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Evaluating the reliability of microsatellite genotyping from low-quality DNA templates with a polynomial distribution model
Authors:Gang He  Kang Huang  SongTao Guo  WeiHong Ji  XiaoGuang Qi  Yi Ren  XueLin Jin  BaoGuo Li
Institution:(1) Key Laboratory of Resource Biology and Biotechnology in Western China of Ministry of Education, College of Life Sciences, Northwest University, Xi’an, 710069, China;(2) Ecology &; Conservation Group, Institute for Natural Sciences, Massey University, Auckland, 904, New Zealand;(3) Institute of Zoology, Shaanxi Academy of Sciences, Xi’an, 710032, China;(4) Shaanxi Wild Animal Rescue and Research Center, Xi’an, 710402, China;
Abstract:Molecular studies using trace DNA, such as from museum specimens, ancient or forensic samples and samples obtained noninva- sively, often have a common problem of low quality of DNA templates. Amplification errors, such as allelic dropout and false allele, may arise during polymerase chain reaction (PCR) using such samples. A mathematical model which treats homozygotes and heterozygotes discriminately has been developed to measure sample quality and compute the confidence level of using multiple- tube appro...
Keywords:Sichuan snub-nosed monkey  noninvasive sampling  microsatellite  genotyping errors  polynomial distribution model  
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