基于音乐基因的乐谱存储模型

本文提出一种基于音乐基因的乐谱存储模型S-MusicXML.将乐谱的存储和处理的基本单位由音阶提升到基因,有利于通过数据挖掘技术对音乐内涵的挖掘和存储.定义了旋律基因等概念,并通过实验进一步分析了挖掘音乐基因比挖掘音乐频繁模式更有优势.     

转录靶向性KDR启动子调控双自杀基因治疗肺癌的实验研究

从人肺癌细胞株中克隆KDR基因的启动子(kinasedomainreceptorpromotor,KDRp),构建KDR基因启动子调控的双自杀基因(CDglyTK)真核表达质粒pcDNA3-KDRp-CdglyTK,将其导入ECV304、L9981和NL9980细胞,建立相应的转基因细胞系,并应用不同的前药处理。体内、外实验结果显示:KDR启动子调控的双自杀基因在KDR高表达人肺癌细胞和人脐静脉内皮细胞靶向表达,而在KDR不表达的正常细胞或正常血管内皮细胞中未检测到双自杀基因表达;联合应用5-FC和GCV处理,对转双自杀基因细胞的杀伤作用显著高于单独应用5-FC或GCV,且二者显示了良好的药物协同作用。     

基于CRISPR/Cas9的毛果杨bHLH106转录因子的功能研究

目的 采用CRISPR/Cas9基因编辑系统创制毛果杨(Populus trichocarpa)bHLH106(Basic Helix-Loop-Helix 106)基因的突变体,分析植株的表型特征,初步揭示PtrbHLH106基因在毛果杨木材形成过程中的功能。方法 基于前期对毛果杨野生型(WT)茎干的不同细胞类型(形成层、木质部和韧皮部细胞)RNA-seq数据,克隆得到一个在形成层及木质部较高表达的bHLH基因PtrbHLH106。采用CRISPR/Cas9基因编辑技术创制毛果杨PtrbHLH106的功能缺失突变体。对生长60、90、120 d的毛果杨ptrbhlh106突变体和WT植株进行表型观察;对生长120 d的植株各茎节进行石蜡切片,利用甲苯胺蓝染色观察并进行细胞统计分析。结果 获得毛果杨ptrbhlh106突变体;与WT相比,突变体植株的株高、地径无明显差异;在整个测量的生长周期中,第8茎节长度有缩短的趋势,茎节数量有增加的趋势;形成层细胞层数有增加的趋势但差异不显著,导管细胞孔径显著增大,纤维细胞数量显著减少。结论 ptrbhlh106突变体与WT植株在导管孔径和纤维细胞数量上存在差异,初步证明PtrbHLH106基因参与了调控毛果杨次生木质部的发育。     

太空诱变宫颈癌细胞的差异表达基因初探

将搭载于“神舟四号”飞船飞行返地后的宫颈癌Caski细胞进行单克隆化,筛选出生长速度快于对照组、编号为44F10的细胞克隆,G1期细胞减少,S期细胞增多,成瘤能力增强;编号为48A9的细胞克隆细胞学行为与之相反,与对照组差异均有显著性(P<0.05)。为了解太空诱变肿瘤细胞生物学行为改变的机制,从分子水平入手研究经太空诱变的宫颈癌细胞和地面对照细胞的差异表达基因。应用含2747个人类肿瘤相关基因的Oligo双通道芯片研究差异表达基因。分别抽提44F10、48A9组和地面对照细胞的总RNA,逆转录cDNA并标记探针。将实验组和对照组cDNA探针混合,分别与同一张芯片杂交后,用不同的波长扫描荧光强度,从而筛选出差异基因。44F10组有16个基因呈现差异表达,48A9组有36个基因呈现差异表达。差异性表达主要涉及细胞凋亡、细胞增殖、细胞周期调控和信号转导的基因。促进细胞增殖的基因在44F10组中表达上调,而在48A9组中限制细胞增殖的基因表达上调。研究表明,太空诱变宫颈癌细胞的差异表达基因导致了细胞生物学行为的改变。     

Pedigree transmission disequilibrium test for quantitative traits in farm animals

