一个麻疯树C2H2型锌指蛋白基因JcZFP1的克隆与表达分析

从麻疯树胚乳cDNA文库中克隆得到一个C2H2型锌指蛋白基因,JcZFP1,全长931bp,开放阅读框全长735bp,编码244个氨基酸残基,等电点pI=7.0,分子量PA=27.38kD.C2H2型锌指结构位于第81至103个氨基酸残基中,包括植物锌指蛋白特有的保守氨基酸序列QALGGH.在该基因的顺式作用元件上发现了与生长发育和逆境胁迫相关的启动元件.荧光定量PCR(qPCR)检测发现,JcZFP1基因在麻疯树各器官中的表达量依次为:绿果皮花叶根茎种仁,且幼嫩器官表达量高于成熟器官;对麻疯树幼苗进行低温、干旱胁迫时,JcZFP1基因的表达量明显增加,表明该基因可能在麻疯树的生长发育及逆境胁迫应答过程中起重要作用.     

麻疯树胚乳ESTs序列的克隆和生物信息学初步分析

基于Linux操作系统,利用Phrap/Consed、cross_match、blast等软件和自主开发程序,构建了批量ESTs序列的检测系统,对麻疯树胚乳cDNA文库部分测序结果进行生物信息学分析,包括载体序列的去除、序列格式的转换、重复序列鉴定、序列的同源性比对、GO生物学过程以及GO细胞组分分类.     

棉花腺体形成时均一化cDNA文库的构建

为克隆筛选棉花腺体形成相关的基因，运用SMART技术构建cDNA文库.首先抽提棉花腺体形成时期的mRNA，mRNA逆转录后合成cDNA，经均一化处理后，SfiⅠ酶切，连接质粒载体，电转化，成功构建了棉花腺体形成时期的cDNA文库.经鉴定原始文库滴度为5.8×105 cfu/mL，其重组率高达94%，插入片段的平均长度约为1.4 kb.     

麻疯树(Jatropha curcas)毒蛋白curcin基因家族成员的分离和描述

麻疯树curcin基因家族中4个成员通过PCR扩增被分离．它们都不合有内含子，序列分析表明它们编码Ⅰ型核糖体失活蛋白（Ribosome-Inactivating Proteins，RIPs），证明curcin基因如同大多数RIPs一样由多基因家族编码．四个curcin基因家族成员和另两个已知curcin基因家族成员的开放阅读框（Open Reading Frame，ORF）的序列比对结果显示curcin基因家族成员至少可分为两个亚类群，亚类群之间的氨基酸序列相似性低于88％．分别将这4个curcin基因家族成员命名为curA2、curA3、curB2、curB3．对四条基因启动子区和ORF生物信息学分析推测CurB2、curB3可能是被真菌及逆境诱导的curcin基因家族成员全长，而curA2、curA3可能是麻疯树胚乳贮存的curcin基因家族成员全长．Southern杂交结果显示，麻疯树基因组中至少有3个以上curcin基因家族成员．     

麻疯树亚硝基谷胱甘肽还原酶（JcGSNOR）的克隆与功能分析

本研究克隆出了麻疯树亚硝基谷胱甘肽还原酶（JcGSNOR）cDNA的全长序列,并分析了其在麻疯树各部位中的表达情况.结果表明,在所有参试的器官中,JcGSNOR基因皆有表达,其中在种子种表达量最大,其次为根茎,叶表达量最少.对新基因编码蛋白的理化性质进行分析后发现JcGSNOR的分子量约为40.256 kDa,等电点约为6.74;同源性分析表明,JcGSNOR基因与其它植物GSNOR基因核甘酸序列相似度达到80%以上,说明JcGSNOR是GSNOR蛋白家族的一个新发现的成员.同时将JcGSNOR基因与pY     

麻疯树基因JcKNOX1的克隆和表达调控分析

KNOX同源异型盒基因在植物生长发育中扮演着极其重要的角色,首次从大戟科植物麻疯树cDNA中克隆到一个同源异型盒基因,命名为JcKNOX1.其开放阅读框全长693bp,编码230个氨基酸残基,预测蛋白质等电点pI=6.13,分子量PA=25.92kD.聚类分析表明,JcKNOX1与毛白杨在进化上具有最近的亲缘关系,其次是甜橙.荧光定量PCR检测发现,JcKNOX1基因在麻疯树植株各个器官中均有表达,幼嫩部位表达量明显高于成熟器官,表达量依次为:茎尖嫩叶茎叶花叶柄根;对麻疯树幼苗进行ABA和低温胁迫发现,JcKNOX基因表达量明显增加.上游调控元件预测分析表明,该基因可能在麻疯树光调节、激素调控、花粉基因特异性表达、逆境调控等重要生物学过程中具有重要作用.     

