Evidence for wavelike energy transfer through quantum coherence in photosynthetic systems

Photosynthetic complexes are exquisitely tuned to capture solar light efficiently, and then transmit the excitation energy to reaction centres, where long term energy storage is initiated. The energy transfer mechanism is often described by semiclassical models that invoke 'hopping' of excited-state populations along discrete energy levels. Two-dimensional Fourier transform electronic spectroscopy has mapped these energy levels and their coupling in the Fenna-Matthews-Olson (FMO) bacteriochlorophyll complex, which is found in green sulphur bacteria and acts as an energy 'wire' connecting a large peripheral light-harvesting antenna, the chlorosome, to the reaction centre. The spectroscopic data clearly document the dependence of the dominant energy transport pathways on the spatial properties of the excited-state wavefunctions of the whole bacteriochlorophyll complex. But the intricate dynamics of quantum coherence, which has no classical analogue, was largely neglected in the analyses-even though electronic energy transfer involving oscillatory populations of donors and acceptors was first discussed more than 70 years ago, and electronic quantum beats arising from quantum coherence in photosynthetic complexes have been predicted and indirectly observed. Here we extend previous two-dimensional electronic spectroscopy investigations of the FMO bacteriochlorophyll complex, and obtain direct evidence for remarkably long-lived electronic quantum coherence playing an important part in energy transfer processes within this system. The quantum coherence manifests itself in characteristic, directly observable quantum beating signals among the excitons within the Chlorobium tepidum FMO complex at 77 K. This wavelike characteristic of the energy transfer within the photosynthetic complex can explain its extreme efficiency, in that it allows the complexes to sample vast areas of phase space to find the most efficient path.     

Sex pheromones of the armyworm moth,Spodoptera exempta (Wlk.

Zusammenfassung Es wurden mit gas-chromatographischer Elektroantennogramm-Methode (Z)-9-tetradecenyl-1-acetat und (Z)-9, (E)-12-tetradecadienyl-1-acetat als die Sexuallockstoffe weiblicherSpodoptera exempta (Wlk.) identifiziert.

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Acknowledgment: We are grateful to Mr.C. Rivers, Unit of Insect Virology, University of Oxford Field Station, for supplying insect pupae.     

The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria

Bacillus anthracis is an endospore-forming bacterium that causes inhalational anthrax. Key virulence genes are found on plasmids (extra-chromosomal, circular, double-stranded DNA molecules) pXO1 (ref. 2) and pXO2 (ref. 3). To identify additional genes that might contribute to virulence, we analysed the complete sequence of the chromosome of B. anthracis Ames (about 5.23 megabases). We found several chromosomally encoded proteins that may contribute to pathogenicity--including haemolysins, phospholipases and iron acquisition functions--and identified numerous surface proteins that might be important targets for vaccines and drugs. Almost all these putative chromosomal virulence and surface proteins have homologues in Bacillus cereus, highlighting the similarity of B. anthracis to near-neighbours that are not associated with anthrax. By performing a comparative genome hybridization of 19 B. cereus and Bacillus thuringiensis strains against a B. anthracis DNA microarray, we confirmed the general similarity of chromosomal genes among this group of close relatives. However, we found that the gene sequences of pXO1 and pXO2 were more variable between strains, suggesting plasmid mobility in the group. The complete sequence of B. anthracis is a step towards a better understanding of anthrax pathogenesis.     

The genome sequence of the filamentous fungus Neurospora crassa

Neurospora crassa is a central organism in the history of twentieth-century genetics, biochemistry and molecular biology. Here, we report a high-quality draft sequence of the N. crassa genome. The approximately 40-megabase genome encodes about 10,000 protein-coding genes--more than twice as many as in the fission yeast Schizosaccharomyces pombe and only about 25% fewer than in the fruitfly Drosophila melanogaster. Analysis of the gene set yields insights into unexpected aspects of Neurospora biology including the identification of genes potentially associated with red light photobiology, genes implicated in secondary metabolism, and important differences in Ca2+ signalling as compared with plants and animals. Neurospora possesses the widest array of genome defence mechanisms known for any eukaryotic organism, including a process unique to fungi called repeat-induced point mutation (RIP). Genome analysis suggests that RIP has had a profound impact on genome evolution, greatly slowing the creation of new genes through genomic duplication and resulting in a genome with an unusually low proportion of closely related genes.     

Genome-wide recombination in Chlamydia trachomatis

A new study reports comparative genomic analysis of 52 geographically diverse strains of Chlamydia trachomatis. The authors reconstruct a genome-wide phylogeny of the species and report extensive genome-wide recombination across multiple lineages of this intracellular bacterial pathogen.     

The genome sequence of the rice blast fungus Magnaporthe grisea

Magnaporthe grisea is the most destructive pathogen of rice worldwide and the principal model organism for elucidating the molecular basis of fungal disease of plants. Here, we report the draft sequence of the M. grisea genome. Analysis of the gene set provides an insight into the adaptations required by a fungus to cause disease. The genome encodes a large and diverse set of secreted proteins, including those defined by unusual carbohydrate-binding domains. This fungus also possesses an expanded family of G-protein-coupled receptors, several new virulence-associated genes and large suites of enzymes involved in secondary metabolism. Consistent with a role in fungal pathogenesis, the expression of several of these genes is upregulated during the early stages of infection-related development. The M. grisea genome has been subject to invasion and proliferation of active transposable elements, reflecting the clonal nature of this fungus imposed by widespread rice cultivation.     

Computational roles for dopamine in behavioural control

Neuromodulators such as dopamine have a central role in cognitive disorders. In the past decade, biological findings on dopamine function have been infused with concepts taken from computational theories of reinforcement learning. These more abstract approaches have now been applied to describe the biological algorithms at play in our brains when we form value judgements and make choices. The application of such quantitative models has opened up new fields, ripe for attack by young synthesizers and theoreticians.     

BA和激素对‘Bonny Best’试管番茄愈伤组织形态发生的影响

用’Bonny Best’番茄品种的子叶和下胚轴作为外植体,在MS附加不同水平和比率的BA和2,4—D(或NAA)或IAA的培养基中,愈伤组织形态发生的情况是不同的。MS+BA4.44μM+2,4-D10μM(子叶),MS+BA0.44-4.44μM+2,4-D1—5μM(下胚轴)使外值体产生淡黄色疏松的愈伤组织,而且生长迅速。若2,4-D浓度低于5μM(子叶)或高于5μM(下胚轴)时,外植体形成白色紧密的愈伤组织,而且生长缓慢,固定2,4-D的浓度,BA浓度由高到低,所形成的愈伤组织的结构由紧密向疏松变化。愈伤组织的液体培养中也出现了类似现象。把愈伤组织转移到生茎培养基中,白色紧密的愈伤组织形成茎较为容易,培养21天后,茎的分化即开始。而疏松的愈伤组织的形态发生则经过了黄色疏松、深褐色胶状到白色紧密的变化。茎的分化出现较晚。愈伤组织培养时生长调节剂的水平对茎的分化有着直接的影响。较高水平的BA(22.2—44.4μM)+NAA10-40μM有利于茎的分化。把子叶和下胚轴切段培养在MS+BA22.2-44.4μM+IAA1-5μM的生茎培养基上,24—60天后,70％以上的外植体正常分化并伸长成茎,生枝率每个切段为3—4个。转移到MS培养基上,形成正常的带根幼苗。把下胚轴切段直接培养在没有激素的MS培养基上,三周后,45.8％的下胚轴形成正常幼苗,出枝率为1.0。把这些幼苗移栽到温室