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边排序贝叶斯网络结构学习算法应用于基因调控网络构建
引用本文:刘昱昊,刘桂霞,苏兰莹,郑山红,王晗,周春光.边排序贝叶斯网络结构学习算法应用于基因调控网络构建[J].吉林大学学报(理学版),2010,48(4):624-630.
作者姓名:刘昱昊  刘桂霞  苏兰莹  郑山红  王晗  周春光
作者单位:1. 吉林大学 计算机科学与技术学院, 长春 130012; 2. 长春工业大学 计算机科学与工程学院, 长春 130012
基金项目:国家自然科学基金,国家高技术研究发展计划863项目基金 
摘    要:提出一种基于多数据源融合思想的贝叶斯网络结构学习算法.该方法在现有贝叶斯网络结构学习算法的基础上,进行网络结构再学习,能有效处理不同数据源无法简单合并的问题.实验结果表明:在现有基因芯片数据节点数过多但数据量过少的前提下,该算法能有效提高建网精度;基于酿酒酵母细胞周期对不同实验条件下的表达数据进行融合,可以将正确率提高约12%.

关 键 词:基因调控网络    贝叶斯网络    边排序贝叶斯网络结构学习算法    多数据源融合  
收稿时间:2009-07-10

Using Line Sorting Bayesian Structure Learning Algorithm to Get Gene Regulatory Network
LIU Yu-hao,LIU Gui-xia,SU Lan-ying,ZHENG Shan-hong,WANG Han,ZHOU Chun-guang.Using Line Sorting Bayesian Structure Learning Algorithm to Get Gene Regulatory Network[J].Journal of Jilin University: Sci Ed,2010,48(4):624-630.
Authors:LIU Yu-hao  LIU Gui-xia  SU Lan-ying  ZHENG Shan-hong  WANG Han  ZHOU Chun-guang
Institution:1. College of Computer Science and Technology, Jilin University, Changchun 130012, China;2. School of Computer Science and Engineering, Changchun University of Technology, Changchun 130012, China
Abstract:This paper presents a new Bayesian network structure learning algorithm based on the idea of a fusion of multiple datasets. This algorithm can reconstruct the network with the help of existing Bayesian network structure learning algorithm, which can deal with the problem effectively that different datasets can’t be merged simply. With the microarray datasets of the Cerevisiae yeast cycle under different conditions, the algorithm can increase the correct rate by about 12%. Experimental results show that this algorithm canimprove the accuracy effectively even if there is few microarray data but too many genes.
Keywords:gene regulatory network  Bayesian network  line sorting Bayesian structure learning algorithm  multiple data fusion  
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