乙型肝炎病毒转基因小鼠外源基因的复制和传代稳定性观察

目的研究乙型肝炎病毒(HBV)转基因小鼠外源基因的复制、传代稳定性.方法通过nest-PCR和Southern分子杂交等检测方法,对48#、87#、90#三个系列中各15只整合阳性小鼠定期进行血清中HBV DNA存在情况以及对各系列繁育F1-F5代小鼠外源基因整合传代进行检测.结果各系列转基因鼠血清都有HBV DNA存在,并以1月龄时血清中HBV DNA阳性率最高,但随月龄改变,其DNA阳性率也变化,并存在系列、个体及月龄上的差异.结论HBV基因可在转基因小鼠体内复制、传代,且目前已稳定传至第五代(F5).     

HBV C区基因扩增与PCR条件的优化

目的:为提高PCR检测乙型肝炎病毒(HBV)的特异性和灵敏度,降低成本,对PCR条件进行优化.方法:将HBV特异性基因片段转化到大肠杆菌DH5α中,提取质粒,利用PCR扩增HBV C区基因,对PCR条件中的退火温度、Mg2 浓度进行优化,并比较3种不同Taq DNA聚合酶的灵敏度.结果:HBV C区基因扩增的最佳退火温度为58℃,最佳Mg2 浓度为1.5mmol/L,Biostar Taq DNA聚合酶扩增到10-6.讨论:对HBV C区基因进行了转化和PCR实验条件的优化,为扩大PCR在乙型肝炎病毒(HBV)检测领域中的应用提供实验依据.     

酶学信号扩增方法定量检测生物素探针杂交

将靶核酸固定于微孔滴定板上，用化学方法标记的生物素探针进行杂交，采用底物－辅助因子循环信号扩增系统对杂交结果进行检测，结果表明用该信号检测系统的检验灵敏度比常用显色底物的检测灵敏度高１０倍。     

光生物素标记DNA荧光法微孔板DNA杂交测定类单胞菌DNA-DNA相关性的研究

应用光生物素标记DNA荧光法微孔板DNA杂交测定类单胞菌的分离菌株和参考菌株DNA-DNA相关性.热变性DNA固化在96孔微孔板,光生物素标记DNA与固化DNA杂交,测定酶链霉抗生物素偶联β-D-半乳糖苷酶(Strept-avidin-conjugated β-D-galctosidase)作用于敏感荧光底物4-甲基荧光素-β-D-半乳糖苷(4-methylumbelliferyl-β-D-galactoside).在波长365nm激发450nm发射,荧光分析仪测定杂交的荧光强度.根据荧光强度,计算分离菌株和参考菌株DNA-DNA相关性.试验结果表明:光生物素标记ONA荧光法微孔板DNA杂交是更敏感的方法,与光生物标记DNA硝酸纤维膜比色法点杂交、DNA动力学测定DNA同源性,数值分类法的结果基本相符.     

黄鳝性别决定与SRY基因不相关

以人和鼠的SRY片断为探针与黄鳝基因组DNA进行杂交,发现雌雄黄鳝中均有相同的杂交带.用一对SRY基因保守区HMGbox的引物,在雌雄黄鳝的基因组DNA中均扩增出约200bp片段.将此片断克隆测序后发现雌雄个体中此片断仅相差1个bp,且与人的SRY基因HMG盒基因极相似.以该片段与雌雄个体的RNA进行Northern杂交未能检测到杂交带,RT-PCR反应扩增出一条微弱的200bp片段.以上结果表明:在雌雄黄鳝的基因组DNA中均存在SRY同源片断;黄鳝中的SRY同源片断可能与其性别无直接关系,而是具备其他功能,由此推测低等脊椎动物的性别决定可能由其他基因控制.     