General pedigrees are very common in farm animals,and the recent availability of large panels of SNPs in domestic species has given new momentum to the search for the mutations underlying variation in quantitative traits.In this paper,we proposed a new transmission disequilibrium test approach,called the pedigree transmission disequilibrium test,which deals with general pedigrees and quantitative traits in farm animals.Compared with the existing pedigree disequilibrium test (PDT) and general linear model-based method QTDT,our approach performed better with higher power and lower type I error,especially in scenarios where the quantitative trait locus (QTL) effect was small.We also investigated the application of our approach in selective genotyping design.Our simulation studies indicated that it was plausible to implement a selective genotyping strategy in the proposed pedigree transmission disequilibrium test.We found that our approach performed equally well or better when only some proportion of the individuals in the two tails were genotyped compared with its performance when all the individuals in the pedigree were genotyped.     

Identification of susceptibility genes loci associated with type 2 diabetes

In this study, we selected 10 susceptible SNPs loci to investigate their contribution to susceptibility to type 2 diabetes in Han Chinese among Hubei population. We genotyped SNPs rs5219, rs1801282, rs1470579, rs1111875, rs1081661, rs7754840, rs4506565, rs13266634, rs4402960, and rs5643981 by using the method of polymerase chain reaction-ligase detection reaction (PCR-LDR). In a case-control study, we have genotyped the 10 candidate susceptibility SNP loci, and here, we reported that the SNP rs5219 in KCNJ1...     

Identification of an S5n allele in Oryza rufipogon Griff. and its effect on embryo sac fertility

Oryza rufipogon exhibits abundant genetic diversity and contains many elite genes. In this work, a total of 441 accessions of O. rufipogon were genetically examined using the functional marker S5n, revealing that 18 accessions carried the S5n allele with a heterozygous genotype (S5nS5i/j). Of these accessions, 14 were from Guangdong Province, 2 from Guangxi Zhuang Autonomous Region, 1 from Hainan Province and 1 from Jiangxi Province. Further sequence analysis spanning both sides of the deletion in S5n allel...     

A combination of leaf rust resistance gene Lr34 and lesion mimic gene lm significantly enhances adult plant resistance to Puccinia triticina in wheat

Leaf rust caused by Puccinia triticina is an economically-important disease in wheat worldwide.A combination of different types of resistance genes may significantly enhance rust resistance under rust-favorable conditions.To investigate the interactions between the rust resistance gene Lr34 and the lesion mimic gene lm on 1BL in Ning 7840,a segregating F8-10 population of 180 recombinant inbred lines was developed from Ning 7840/Chokwang and evaluated for both lesion mimic expression and leaf rust response at the adult plant stage in a greenhouse.A major quantitative trait locus(QTL),derived from Sumai 3,was co-localized with Lr34 on chromosome 7D and explained 41.5% of phenotypic variations for rust severity and 22.1% for leaf tip necrosis(LTN).The presence of Lr34 was confirmed by Lr34-specific markers cssfr1 and cssfr2 in Ning 7840 and Sumai 3.Unlike Lr34,lm conditioned a spontaneous lesion mimic phenotype and had a significant effect on reducing uredinial size,and a smaller effect on severity.Additive effects were observed between lm and Lr34 for severity and LTN,and an epistatic effect was observed for infection type.Single marker analysis also identified several other QTL with minor effects on severity,infection type,or LTN.     

体育运动中的基因兴奋剂

WADA将基因或细胞兴奋剂定义为“能增强运动能力的基因，遗传元素和／或细胞的非治疗性的使用”．遗传学和基因学的新的研究结果不仅将用于疾病的诊断和治疗，而且还将用于试图增强机体的运动能力．用于治疗疾病的基因疗法，如贫血（EPO基因）、肌肉营养不良（IGF—I基因）和外周血管疾病（血管内皮生长因子基因）等，都可能被用于兴奋剂．为保护运动员的健康和保证公平竞争，IOC、WADA和ISF（国际体育联合会）已将提高运动能力的药物和方法定义为基因兴奋剂，并禁止其使用．