Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana

The genome of the flowering plant Arabidopsis thaliana has five chromosomes. Here we report the sequence of the largest, chromosome 1, in two contigs of around 14.2 and 14.6 megabases. The contigs extend from the telomeres to the centromeric borders, regions rich in transposons, retrotransposons and repetitive elements such as the 180-base-pair repeat. The chromosome represents 25% of the genome and contains about 6,850 open reading frames, 236 transfer RNAs (tRNAs) and 12 small nuclear RNAs. There are two clusters of tRNA genes at different places on the chromosome. One consists of 27 tRNA(Pro) genes and the other contains 27 tandem repeats of tRNA(Tyr)-tRNA(Tyr)-tRNA(Ser) genes. Chromosome 1 contains about 300 gene families with clustered duplications. There are also many repeat elements, representing 8% of the sequence.     

Applying the Clinical Inquiry Approach to Understand and Facilitate Enterprise Restructuring in Transitional Economies: A Case Study From the Moldovan Wine Industry

Enterprises in the Former Soviet Union (FSU) have had to fundamentally reform how they are managed and operate to cope with the switch from central planning to a more market based economy. In understanding these challenges and how firms are reacting to them, the clinical inquiry approach, a variant of action research, is deemed particularly appropriate. Research following this approach was conducted with a case study enterprise drawn from the Moldovan wine industry. The process encouraged self-diagnosis and intervention and a PSEFI (Problems, Strategies, Evaluations, and Future Issues) matrix was drawn to guide and assess the companys evolution. Reflections on the benefits of the clinical inquiry approach in transitional economies, compared to more conventional business support and research methods are discussed.     

A link between prompt optical and prompt gamma-ray emission in gamma-ray bursts

The prompt optical emission that arrives with the gamma-rays from a cosmic gamma-ray burst (GRB) is a signature of the engine powering the burst, the properties of the ultra-relativistic ejecta of the explosion, and the ejecta's interactions with the surroundings. Until now, only GRB 990123 had been detected at optical wavelengths during the burst phase. Its prompt optical emission was variable and uncorrelated with the prompt gamma-ray emission, suggesting that the optical emission was generated by a reverse shock arising from the ejecta's collision with surrounding material. Here we report prompt optical emission from GRB 041219a. It is variable and correlated with the prompt gamma-rays, indicating a common origin for the optical light and the gamma-rays. Within the context of the standard fireball model of GRBs, we attribute this new optical component to internal shocks driven into the burst ejecta by variations of the inner engine. The correlated optical emission is a direct probe of the jet isolated from the medium. The timing of the uncorrelated optical emission is strongly dependent on the nature of the medium.     

R gene expression induced by a type-III effector triggers disease resistance in rice

Disease resistance (R) genes in plants encode products that specifically recognise incompatible pathogens and trigger a cascade of events leading to disease resistance in the host plant. R-gene specificity is dictated by both host R genes and cognate avirulence (avr) genes in pathogens. However, the basis of gene-for-gene specificity is not well understood. Here, we report the cloning of the R gene Xa27 from rice and the cognate avr gene avrXa27 from Xanthomonas oryzae pv. oryzae. Resistant and susceptible alleles of Xa27 encode identical proteins. However, expression of only the resistant allele occurs when a rice plant is challenged by bacteria harbouring avrXa27, whose product is a nuclear localized type-III effector. Induction of Xa27 occurs only in the immediate vicinity of infected tissue, whereas ectopic expression of Xa27 resulted in resistance to otherwise compatible strains of the pathogen. Thus Xa27 specificity towards incompatible pathogens involves the differential expression of the R gene in the presence of the AvrXa27 effector.     

Recognition of transmembrane helices by the endoplasmic reticulum translocon

Membrane proteins depend on complex translocation machineries for insertion into target membranes. Although it has long been known that an abundance of nonpolar residues in transmembrane helices is the principal criterion for membrane insertion, the specific sequence-coding for transmembrane helices has not been identified. By challenging the endoplasmic reticulum Sec61 translocon with an extensive set of designed polypeptide segments, we have determined the basic features of this code, including a 'biological' hydrophobicity scale. We find that membrane insertion depends strongly on the position of polar residues within transmembrane segments, adding a new dimension to the problem of predicting transmembrane helices from amino acid sequences. Our results indicate that direct protein-lipid interactions are critical during translocon-mediated membrane insertion.     

A new interpretation of the sex determining mechanism of the European earwig,Forficula auricularia

Riassunto Osservazioni su femmine diForficula auricularia L. indicano che esse possiedono un solo cariotipo formato da 22 autosomi e da 2 cromosomiX. Sulla base di questo studio, suggeriamo che i maschi con 3 cromosomi sessuali sono del tipoXYY, e nonXXY come precedentemente ritenuto da varii autori. Ci sono maschiXY ₁t, XY₂, XY₂Y₂ e mosaiciXY ₂/XY₂Y₂ nella popolazione. Inoltre viene dimostrato che solamente il più grande dei due cromosomi Y, che caratterizzano questa specie, viene accumulato nei maschi con un meccanismo multiple di cromosomi sessuali.

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Supported by a postgraduate award from the Commonwealth of Australia to G.C.W. and by Public Health Service Grant No. GM-07212 from the Division of General Medical Sciences, U.S. National Institutes of Health and by a grant from the Australian Research Grants Committee.