单胺氧化酶活性分析在HBV感染者中的应用

目的分析乙肝病毒(HBV)感染者血清单胺氧化酶活性,研究其临床应用价值.方法应用终点比色法检测血清单胺氧化酶(MAO)活性;ELISA法检测乙肝病毒标志物;PCR法检测HBv DNA;常规方法检测ALT.结果 ALT异常组,大三阳HBsAg(+),HBeAg(+),Anti-HBc(+)和小三阳HBsAg(+),Anti-HBe(+),Anti-HBc(+)合并HBV DNA阳性的HBV感染者MAO显著升高,而小三阳并HBV DNA阴性者MAO升高不明显;ALT正常组仅40例大三阳患者MAO升高明显,其他各组MAO大多在正常范围内.结论 HBV感染后,只要有病毒复制,就会破坏肝细胞,引起MAO升高.MAO活性分析对肝脏病情的判断有重要价值.     

大理屠宰猪HBV流行病学检测

目的：调查大理屠宰猪HBV感染及感染的基因型情况。方法：ELISA和型特异性PCR法分别检测猪HBV血清标志物和基因型。结果：检测猪HBV感染流行率为59.1%,HBsAg阳性率12.7%;对67份有效标本进行基因检测,共检得阳性结果36份,其中B基因型34例,B＋C基因型2例。结论：大理屠宰猪有很高的HBV感染存在,其感染基因型与本地人HBV感染基因型基本一致。     

克氏原螯虾主要变应原原肌球蛋白的一个片段区基因的克隆表达、纯化及免疫原性鉴定

克隆克氏原螯虾主要过敏原原肌球蛋白的一个片段区基因,表达并纯化该蛋白,检测其免疫原性.提取克氏原螯虾总RNA,设计特异性引物,RT-PCR克隆得到目的基因;将目的基因连入pMD19-T载体,提质粒酶切鉴定并测序;将测序正确的片段连入原核表达载体pET-32a(+)上,并转入BL21(DE3)宿主表达菌中;IPTG诱导表达;通过Ni2+亲和层析(FPLC)纯化目的蛋白;利用Western-blotting和ELISA检测该重组蛋白的免疫原性.克隆获得目的基因,其片段长为291 bp,编码97个氨基酸.重组蛋白纯化后经SDS-PAGE鉴定,目的蛋白大小与理论值相符.Western-blotting和ELISA结果表明该蛋白与克氏原螯虾过敏病人混合血清中IgE结合,具有免疫原性.     

乙型肝炎病毒x基因蛋白转导载体的构建

乙型肝炎病毒X蛋白在细胞转化和肝癌的发生发展中具有重要作用.为了深入研究X蛋白的致癌机理构建了pTAT-GFP-X载体.该研究以克隆在真核表达载体pCMV-X质粒中的x基因为模板,设计了x基因的PCR引物,采用PCR方法扩增x基因,回收PCR产物,以XhoI和EcoRI酶切位点将PCR产物连接到蛋白转导系统pTAT-GFP载体中,再用XhoI和EcoRI酶对筛选的重组子进行酶切鉴定,获得了510bp的目的片段,表明已成功地将目的片段克隆在pTAT-GFP载体中.经DNA序列分析检测,显示克隆的x基因无突变.经SDS-PAGE和Westernblot检测证实,将重组质料pTAT-GFP-X转化致大肠杆菌BL21中,可表达pTAT-GFP-X融合蛋白.该pTAT-GFP-X载体蛋白转导系统的构建,为进行X蛋白的蛋白转导实验奠定了基础.pTAT-GFP-X融合蛋白具有穿透细胞膜进入细胞的能力,进而在细胞内发挥作用,与转基因不同,无需细胞内基因表达的过程,使得X蛋白的定量实验成为可能,X蛋白的蛋白转导实验更有助于探讨x基因的致癌机理.     

