Long R^3-IGF-Ⅰ的克隆表达

在重组质粒pExSecI-IGF-Ⅰ的基础上,采用基因克隆方法合成了长链人胰岛素样生长因子(Long R3-IGF-Ⅰ)基因序列,构建基于该基因的重组原核表达质粒.将重组质粒转入E.coli,并对其表达条件进行了优化.实验结果表明,在37 ℃,IPTG终浓度0.6 mmol/L,诱导3 h条件下,Long R3-IGF-Ⅰ以包涵体形式可得到高效表达.将包涵体变性溶解后通过分离纯化,目的蛋白纯度达到95%以上.通过尿素梯度透析复性法对变性包涵体复性,复性率达到66%.     

人细胞周期蛋白D1在大肠杆菌BL21中的表达及纯化

将人细胞周期蛋白D1全长cDNA克隆入原核表达载体pET-28c(+)中, 经酶切和测序鉴定正确的重组质粒转化E.coli BL21(DE3)后获得表达菌株. 该菌株经IPTG诱导高效表达出带有组氨酸标签的以包涵体形式存在的融合蛋白, 表达量占菌体总蛋白的23%. 包涵体经洗涤和溶解， 在变性条件下利用Ni²⁺螯合柱纯化、 尿素梯度复性后， 得到纯度达98%以上的纯化蛋白. SDS-PAGE显示纯化蛋白的分子量约为43 ０００， Western-b lot分析表明， 在相应分子量处有一特异性条带， 说明成功表达和纯化重组人细胞周期蛋白D1.     

人P53的原核表达及包涵体复性研究

通过检测血清中p53蛋白及其抗体变化诊断肿瘤的ELISA试剂盒的研发需要大量制备p53蛋白.本研究通过构建人野生型p53基因的原核表达质粒pET-32a-p53,在大肠杆菌中诱导表达得到p53包涵体蛋白,经包涵体变性、亲和纯化、复性得到可溶p53蛋白.发现利用8M尿素对包涵体进行变性溶解,经镍柱亲和纯化得到纯度超过95%的变性蛋白.尝试透析复性、稀释复性和柱上复性3种方法分别对p53变性蛋白进行复性.结果表明透析复性的复性率最高,这为原核表达制备p53提供了一种参考.本研究为ELISA法检测血清中p53蛋白及其抗体诊断肿瘤相关试剂盒研发奠定了基础.     

rhBMP-2m大规模制备纯化过程中使用尿素的分析

为大规模制备rhBMP-2m,将高表达rhBMP-2m的工程菌株进行高密度发酵、温度诱导表达,收集菌体,经裂菌和超声洗涤得到并纯化的包涵体。洗涤后的包涵体中,rhBMP-2mdi蛋白量的75．1％。为获得高纯度的rhBMP-2m,采用尿素作变性剂将包涵体溶解,经SP-SepharoseFF柱和Q-SepharoseFF柱两步纯化。rhBMP-2m包涵体经pH6．5尿素溶解后,经SP-Sepharose FF柱纯化,蛋白纯度为91％;若rhBMP-2m在碱性尿素中作用时间超过48h,再经Q-SepharoseFF柱纯化后,纯化产物中在还原性SDS-PAGE中会出现少量与rhBMP-2m二聚体大小接近的蛋白带,显示出碱性尿素对rhBMP-2m的共价修饰作用,会严重地影响rhBMP-2m的纯化效果和活性;若24h内完成分离纯化则影响较小,纯化后rhBMP-2m单体的纯度达98％以上。本研究表明尿素适合rhBMP-2m包涵体的大规模纯化。文章对使用尿素的利弊进行了讨论,提出大规模制备蛋白质时最好避免在碱性环境使用高浓度尿素。     

EB病毒核抗原1羧基端原核表达产物的纯化方法

EB病毒核抗原1羧基端的原核表达产物以包涵体和可溶性两种形式存在,用镍离子亲和柱分别对其进行了纯化.结果显示,可溶性部分以及经2M尿素溶解后的包涵体的最适咪唑洗脱浓度均为150mM.纯化后重组蛋白的纯度在90%以上.     

血小板反应素-1活性片段的克隆与表达

选择两段血小板反应素（TSP-1）中抑制血管再生的活性片段，设计两对引物，使用RT-PCR的方法从人血细胞中进行克隆并对获得片段进行测序验证．克隆片段大小分别为723和522bp，命名为聪P-1-1和聪P-1-2．利用原核表达载体pET-29a获得大肠杆菌重组子，重组子经过IPTG诱导以包涵体的形式表达相应的多肽片段．再对包涵体进行体外溶解、纯化，得到了目的多肽．     

小菜蛾β-1,3-葡聚糖识别蛋白βGRP基因的克隆与表达

为研究小菜蛾的先天免疫机制,从小菜蛾幼虫体内克隆得到一条β-1,3-葡聚糖识别蛋白(β-1,3-glucan recognition protein,βGRP)基因,利用生物信息学软件对该基因及其编码蛋白的理化性质、疏水性、结构等方面进行分析与预测,同时构建系统进化树.为研究该蛋白的功能,以大肠杆菌为宿主表达该基因,利用镍柱纯化目的蛋白.实验结果表明,该序列的开放阅读框长1 287 bp,编码428个氨基酸,编码的蛋白质理论分子质量约48.13 ku,理论的等电点为6.18,为亲水性蛋白;进化树分析表明,该蛋白跟家蚕、柞蚕、菜青虫、棉铃虫、冬尺蠖蛾、粉纹夜蝶归为同一大类;经大肠杆菌表达的蛋白均为不溶性的包涵体,通过对包涵体的变性及镍柱的纯化,得到了浓度较高的可溶性目的蛋白.     