厚壳贻贝足腺cDNA文库的构建及部分EST序列分析

为获得厚壳贻贝足腺组织的EST序列标签以及可能的功能基因序列,以pCMVsport6质粒为载体构建了高质量的厚壳贻贝足腺组织cDNA文库,文库滴度为1.31×107pfu/mL,重组率为98%,平均插入片段为1.3kb.通过对文库部分克隆的序列测定,获得了11个新基因和17个功能基因,其中包括部分与厚壳贻贝足丝相关的基因.厚壳贻足腺组织cD-NA文库的成功构建为将来筛选与厚壳贻贝足丝蛋白相关的新基因,系统研究其黏附机制奠定了基础.     

麻疯树外植体愈伤组织中毒蛋白的Westem-blot鉴定

麻疯树(Jatropha curcas L.)系大戟科麻疯树属植物，耐干旱贫瘠，抗病虫能力强，主要生长在热带和亚热带地区，在我国西南地区有丰富的资源．麻疯树种子对整体动物，如小白鼠、羊及人，特别是幼儿表现出一定的毒性，且具有致死作用，麻疯树种子含毒成分主要是种子毒蛋白(curcin)，该蛋白是一种单链核糖体失活蛋白，具抗癌活性，是一种具开发成为新型抗癌药物潜力的蛋白．本文报道用组织培养的方法，从胚乳愈伤组织中可以获得此毒蛋白，为以后毒蛋白的进一步开发应用提供一定的基础。     

中国美利奴羊外周免疫器官cDNA文库的构建及鉴定

为了筛选中国美利奴羊与免疫反应相关的的功能基因并研究这些基因的功能,构建了以美利奴羊外周免疫器官的cDNA文库。通过提取总RNA,分离纯化mRNA并以其为模版参照ZAP Express cDNA Synthesis Kit说明书构建cDNA文库。结果表明:该文库初级库容达到了3.28×105pfu,扩增库滴度为3.8×108pfu/mL,重组率为97.7%。插入片段介于0.5至2.3 kb之间,平均大小为1.5 kb。该文库的成功构建为后续研究奠定了分子基础。     

An Index mechanism for multi-scale view in spatial databases

There are numerous geometric objects stored in the spatial databases. An importance function in a spatial database is that users can browse the geometric objects as a map efficiently. Thus the spatial database should display the geometric objects users concern about swiftly onto the display window. This process includes two operations:retrieve data from database and then draw them onto screen. Accordingly, to improve the efficiency, we should try to reduce time of both retrieving object and displaying them. The former can be achieved with the aid of spatial index such as R-tree, the latter require to simplify the objects. Simplification means that objects are shown with sufficient but not with unnecessary detail which depend on the scale of browse. So the major problem is how to retrieve data at different detail level efficiently. This paper introduces the implementation of a multi-scale index in the spatial database SISP (Spatial Information Shared Platform) which is generalized from R-tree. The difference between the generalization and the R-tree lies on two facets: One is that every node and geometric object in the generalization is assigned with a importance value which denote the importance of them, and every vertex in the objects are assigned with a importance value,too. The importance value can be use to decide which data should be retrieve from disk in a query. The other difference is that geometric objects in the generalization are divided into one or more sub-blocks, and vertexes are total ordered by their importance value. With the help of the generalized R-tree, one can easily retrieve data at different detail levels.Some experiments are performed on real-life data to evaluate the performance of solutions that separately use normal spatial index and multi-scale spatial index. The results show that the solution using multi-scale index in SISP is satisfying.     

Characterization of Ordovician carbonate reservoirs, southeastern Saskatchewan, Canada

The discovery of the prolific Ordovician Red River reservoirs in 1995 in southeastern Saskatchewan was the catalyst for extensive exploration activity which resulted in the discovery of more than 15 new Red River pools. The best yields of Red River production to date have been from dolomite reservoirs. Understanding the processes of dolomitization is, therefore, crucial for the prediction of the connectivity, spatial distribution and heterogeneity of dolomite reservoirs.The Red River reservoirs in the Midale area consist of 3～4 thin dolomitized zones, with a total thickness of about 20 m, which occur at the top of the Yeoman Formation. Two types of replacement dolomite were recognized in the Red River reservoir: dolomitized burrow infills and dolomitized host matrix. The spatial distribution of dolomite suggests that burrowing organisms played an important role in facilitating the fluid flow in the backfilled sediments. This resulted in penecontemporaneous dolomitization of burrow infills by normal seawater. The dolomite in the host matrix is interpreted as having occurred at shallow burial by evaporitic seawater during precipitation of Lake Almar anhydrite that immediately overlies the Yeoman Formation. However, the low δ18O values of dolomited burrow infills (-5.9‰～ -7.8‰, PDB) and matrix dolomites (-6.6‰～ -8.1‰, avg. -7.4‰ PDB) compared to the estimated values for the late Ordovician marine dolomite could be attributed to modification and alteration of dolomite at higher temperatures during deeper burial, which could also be responsible for its 87Sr/86Sr ratios (0.7084～0.7088) that are higher than suggested for the late Ordovician seawaters (0.7078～0.7080). The trace amounts of saddle dolomite cement in the Red River carbonates are probably related to "cannibalization" of earlier replacement dolomite during the chemical compaction.     

