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皱纹盘鲍Hdh-MMP-1基因cDNA的克隆及原核表达
引用本文:段雪昆1,杜翠红1,2,胡健健1,蔡秋凤1,2,刘光明1,2,曹敏杰1,2. 皱纹盘鲍Hdh-MMP-1基因cDNA的克隆及原核表达[J]. 集美大学学报(自然科学版), 2016, 0(5): 321-329
作者姓名:段雪昆1  杜翠红1  2  胡健健1  蔡秋凤1  2  刘光明1  2  曹敏杰1  2
作者单位:(1.集美大学食品与生物工程学院,福建 厦门 361021;2.水产品深加工技术国家地方聚合工程研究中心,福建 厦门 361021)
摘    要:利用同源克隆方法和cDNA末端快速扩增(RACE)技术,从皱纹盘鲍(Haliotis discus hannai)肌肉组织中克隆得到基质金属蛋白酶-1基因(Hdh-MMP-1)cDNA全长序列(GenBank登录号:KR537291)。结果表明,Hdh-MMP-1 cDNA全长2136 bp,其中ORF长度为1551 bp,编码区含有516个氨基酸残基,预测其分子质量为58.94 ku,理论等电点为5.99。Hdh-MMP-1具有MMPs家族典型的N-端前肽区、催化区、铰链区和C-端类血红素结合区。利用SOPMA和SWISS-MODEL软件对该基因编码蛋白质高级结构进行了预测分析。氨基酸序列相似性结果显示,Hdh-MMP-1不仅与多种生物MMP-1基因具有序列相似性,且与某些软体动物和虫类的MMP-14及MMP-19也具有序列相似性。多序列比对结果显示,Hdh-MMP-1与红螺鲍、杂色鲍、美洲牡蛎的MMP-1相似性分别为95.29%、82.35%、38.85%。随后,构建了表达载体pET28a-catMMP-1,利用大肠杆菌原核表达系统,在大肠杆菌BL21 (DE3)中成功对该蛋白质催化区进行异源表达。

关 键 词:皱纹盘鲍  基质金属蛋白酶  cDNA克隆  生物信息学  原核表达

cDNA Cloning and Prokaryotic Expression of Matrix Metalloproteinase-1 from Haliotis discus hannai
DUAN Xue-kun1,DU Cui-hong1,2,HU Jian-jian1,CAI Qiu-feng1,2,LIU Guang-ming1,2,CAO Min-jie1,2. cDNA Cloning and Prokaryotic Expression of Matrix Metalloproteinase-1 from Haliotis discus hannai[J]. the Editorial Board of Jimei University(Natural Science), 2016, 0(5): 321-329
Authors:DUAN Xue-kun1  DU Cui-hong1  2  HU Jian-jian1  CAI Qiu-feng1  2  LIU Guang-ming1  2  CAO Min-jie1  2
Affiliation:(1.College of Food and Biological Engineering,Jimei University,Xiamen 361021,China;2.National and Local Joint Engineering Research Center of Deep Processing Technology for Aquatic Products,Xiamen 361021,China)
Abstract:Matrix metalloproteinase-1 gene (Hdh-MMP-1)from the muscle of abalone(Haliotis discus hannai) was cloned by RT-PCR and RACE technology(GenBank accession number KR537291).The full-length of cDNA Hdh-MMP-1 was 2136 bp,including an open reading frame (ORF) of 1551 bp coding 516 amino acid residues with an estimated molecular weight of 58.94 ku and a theoretical pI of 5.99.The Hdh-MMP-1 contains N-terminal prodomain,catalytic domain,hinge region and C-terminal hemopexin domain,which was typical in matrix metalloproteinases.Higher-order structure of Hdh-MMP-1 was predicted using SOPMA and SWISS-MODEL.The results of multiple sequence alignment analysis showed that there was about 38.9%~95.3% identities in amino acid sequence with some other organisms.Prokaryotic expression plasmid pET28a-catMMP-1 containing the catalytic domain of MMP-1 was constructed.The recombinant MMP-1 was successfully expressed in Escherichia coli BL21cells.
Keywords:Haliotis discus hannai  matrix metalloproteinases  cDNA cloning  bioinformatics  prokaryotic expression
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