重组人粒细胞集落刺激因子的纯化与复性

人粒细胞集落刺激因子 ( h G-CSF)有促进粒系造血干细胞增殖分化及增强成熟细胞功能的作用 ,广泛应用于医疗上癌症化疗、骨髓发育不良、再生障碍性贫血和先天性、特发性等嗜中性白细胞缺乏症的治疗。目前 ,h G-CSF主要来源工程菌发酵产生 ,浓缩于菌体包涵体之中 ,包涵体之中的 h G-CSF是没有生物活性的 ,必须经过溶解、分离、纯化和复性才有活性 ,有关 h G-CSF纯化和复性的研究实验如下 :一、材料与方法1 .包涵体来源 :上海三维公司赠送 ,由工程菌经发酵、收集菌体、破菌、离心和沉淀获得。2 .包涵体的洗涤 :主要是洗去包涵体表面的…     

B型产气荚膜梭菌β毒素的表达与纯化

将构建好的表达产气荚膜梭菌β毒素的重组质粒pET-32a-β转化大肠杆菌BL21(DE3),将得到的重组菌株BL21(DE3)(pET-32a-β)用IPTG进行诱导表达,探究其最佳诱导时间.对所表达的β毒素包涵体进行变性、纯化和复性,获得了纯度较高的可溶性蛋白,动物免疫实验取得了良好的结果,为下一步抗产气荚膜梭菌β毒素的单克隆抗体和单链抗体的研究奠定基础.     

大肠杆菌表达的成骨蛋白-1的复性研究

带有rhOP-1／pBV221-的E．coli表达得到的rhOP-1以不溶的包涵体形式存在，用高浓度的变性剂溶解后，经过DEAE-FF纯化，得到高纯度的目的蛋白。利用各种不同方法对蛋白质进行复性，并对复性结果进行比较，发现添加氧化还原剂最有助于二聚体的形成，这是由蛋白质分子的结构和理化性质决定的。     

Characterization of Ordovician carbonate reservoirs, southeastern Saskatchewan, Canada

The discovery of the prolific Ordovician Red River reservoirs in 1995 in southeastern Saskatchewan was the catalyst for extensive exploration activity which resulted in the discovery of more than 15 new Red River pools. The best yields of Red River production to date have been from dolomite reservoirs. Understanding the processes of dolomitization is, therefore, crucial for the prediction of the connectivity, spatial distribution and heterogeneity of dolomite reservoirs.The Red River reservoirs in the Midale area consist of 3～4 thin dolomitized zones, with a total thickness of about 20 m, which occur at the top of the Yeoman Formation. Two types of replacement dolomite were recognized in the Red River reservoir: dolomitized burrow infills and dolomitized host matrix. The spatial distribution of dolomite suggests that burrowing organisms played an important role in facilitating the fluid flow in the backfilled sediments. This resulted in penecontemporaneous dolomitization of burrow infills by normal seawater. The dolomite in the host matrix is interpreted as having occurred at shallow burial by evaporitic seawater during precipitation of Lake Almar anhydrite that immediately overlies the Yeoman Formation. However, the low δ18O values of dolomited burrow infills (-5.9‰～ -7.8‰, PDB) and matrix dolomites (-6.6‰～ -8.1‰, avg. -7.4‰ PDB) compared to the estimated values for the late Ordovician marine dolomite could be attributed to modification and alteration of dolomite at higher temperatures during deeper burial, which could also be responsible for its 87Sr/86Sr ratios (0.7084～0.7088) that are higher than suggested for the late Ordovician seawaters (0.7078～0.7080). The trace amounts of saddle dolomite cement in the Red River carbonates are probably related to "cannibalization" of earlier replacement dolomite during the chemical compaction.     

