Eustigmaeus floridensis sp. nov., a new mite species of the genus Eustigmaeus Berlese, 1910 (Acari: Stigmaeidae) from citrus in Florida

Eustigmaeus floridensis sp. nov. is described and illustrated based on female specimens collected from citrus trees in Florida, USA. The new species is closely related to Eustigmaeus arcuata, Eustigmaeus segnis and Eustigmaeus microsegnis, all known to occur in Florida. Eustigmaeus floridensis sp. nov. can be distinguished by larger dimples associated with setae sce, d₂ and e₁ containing at least four or more vacuoles centrally; dorsal body setae broadly lanceolate and feather-like, except c₂, which is slender; anogenital area with striae and one pair of serrated aggenital (ag1) and three pairs of serrated pseudanal (ps_1?3) setae. A key to the Eustigmaeus species known to occur across USA is also provided.     

Complex reorganization and predominant non-homologous repair following chromosomal breakage in karyotypically balanced germline rearrangements and transgenic integration

We defined the genetic landscape of balanced chromosomal rearrangements at nucleotide resolution by sequencing 141 breakpoints from cytogenetically interpreted translocations and inversions. We confirm that the recently described phenomenon of 'chromothripsis' (massive chromosomal shattering and reorganization) is not unique to cancer cells but also occurs in the germline, where it can resolve to a relatively balanced state with frequent inversions. We detected a high incidence of complex rearrangements (19.2%) and substantially less reliance on microhomology (31%) than previously observed in benign copy-number variants (CNVs). We compared these results to experimentally generated DNA breakage-repair by sequencing seven transgenic animals, revealing extensive rearrangement of the transgene and host genome with similar complexity to human germline alterations. Inversion was the most common rearrangement, suggesting that a combined mechanism involving template switching and non-homologous repair mediates the formation of balanced complex rearrangements that are viable, stably replicated and transmitted unaltered to subsequent generations.     

Barn owl diet includes mammal species new to the island fauna of the Great Salt Lake

An investigation of the diet of the Common Barn-owl ( Tyto alba ) on Antelope Island, Great Salt Lake, Utah, yielded four mammal species not previously known to occur on any island in the Great Salt Lake ( Microtus pennsylvanicus, M. montanus, Ondatra zibethicus , and a Sorex sp.). Two other species, known from other islands, were added to the list of fauna of Antelope Island ( Perognathus parvus and Reithrodontomys megalotis ). The barn owl diet on Antelope Island was remarkably like that of barn owls feeding in farmlands adjacent to the Great Salt Lake despite major vegetational differences.     

Towards sustainability in world fisheries

Fisheries have rarely been 'sustainable'. Rather, fishing has induced serial depletions, long masked by improved technology, geographic expansion and exploitation of previously spurned species lower in the food web. With global catches declining since the late 1980s, continuation of present trends will lead to supply shortfall, for which aquaculture cannot be expected to compensate, and may well exacerbate. Reducing fishing capacity to appropriate levels will require strong reductions of subsidies. Zoning the oceans into unfished marine reserves and areas with limited levels of fishing effort would allow sustainable fisheries, based on resources embedded in functional, diverse ecosystems.     

Amplification of PPM1D in human tumors abrogates p53 tumor-suppressor activity

Expression of oncogenic Ras in primary human cells activates p53, thereby protecting cells from transformation. We show that in Ras-expressing IMR-90 cells, p53 is phosphorylated at Ser33 and Ser46 by the p38 mitogen-activated protein kinase (MAPK). Activity of p38 MAPK is regulated by the p53-inducible phosphatase PPM1D, creating a potential feedback loop. Expression of oncogenic Ras suppresses PPM1D mRNA induction, leaving p53 phosphorylated at Ser33 and Ser46 and in an active state. Retrovirus-mediated overexpression of PPM1D reduced p53 phosphorylation at these sites, abrogated Ras-induced apoptosis and partially rescued cells from cell-cycle arrest. Inactivation of p38 MAPK (the product of Mapk14) in vivo by gene targeting or by PPM1D overexpression expedited tumor formation after injection of mouse embryo fibroblasts (MEFs) expressing E1A+Ras into nude mice. The gene encoding PPM1D (PPM1D, at 17q22/q23) is amplified in human breast-tumor cell lines and in approximately 11% of primary breast tumors, most of which harbor wildtype p53. These findings suggest that inactivation of the p38 MAPK through PPM1D overexpression resulting from PPM1D amplification contributes to the development of human cancers by suppressing p53 activation.     

Influence of fine sediment on macroinvertebrate colonization of surface and hyporheic stream substrates

Colonization of macroinvertebrates was assessed in a stream impacted by inputs of fine sediments. Colonization was examined at the stream surface and within the hyporheos with Whitlock-Vibert (W-V) boxes. Hyporheic areas accumulated much greater amounts of all size categories of sediment. No significant difference was observed in the amounts of organic matter accumulated at either depth. Only 150-μm sediment had significant effects on macroinvertebrate total numbers and number of taxa. Total numbers of invertebrates at 30 cm were only 20% of those at the surface. Canonical Correspondence of Analysis indicated that the strongest influence on macroinvertebrates colonizing W-V boxes at the surface was stream size and secondarily fine sediments. Within the hyporheos, abundance of fine sediment was the dominant influence on macroinvertebrate assemblages. Impacts of sedimentation on hyporheic environments can have significant and persistent impacts on streams.     

Status and life history notes on the native fishes of the Alvord Basin, Oregon and Nevada

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