反向线性探针杂交技术检测慢性乙型肝炎病毒拉米夫定耐药研究

目的:建立起简单、快速、灵敏、准确的慢性乙型肝炎病毒拉米夫定耐药位点的反向线性探针(reverse line probe,RLP)检测方法.方法:根据HBV野生及耐药基因序列设计通用探针、3'、5'对称加有poly-C的特异性探针和5'标记生物素的扩增引物.将探针线性固定在硝酸纤维膜上,使HBV PCR扩增产物与探针进行杂交.通过优化杂交条件,建立RLP检测方法.利用该方法对重庆地区86个慢性乙肝病人进行检测,同时与直接测序结果比较.结果:半巢式PCR可对103拷贝/ml的血清样本进行有效特异扩增,新建的RLP检测方法可对PCR扩增产物在1 ng/ml以上,或血清样本中突变型DNA占野生型DNA比例为5％以上的均可有效检测,86例临床的检测灵敏度为100％,野生型和耐药型的检测准确性分别为98.09％(103/105)、100％ (43/43),与直接测序法比,RLP检测野生与耐药混合型准确性更好.结论:反向线性探针杂交检测方法检测HBV拉米夫定耐药位点方便、灵敏、准确,是HBV拉米夫定治疗有效的监控工具,该方法适合临床应用.     

Characterization of Ordovician carbonate reservoirs, southeastern Saskatchewan, Canada

The discovery of the prolific Ordovician Red River reservoirs in 1995 in southeastern Saskatchewan was the catalyst for extensive exploration activity which resulted in the discovery of more than 15 new Red River pools. The best yields of Red River production to date have been from dolomite reservoirs. Understanding the processes of dolomitization is, therefore, crucial for the prediction of the connectivity, spatial distribution and heterogeneity of dolomite reservoirs.The Red River reservoirs in the Midale area consist of 3～4 thin dolomitized zones, with a total thickness of about 20 m, which occur at the top of the Yeoman Formation. Two types of replacement dolomite were recognized in the Red River reservoir: dolomitized burrow infills and dolomitized host matrix. The spatial distribution of dolomite suggests that burrowing organisms played an important role in facilitating the fluid flow in the backfilled sediments. This resulted in penecontemporaneous dolomitization of burrow infills by normal seawater. The dolomite in the host matrix is interpreted as having occurred at shallow burial by evaporitic seawater during precipitation of Lake Almar anhydrite that immediately overlies the Yeoman Formation. However, the low δ18O values of dolomited burrow infills (-5.9‰～ -7.8‰, PDB) and matrix dolomites (-6.6‰～ -8.1‰, avg. -7.4‰ PDB) compared to the estimated values for the late Ordovician marine dolomite could be attributed to modification and alteration of dolomite at higher temperatures during deeper burial, which could also be responsible for its 87Sr/86Sr ratios (0.7084～0.7088) that are higher than suggested for the late Ordovician seawaters (0.7078～0.7080). The trace amounts of saddle dolomite cement in the Red River carbonates are probably related to "cannibalization" of earlier replacement dolomite during the chemical compaction.     

A computer generator for randomly layered structures

AcomputergeneratorforrandomlylayeredstructuresYUJia shun1,2,HEZhen hua2(1.TheInstituteofGeologicalandNuclearSciences,NewZealand;2.StateKeyLaboratoryofOilandGasReservoirGeologyandExploitation,ChengduUniversityofTechnology,China)Abstract:Analgorithmisintrod…     

海南岛地体及其毗邻陆缘晚中生代—新生代古地磁研究和构造演化

本文叙述了对海南岛及其毗邻大陆边缘白垩纪到第四纪地层岩石进行古地磁研究的全部工作过程。通过分析岩石中剩余磁矢量的磁偏角及磁倾角的变化,提出海南岛白垩纪以来经历的构造演化模式如下:早期伴随顺时针旋转而向南迁移,后期伴随逆时针转动并向北运移。联系该地区及邻区的地质、地球物理资料,对海南岛上述的构造地体运动提出以下认识:北部湾内早期有一拉张作用,主要是该作用使湾内地壳显著伸长减薄,形成北部湾盆地。从而导致了海南岛的早期构造运动,而海南岛后期的构造运动则主要是受南海海底扩张的影响。海南地体运动规律的阐明对于了解北部湾油气盆地的形成演化有重要的理论和实际意义。     