An Index mechanism for multi-scale view in spatial databases

There are numerous geometric objects stored in the spatial databases. An importance function in a spatial database is that users can browse the geometric objects as a map efficiently. Thus the spatial database should display the geometric objects users concern about swiftly onto the display window. This process includes two operations:retrieve data from database and then draw them onto screen. Accordingly, to improve the efficiency, we should try to reduce time of both retrieving object and displaying them. The former can be achieved with the aid of spatial index such as R-tree, the latter require to simplify the objects. Simplification means that objects are shown with sufficient but not with unnecessary detail which depend on the scale of browse. So the major problem is how to retrieve data at different detail level efficiently. This paper introduces the implementation of a multi-scale index in the spatial database SISP (Spatial Information Shared Platform) which is generalized from R-tree. The difference between the generalization and the R-tree lies on two facets: One is that every node and geometric object in the generalization is assigned with a importance value which denote the importance of them, and every vertex in the objects are assigned with a importance value,too. The importance value can be use to decide which data should be retrieve from disk in a query. The other difference is that geometric objects in the generalization are divided into one or more sub-blocks, and vertexes are total ordered by their importance value. With the help of the generalized R-tree, one can easily retrieve data at different detail levels.Some experiments are performed on real-life data to evaluate the performance of solutions that separately use normal spatial index and multi-scale spatial index. The results show that the solution using multi-scale index in SISP is satisfying.     

A computer generator for randomly layered structures

AcomputergeneratorforrandomlylayeredstructuresYUJia shun1,2,HEZhen hua2(1.TheInstituteofGeologicalandNuclearSciences,NewZealand;2.StateKeyLaboratoryofOilandGasReservoirGeologyandExploitation,ChengduUniversityofTechnology,China)Abstract:Analgorithmisintrod…     

海南岛地体及其毗邻陆缘晚中生代—新生代古地磁研究和构造演化

本文叙述了对海南岛及其毗邻大陆边缘白垩纪到第四纪地层岩石进行古地磁研究的全部工作过程。通过分析岩石中剩余磁矢量的磁偏角及磁倾角的变化,提出海南岛白垩纪以来经历的构造演化模式如下:早期伴随顺时针旋转而向南迁移,后期伴随逆时针转动并向北运移。联系该地区及邻区的地质、地球物理资料,对海南岛上述的构造地体运动提出以下认识:北部湾内早期有一拉张作用,主要是该作用使湾内地壳显著伸长减薄,形成北部湾盆地。从而导致了海南岛的早期构造运动,而海南岛后期的构造运动则主要是受南海海底扩张的影响。海南地体运动规律的阐明对于了解北部湾油气盆地的形成演化有重要的理论和实际意义。     

Exciton Seebeck in Molecular Systems

Various applications relevant to the exciton dynamics,such as the organic solar cell,the large-area organic light-emitting diodes and the thermoelectricity,are operating under temperature gradient.The potential abnormal behavior of the exicton dynamics driven by the temperature difference may affect the efficiency and performance of the corresponding devices.In the above situations,the exciton dynamics under temperature difference is mixed with     

Achieving Unusual States of Matter Under High Pressure

The elongation method,originally proposed by Imamura was further developed for many years in our group.As a method towards O(N)with high efficiency and high accuracy for any dimensional systems.This treatment designed for one-dimensional(ID)polymers is now available for three-dimensional(3D)systems,but geometry optimization is now possible only for 1D-systems.As an approach toward post-Hartree-Fock,it was also extended to     

《Chinese Science Bulletin》SUBJECT INDEX TO VOLUME 59(2014)

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An on-line scaling method for improving scalability of a database cluster

The explosive growth of the Internet and database applications has driven database to be more scalable and available, and able to support on-line scaling without interrupting service. To support more client's queries without downtime and degrading the response time, more nodes have to be scaled up while the database is running. This paper presents the overview of scalable and available database that satisfies the above characteristics. And we propose a novel on-line scaling method. Our method improves the existing on-line scaling method for fast response time and higher throughputs. Our proposed method reduces unnecessary network use, i.e. , we decrease the number of data copy by reusing the backup data. Also, our on-line scaling operation can be processed parallel by selecting adequate nodes as new node. Our performance study shows that our method results in significant reduction in data copy time.     

An improved R-tree based on childnode''s probability

R-Tree is a good structure for spatial searching. But in this indexing structure,either the sequence of nodes in the same level or sequence of traveling these nodes when queries are made is random. Since the possibility that the object appears in different MBR which have the same parents node is different, if we make the subnode who has the most possibility be traveled first, the time cost will be decreased in most of the cases. In some case, the possibility of a point belong to a rectangle will shows direct proportion with the size of the rectangle. But this conclusion is based on an assumption that the objects are symmetrically distributing in the area and this assumption is not always coming into existence. Now we found a more direct parameter to scale the possibility and made a little change on the structure of R-tree, to increase the possibility of founding the satisfying answer in the front sub trees. We names this structure probability based arranged R-tree (PBAR-tree).     

Integrating GIS Web services based on mediating architecture

The geographic information service is enabled by the advancements in general Web service technology and the focused efforts of the OGC in defining XML-based Web GIS service. Based on these models, this paper addresses the issue of services chaining,the process of combining or pipelining results from several interoperable GIS Web Services to create a customized solution. This paper presents a mediated chaining architecture in which a specific service takes responsibility for performing the process that describes a service chain. We designed the Spatial Information Process Language (SIPL) for dynamic modeling and describing the service chain, also a prototype of the Spatial Information Process Execution Engine (SIPEE) is implemented for executing processes written in SIPL. Discussion of measures to improve the functionality and performance of such system will be included.