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大肠杆菌编码区5′端碱基的统计分析
引用本文:李宏,罗辽复. 大肠杆菌编码区5′端碱基的统计分析[J]. 内蒙古大学学报(自然科学版), 1998, 0(6)
作者姓名:李宏  罗辽复
作者单位:内蒙古大学理论物理和理论生物学研究室
摘    要:统计了大肠杆菌1288个编码序列开始的33个碱基位点(11个密码子)上各碱基出现的概率,发现第2、第3密码子各位点上的碱基概率分布与其它密码子上的碱基分布概率不一样;碱基G和T出现的概率从第4个密码子后呈现明显的3周期分布.我们还研究了这些位点上的碱基概率分布与基因表达水平的关系,发现高表达基因和低表达基因在第2、第3密码子各位点上,其各种碱基的概率分布是有区别的;高表达基因碱基G和T的概率分布3周期性更明显.

关 键 词:大肠杆菌,编码序列,碱基概率分布,基因表达水平

The Statistical Analysis on the Bases in Coding Start Region of E.coli Genes
LI Hong,LUO Liaofu. The Statistical Analysis on the Bases in Coding Start Region of E.coli Genes[J]. Acta Scientiarum Naturalium Universitatis Neimongol, 1998, 0(6)
Authors:LI Hong  LUO Liaofu
Abstract:The 1 288 beginning sequences in gene coding region of Escherichia coli are compiled and the probability of bases in site 1 to site 33 are calculated.We find that the probability distribution of bases in each base site of second and third condon are different from the others;At the beginning of the fourth codon,the probabilities of bases G and base T in each site of codons have distinctly 3 period distribution.The relation between the probability distribution of bases in these sites and gene expression level are studied.The results show that the probability distribution of bases in codon 2 and codon 3 have differences between high and low expressed genes;Its 3 period distribution of base G and T for high expressed genes are more distinct than low expressed genes.
Keywords:Escherichia coli   coding sequence  base probability distriubtion  gene expression level
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