Exciton Seebeck in Molecular Systems

Various applications relevant to the exciton dynamics,such as the organic solar cell,the large-area organic light-emitting diodes and the thermoelectricity,are operating under temperature gradient.The potential abnormal behavior of the exicton dynamics driven by the temperature difference may affect the efficiency and performance of the corresponding devices.In the above situations,the exciton dynamics under temperature difference is mixed with     

Achieving Unusual States of Matter Under High Pressure

The elongation method,originally proposed by Imamura was further developed for many years in our group.As a method towards O(N)with high efficiency and high accuracy for any dimensional systems.This treatment designed for one-dimensional(ID)polymers is now available for three-dimensional(3D)systems,but geometry optimization is now possible only for 1D-systems.As an approach toward post-Hartree-Fock,it was also extended to     

《Chinese Science Bulletin》SUBJECT INDEX TO VOLUME 59(2014)

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An on-line scaling method for improving scalability of a database cluster

The explosive growth of the Internet and database applications has driven database to be more scalable and available, and able to support on-line scaling without interrupting service. To support more client's queries without downtime and degrading the response time, more nodes have to be scaled up while the database is running. This paper presents the overview of scalable and available database that satisfies the above characteristics. And we propose a novel on-line scaling method. Our method improves the existing on-line scaling method for fast response time and higher throughputs. Our proposed method reduces unnecessary network use, i.e. , we decrease the number of data copy by reusing the backup data. Also, our on-line scaling operation can be processed parallel by selecting adequate nodes as new node. Our performance study shows that our method results in significant reduction in data copy time.     

An improved R-tree based on childnode''s probability

R-Tree is a good structure for spatial searching. But in this indexing structure,either the sequence of nodes in the same level or sequence of traveling these nodes when queries are made is random. Since the possibility that the object appears in different MBR which have the same parents node is different, if we make the subnode who has the most possibility be traveled first, the time cost will be decreased in most of the cases. In some case, the possibility of a point belong to a rectangle will shows direct proportion with the size of the rectangle. But this conclusion is based on an assumption that the objects are symmetrically distributing in the area and this assumption is not always coming into existence. Now we found a more direct parameter to scale the possibility and made a little change on the structure of R-tree, to increase the possibility of founding the satisfying answer in the front sub trees. We names this structure probability based arranged R-tree (PBAR-tree).     

Integrating GIS Web services based on mediating architecture

The geographic information service is enabled by the advancements in general Web service technology and the focused efforts of the OGC in defining XML-based Web GIS service. Based on these models, this paper addresses the issue of services chaining,the process of combining or pipelining results from several interoperable GIS Web Services to create a customized solution. This paper presents a mediated chaining architecture in which a specific service takes responsibility for performing the process that describes a service chain. We designed the Spatial Information Process Language (SIPL) for dynamic modeling and describing the service chain, also a prototype of the Spatial Information Process Execution Engine (SIPEE) is implemented for executing processes written in SIPL. Discussion of measures to improve the functionality and performance of such system will be included.     

Tracking data management using topology of moving object database system for moving object constrained trajectory in LBS application

Advances in wireless technologies and positioning technologies and spread of wireless devices, an interest in LBS (Location Based Service) is arising. To provide location based service, tracking data should have been stored in moving object database management system (called MODBMS) with proper policies and managed efficiently. So the methods which acquire the location information at regular time intervals then, store and manage have been studied. In this paper, we suggest tracking data management techniques using topology that is corresponding to the moving path of moving object. In our techniques, we update the MODBMS when moving object arrived at a street intersection or a curved road which is represented as the node in topology and predict the location at past and future with attribute of topology and linear function. In this technique, location data that are corresponding to the node in topology are stored, thus reduce the number of update and amount of data. Also in case predicting the location,because topology are used as well as existing location information, accuracy for prediction is increased than applying linear function or spline function.