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Molecular phylogenetic status of Siberian roe deer (Capreolus pygargus) based on mitochondrial cytochrome b from Jeju Island in Korea
作者姓名:Yong-Su Park  ;Baek-Jun Kim  ;Woo-Shin Lee  ;Jong-Taek Kim  ;Tae-Wook Kim  ;Hong-Shik Oh
作者单位:[1]Jangsu Endangered Species Restoration Team, Jangsu County,Jeonbuk 176-7, Republic of Korea; [2]Department of Climate and Ecology, National Institute ofEcology, Seocheon 325-813, Republic of Korea; [3]Department of Forest Science, Seoul National University,Seoul 151-192, Republic of Korea; [4]School of Veterinary Medicine, Kangwon National University,Chuncheon, Gangwon 200-701, Republic of Korea; [5]Department of Science Education, Jeju National University,Jeju 690-750, Republic of Korea
基金项目:We thank all our collaborators, especially J Y Song and A F Yahya for helping our experiment and analysis in this study. M C An, M H Chang and S G Park helped our sampling of Mainland and Jeju Island roe deer.
摘    要:In order to elucidate the genetic diversity and taxonomic status of Siberian roe deer (Capreolus pygar- gus) from the Korean peninsula, partial sequences of the mitochondrial cytochrome b gene were analyzed. We col- lected 57 roe deer samples from Mainland and Jeju Island between July 2004 and June 2009. A total of 50 sequences (1,070 bp) were obtained, and seven haplotypes were defined. Five haplotypes were found from Mainland, and two were discovered from Jeju Island. The genetic diver- sity was lower in the Jeju Island population than in the Mainland population. In addition, both the consensus neighbor-joining tree and maximum parsimony tree showed an identical topology between the Mainland and Jeju Island clades. Based on the results, two subspecies of the Korean roe deer were confirmed. Siberian roe deer in Jeju Island showed a distinct difference in the cytochrome b gene compared with other Siberian roe deer, being aunique native species inhabiting only Jeju Island in Korea. Because Siberian roe deer in Jeju Island can be classified at subspecies level, the new subspecies in Jeju was named Capreolus pygargus jejuensis in this study. For this new subspecies, reasonable conservation and management effort is needed in the future.

关 键 词:线粒体细胞色素b基因  济州岛  系统发育地位  矮鹿  韩国    遗传多样性  分子

Molecular phylogenetic status of Siberian roe deer (Capreolus pygargus) based on mitochondrial cytochrome b from Jeju Island in Korea
Yong-Su Park,;Baek-Jun Kim,;Woo-Shin Lee,;Jong-Taek Kim,;Tae-Wook Kim,;Hong-Shik Oh.Molecular phylogenetic status of Siberian roe deer (Capreolus pygargus) based on mitochondrial cytochrome b from Jeju Island in Korea[J].Chinese Science Bulletin,2014,59(32):4283-4288.
Authors:Yong-Su Park  Baek-Jun Kim  Woo-Shin Lee  Jong-Taek Kim  Tae-Wook Kim  Hong-Shik Oh
Institution:1. Jangsu Endangered Species Restoration Team, Jangsu County, Jeonbuk, 176-7, Republic of Korea
2. Department of Climate and Ecology, National Institute of Ecology, Seocheon, 325-813, Republic of Korea
3. Department of Forest Science, Seoul National University, Seoul, 151-192, Republic of Korea
4. School of Veterinary Medicine, Kangwon National University, Chuncheon, Gangwon, 200-701, Republic of Korea
5. Department of Science Education, Jeju National University, Jeju, 690-750, Republic of Korea
Abstract:In order to elucidate the genetic diversity and taxonomic status of Siberian roe deer (Capreolus pygargus) from the Korean peninsula, partial sequences of the mitochondrial cytochrome b gene were analyzed. We collected 57 roe deer samples from Mainland and Jeju Island between July 2004 and June 2009. A total of 50 sequences (1,070 bp) were obtained, and seven haplotypes were defined. Five haplotypes were found from Mainland, and two were discovered from Jeju Island. The genetic diversity was lower in the Jeju Island population than in the Mainland population. In addition, both the consensus neighbor-joining tree and maximum parsimony tree showed an identical topology between the Mainland and Jeju Island clades. Based on the results, two subspecies of the Korean roe deer were confirmed. Siberian roe deer in Jeju Island showed a distinct difference in the cytochrome b gene compared with other Siberian roe deer, being a unique native species inhabiting only Jeju Island in Korea. Because Siberian roe deer in Jeju Island can be classified at subspecies level, the new subspecies in Jeju was named Capreolus pygargus jejuensis in this study. For this new subspecies, reasonable conservation and management effort is needed in the future.
Keywords:Genetic diversity  Jeju Island  Mitochondrial cytochrome b gene  Phylogeny  Siberian roe deer
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