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Phylogenetic position of Schnabelia, a genus endemic to China: Evidence from sequences of cpDNA matK gene and nrDNA ITS regions
引用本文:SHISuhua DUYaqing D.E.Boufford GONGXun HUANGYelin HEHanghang ZHONGYang. Phylogenetic position of Schnabelia, a genus endemic to China: Evidence from sequences of cpDNA matK gene and nrDNA ITS regions[J]. 科学通报(英文版), 2003, 48(15): 1576-1580. DOI: 10.1007/BF03183964
作者姓名:SHISuhua DUYaqing D.E.Boufford GONGXun HUANGYelin HEHanghang ZHONGYang
作者单位:[1]StatekeyLaboratoryforBiocontrol,SchoolofLifeSciences,ZhongshanUniversity,Guangzhou510275,China [2]HarvardUniversityHerbaria,22DivinityAvenue,Cambridge,MA02138-2020,USA
基金项目:哈佛大学校科研和教改项目,国家自然科学基金,国家自然科学基金,教育部专项基金 
摘    要:The chloroplast gene matK and the internal transcribed spacers (ITS) of the nuclear ribosomal DNA from Schnabelia, a genus endemic to China, and 6 genera of Verbenaceae and 13 genera of Lamiaceae were sequenced. The phylogenetic signal and validity outgroups were measured and evaluated by means of the relatively apparent synapomorphy analysis (RASA). Independent and combined phylogenetic analyses for the matK and ITS sequences were performed using the maximum parsimony (MP), neighbor-joining (NJ) and maximum likelihood (ML) methods, indicating that Schnabelia oligophylla and Caryopteris terniflora form a sister-group relationship. The Caryopteris complex is not shown to be a monophyly because Trichostema, C. paniculata and C. forrestii are paraphyletic to the clade containing the remaining members of the complex. A monophyly of Ajugoideae proposed by Cantino et al., including 8 genera in this study, is strongly supported and the closest relatives of Schnabelia are in the Ajugoideae (Lamiaceae), especially near Caryopteris terniflora. The polygenetic analyses also showed that the genera of Lamiaceae and Verbenaceae sampled in this tudy are phylogenetically mixed and the genus Avicennia is distant to other genera of Verbenaceae. RASA and combined analysis can be used as effective approaches to determining the relationships among phylogenetically complex groups.

关 键 词:中国 共源性状分析 脱氧核糖核酸 植物学
收稿时间:2003-05-06

Phylogenetic position ofSchnabelia, a genus endemic to China: Evidence from sequences of cpDNAmatK gene and nrDNA ITS regions
Suhua?ShiEmail author,Yaqing?Du,D.?E.?Boufford,Xun?Gong,Yelin?Huang,Hanghang?He,Yang?ZhongEmail author. Phylogenetic position ofSchnabelia, a genus endemic to China: Evidence from sequences of cpDNAmatK gene and nrDNA ITS regions[J]. Chinese science bulletin, 2003, 48(15): 1576-1580. DOI: 10.1007/BF03183964
Authors:Suhua?Shi  author-information"  >  author-information__contact u-icon-before"  >  mailto:lssssh@zsu.edu.cn"   title="  lssssh@zsu.edu.cn"   itemprop="  email"   data-track="  click"   data-track-action="  Email author"   data-track-label="  "  >Email author,Yaqing?Du,D.?E.?Boufford,Xun?Gong,Yelin?Huang,Hanghang?He,Yang?Zhong  author-information"  >  author-information__contact u-icon-before"  >  mailto:yangzhong@fudan.edu.cn"   title="  yangzhong@fudan.edu.cn"   itemprop="  email"   data-track="  click"   data-track-action="  Email author"   data-track-label="  "  >Email author
Affiliation:SHI Suhua1, DU Yaqing1, D. E. Boufford2, GONG Xun1, HUANG Yelin1, HE Hanghang1 & ZHONG Yang2 1. State key Laboratory for Biocontrol, School of Life Sciences, Zhongshan University, Guangzhou 510275, China; 2. Harvard University Herbaria, 22 Divinity Avenue, Cambridge, MA 02138-2020, USA; 3. Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, Shanghai 200433, China
Abstract:The chloroplast gene matK and the internal transcribed spacers (ITS) of the nuclear ribosomal DNA from Schnabelia, a genus endemic to China, and 6 genera of Verbenaceae and 13 genera of Lamiaceae were sequenced. The phylogenetic signal and validity outgroups were measured and evaluated by means of the relatively apparent synapomorphy analysis (RASA). Independent and combined phylogenetic analyses for the matK and ITS sequences were performed using the maximum parsimony (MP), neighbor- joining (NJ) and maximum likelihood (ML) methods, indicating that Schnabelia oligophylla and Caryopteris terniflora form a sister-group relationship. The Caryopteris complex is not shown to be a monophyly because Trichostema, C. paniculata and C. forrestii are paraphyletic to the clade containing the remaining members of the complex. A monophyly of Ajugoideae proposed by Cantino et al., including 8 genera in this study, is strongly supported and the closest relatives of Schnabelia are in the Ajugoideae (Lamiaceae), especially near Caryopteris terniflora. The polygenetic analyses also showed that the genera of Lamiaceae and Verbenaceae sampled in this tudy are phylogenetically mixed and the genus Avicennia is distant to other genera of Verbenaceae. RASA and combined analysis can be used as effective approaches to determining the relationships among phylogenetically complex groups.
Keywords:Schnabelia   Verbenaceae   Lamiaceae   phylogenetic analysis   relative apparent synapomorphy analysis   cpDNA matK gene   nrDNA ITS regions.
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