28构建出重组表达质粒pET-Se39,以pET-Se39转化E.coli BL21。经IPTG诱导后,SeMNPVvp39基因高效表达,SDS－PAGE分析显示表达产物的分子量为39KD,并且表达量在IPTG诱导4h达到最高水平。／     

Nucleotide sequence of the rat skeletal muscle actin gene

The actins constitute a family of highly conserved proteins found in all eukaryotic cells. Their conservation through a very wide range of taxonomic groups and the existence of tissue-specific isoforms make the actin genes very interesting for the study of the evolution of genes and their controlling elements. On the basis of amino acid sequence data, at least six different mammalian actins have been identified (skeletal muscle, cardiac muscle, two smooth muscle actins and the cytoplasmic beta- and gamma-actins). Rat spleen DNA digested by the EcoRI restriction enzyme contains at least 12 different fragments with actin-like sequences but only one which hybridized, in very stringent conditions, with the skeletal muscle cloned cDNA probe. Here we describe the sequence of the actin gene in that fragment. The nucleotide sequence codes for two amino acids, Met-Cys, preceding the known N-terminal Asp of the mature protein. There are five small introns in the coding region and a large intron in the 5'-untranslated region. Comparison of the structure of the rat skeletal muscle actin gene with available data on actin genes from other organisms shows that while the sequenced actin genes from Drosophila and yeast have introns at different locations, introns located at codons specifying amino acids 41, 121, 204 and 267 have been preserved at least from the echinoderm to the vertebrates. A similar analysis has been done by Davidson. An intron at codon 150 is common to a plant actin gene and the skeletal muscle acting gene.     

Expression of the HTLV-III envelope gene by a recombinant vaccinia virus

The discovery that the aetiological agent of acquired immune deficiency syndrome (AIDS) is a retrovirus, referred to as human T-lymphotropic virus type III (HTLV-III) or lymphadenopathy-associated virus (LAV) (for review see ref. 1), has raised the possibility of developing a vaccine. In this regard, the envelope (env) proteins of murine retroviruses can induce protective immunity in mice. The HTLV-III env gene specifies a primary polypeptide of approximately 860 amino acids that is glycosylated to form a precursor of relative molecular mass (Mr) 160,000 (gp160), which gives rise to mature membrane-associated proteins of Mr 120,000 (gp120) and 41,000 (gp41). The HTLV-III env gene has been expressed in Escherichia coli and by simian virus 40 (SV40) vectors but formation of the authentic proteins has not been demonstrated. Here, we describe the expression of the complete env gene by a vaccinia virus vector. Evidence is presented that synthesis, glycosylation, processing and membrane transport of the env polypeptide occurred without other HTLV-III gene functions; the env protein was recognized by sera from unrelated AIDs patients; and a single vaccination with the infectious recombinant vaccinia virus induced antibodies to gp120 in mice.     

含抗HIV广谱中和抗体2F5、4E10靶基因载体的构建及鉴定

目的:构建含HIV gp120,gp41序列中广谱中和抗体2F5,4E10作用靶基因的载体并进行鉴定,为后期重组载体表达产物诱导产生中和抗体及抗HIV亚单位疫苗的研究奠定基础.方法:根据NCBI中HIV gp120,gp41基因序列中可与2F5、4E10结合的区域设计引物并进行PCR反应,将PCR得到的目的片段插入到载体pET28a中,对重组载体进行PCR鉴定、酶切鉴定及DNA测序.结果:PCR鉴定、酶切鉴定及DNA测序结果证实重组载体构建成功.结论:成功构建了含HIV gp120,gp41序列中广谱中和抗体2F5,4E10作用靶基因的载体.     

Identification of a form of the avian erythroblastosis virus erb-B gene product at the cell surface

Avian erythroblastosis virus (AEV) induces both erythroblastosis and fibrosarcoma in chickens. The viral oncogene responsible for these diseases, erb, is divided into two regions, erb-A and erb-B, although recent evidence suggests that it is primarily the erb-B gene product that is responsible for the transforming activity. The erb-B gene product has been reported previously to be a membrane glycoprotein of 68,000 molecular weight (MW), gp68erb -B. However, we show here that gp68erb -B is an intracellular precursor which is modified further to a 74,000 MW protein, gp74erb -B. By the criteria of resistance to digestion with endoglycosidase H, subcellular fractionation and inhibition of biosynthesis by the ionophore monensin, gp74erb -B appears to be located at the cell surface. Recently, a comparison of the erb-B sequence with that of the epidermal growth factor (EGF) receptor has shown that these two genes are highly homologous, and that erb-B appears to represent a truncated form of this growth factor. In light of these data the identification of gp74erb -B at the plasma membrane suggests that this may be the functionally important form of the erb-B gene product.     

Cloning of human cytokine signal transduction inhibitor genehumSOCS-2

An EST (gb/AA115239) with high identity to the mouse cytokine signal transduction inhibitor genemmSOCS-2 was selected in GenBank EST database by the homologous screening method. The cDNA with the same sequence of the EST was got in human placenta cDNA library by PCR and a 1011 bp cDNA fragment was selected using above cDNA as probes to perform walking hybridization in placenta cDNA library. The cDNA fragment contains one 594 bp open reading frame (ORF) which encodes 198 amino acid residues. It was proved to be novel after NCBl database screening. Homology comparison showed that this gene has 93% identity tommSOCS-2 at the amino acid level and it has high identities to other related genes in SH₂ domain and SOCS box, so it was namedhumSOCS-2 and the accession number in GenBank is gb/AF020590. The expression analysis showed that the gene is expressed obviously higher in prostate than in other 15 human tissues.     

BIV92044功能片段的克隆和序列分析

本文克隆了BIV92044毒株的RT段（位于pol基因2254nt～2497nt，编码病毒反转录酶）和env段（位于env基因6060nt～6683nt，编码外膜精蛋白gp100）序列，并对这两段克隆进行了序列分析，结果表明，BIV92044的上述两段与BIVR29的差异很小，序列同源性分别为99％和96％．     

百合无症病毒衣壳蛋白基因克隆和蛋白分析

根据已报道的LSV CP基因序列合成两条寡聚核苷酸引物,模板为感染LSV的百合叶片的总RNA,通过反转录-聚合酶链式反应(RT-PCR)扩增出大小为876bp的LSV CP基因,经测序后,对该基因编码区全长序列及相应的氨基酸序列用生物信息学软件系统进行序列分析及结构功能预测.结果表明:该基因由876个核苷酸组成,编码291个氨基酸;与GeneBank公布的其他LSV分离物的基因序列同源性为93.4%～99.0%,氨基酸同源性为84.8%～99.5%;它含有一个卷曲螺旋结构和多个磷酸化位点,平均疏水值为-0.432;含有Carlaviruses完整的衣壳蛋白保守结构域,二级结构以α-螺旋和无规则卷曲为主.