A computer generator for randomly layered structures

AcomputergeneratorforrandomlylayeredstructuresYUJia shun1,2,HEZhen hua2(1.TheInstituteofGeologicalandNuclearSciences,NewZealand;2.StateKeyLaboratoryofOilandGasReservoirGeologyandExploitation,ChengduUniversityofTechnology,China)Abstract:Analgorithmisintrod…     

Perspherical Approaches for Electrons in Atoms and Charged Excitons in Quantum Wells

Instead of following Fock’s expansion,we solve the Schrodinger equation for some quantum mechanical manybody systems such as electrons in atoms and charged excitons in quantum wells in a similar way in hyperspherical coordinates by expanding the wave functions into orthonormal complete basis sets of the hyperspherical hannonics(HHs)of hyperangles and generalized Laguerre polynomials(GLPs)of the hyperradius.This leads the equation to     

Advances in broadband wireless communications under high-mobility scenarios

Future mobile communication systems aim at providing very high data transmission rates, even in high-mobility scenarios such as high-speed wheel-track trains, maglev trains, highway vehicles, airplanes, guided missiles or spacecraft. A particularly important commercial application is the strong and increasing worldwide demand for high- speed broadband wireless communications （up to 574.8 km/ h test speeds or 380 km/h commercial speeds） in railways, providing data, voice and video services for applications such as onboard entertainment services to passengers, train control, train dispatch, train sensor status handling and sur- veillance. In such high-mobility scenarios, there are a number of communication challenges, including fast hand- over, location updating, high-speed channel modeling, estimation and equalization, anti-Doppler spreading tech- niques, fast power control, and dedicated network architec- ture. Because signal transmission in very high-speed scenarios will inevitably experience serious deterioration, it is imperative to develop key broadband mobile communi- cation techniques for such high-speed vehicles.     

Wuhan University Journal of Natural Sciences TOTAL CONTENTS

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海南岛地体及其毗邻陆缘晚中生代—新生代古地磁研究和构造演化

本文叙述了对海南岛及其毗邻大陆边缘白垩纪到第四纪地层岩石进行古地磁研究的全部工作过程。通过分析岩石中剩余磁矢量的磁偏角及磁倾角的变化,提出海南岛白垩纪以来经历的构造演化模式如下:早期伴随顺时针旋转而向南迁移,后期伴随逆时针转动并向北运移。联系该地区及邻区的地质、地球物理资料,对海南岛上述的构造地体运动提出以下认识:北部湾内早期有一拉张作用,主要是该作用使湾内地壳显著伸长减薄,形成北部湾盆地。从而导致了海南岛的早期构造运动,而海南岛后期的构造运动则主要是受南海海底扩张的影响。海南地体运动规律的阐明对于了解北部湾油气盆地的形成演化有重要的理论和实际意义。     

Scale-based spatial data model for GIS

Being the primary media of geographical information and the elementary objects manipulated, almost all of maps adopt the layer-based model to represent geographic information in the existent GIS. However, it is difficult to extend the map represented in layer-based model. Furthermore, in Web-Based GIS, It is slow to transmit the spatial data for map viewing. In this paper, for solving the questions above, we have proposed a new method for representing the spatial data. That is scale-based model. In this model we represent maps in three levels: scale-view, block, and spatial object, and organize the maps in a set of map layers, named Scale-View, which associates some given scales.Lastly, a prototype Web-Based GIS using the proposed spatial data representation is described briefly.     

Exciton Seebeck in Molecular Systems

Various applications relevant to the exciton dynamics,such as the organic solar cell,the large-area organic light-emitting diodes and the thermoelectricity,are operating under temperature gradient.The potential abnormal behavior of the exicton dynamics driven by the temperature difference may affect the efficiency and performance of the corresponding devices.In the above situations,the exciton dynamics under temperature difference is mixed with     

Achieving Unusual States of Matter Under High Pressure

The elongation method,originally proposed by Imamura was further developed for many years in our group.As a method towards O(N)with high efficiency and high accuracy for any dimensional systems.This treatment designed for one-dimensional(ID)polymers is now available for three-dimensional(3D)systems,but geometry optimization is now possible only for 1D-systems.As an approach toward post-Hartree-Fock,it was also extended to