Fluorescence spectroscopy and molecular dynamics simulations in studies on the mechanism of membrane destabilization by antimicrobial peptides

Since their initial discovery, 30 years ago, antimicrobial peptides (AMPs) have been intensely investigated as a possible solution to the increasing problem of drug-resistant bacteria. The interaction of antimicrobial peptides with the cellular membrane of bacteria is the key step of their mechanism of action. Fluorescence spectroscopy can provide several structural details on peptide–membrane systems, such as partition free energy, aggregation state, peptide position and orientation in the bilayer, and the effects of the peptides on the membrane order. However, these “low-resolution” structural data are hardly sufficient to define the structural requirements for the pore formation process. Molecular dynamics simulations, on the other hand, provide atomic-level information on the structure and dynamics of the peptide–membrane system, but they need to be validated experimentally. In this review we summarize the information that can be obtained by both approaches, highlighting their versatility and complementarity, suggesting that their synergistic application could lead to a new level of insight into the mechanism of membrane destabilization by AMPs.     

Extension of southern range and new specimens of the western gray squirrel, Sciurus griseus anthonyi (Mammalia: Sciuridae), in Baja California, México

We documented a southern range extension and new specimens of western gray squirrel ( Sciurus griseus anthonyi ) for the state of Baja California, México. The most recent specimen was collected in the town Cataviña and represents the southernmost record for the species and subspecies. Repeated observations of individuals in this new location suggest the presence of a marginal population in Mediterranean chaparral–desert scrub transition vegetation. Documentamos la extension de ámbito más sureño y nuevos especímenes de a ardilla gris occidental ( Sciurus griseus anthonyi ) para el Estado de Baja California, México. El espécimen más reciente fue recolectado en el poblado de Cataviña y representa el registro más sureño para la especie y subespecie. Observaciones repetidas de individuos en esta última localidad sureña sugiere la presencia de una población marginal en vegetación de transición de chaparral mediterráneo–matorral desértico.     

Mathematical,Philosophical and Semantic Considerations on Infinity (I): General Concepts

In the Reality we know, we cannot say if something is infinite whether we are doing Physics, Biology, Sociology or Economics. This means we have to be careful using this concept. Infinite structures do not exist in the physical world as far as we know. So what do mathematicians mean when they assert the existence of ω (the mathematical symbol for the set of all integers)? There is no universally accepted philosophy of mathematics but the most common belief is that mathematics touches on another worldly absolute truth. Many mathematicians believe that mathematics involves a special perception of an idealized world of absolute truth. This comes in part from the recognition that our knowledge of the physical world is imperfect and falls short of what we can apprehend with mathematical thinking. The objective of this paper is to present an epistemological rather than an historical vision of the mathematical concept of infinity that examines the dialectic between the actual and potential infinity.     

Membrane-shed vesicles from the parasite <Emphasis Type="Italic">Trichomonas vaginalis</Emphasis>: characterization and their association with cell interaction

Trichomonas vaginalis is a common sexually transmitted parasite that colonizes the human urogenital tract, where it remains extracellular and adheres to epithelial cells. Infections range from asymptomatic to highly inflammatory, depending on the host and the parasite strain. Despite the serious consequences associated with trichomoniasis disease, little is known about parasite or host factors involved in attachment of the parasite-to-host epithelial cells. Here, we report the identification of microvesicle-like structures (MVs) released by T. vaginalis. MVs are considered universal transport vehicles for intercellular communication as they can incorporate peptides, proteins, lipids, miRNA, and mRNA, all of which can be transferred to target cells through receptor–ligand interactions, fusion with the cell membrane, and delivery of a functional cargo to the cytoplasm of the target cell. In the present study, we demonstrated that T. vaginalis release MVs from the plasma and the flagellar membranes of the parasite. We performed proteomic profiling of these structures demonstrating that they possess physical characteristics similar to mammalian extracellular vesicles and might be selectively charged with specific protein content. In addition, we demonstrated that viable T. vaginalis parasites release large vesicles (LVs), membrane structures larger than 1 µm that are able to interact with other parasites and with the host cell. Finally, we show that both populations of vesicles present on the surface of T vaginalis are induced in the presence of host cells, consistent with a role in modulating cell interactions.     

Evaluating early warning and coincident indicators of business cycles using smooth trends

We present a composite coincident indicator designed to capture the state of the Spanish economy. Our approach, based on smooth trends, guarantees that the resulting indicators are reasonably smooth and issue stable signals, reducing the uncertainty. The coincident indicator has been checked by comparing it with the one recently proposed by the Spanish Economic Association index. Both indexes show similar behavior and ours captures very well the beginning and end of the official recessions and expansion periods. Our coincident indicator also tracks very well alternative mass media indicators typically used in the political science literature. We also update our composite leading indicator (Bujosa et al., Journal of Forecasting, 2013, 32(6), 481–499). It systematically predicts the peaks and troughs of the new Spanish Economic Association index and provides significant aid in forecasting annual gross domestic product growth rates. Using only real data available at the beginning of each forecast period, our indicator one-step-ahead forecast shows improvements over other individual alternatives and different forecast combinations.     

Mesenchymal stem cells from preterm to term newborns undergo a significant switch from anaerobic glycolysis to the oxidative phosphorylation

We evaluated the energy metabolism of human mesenchymal stem cells (MSC) isolated from umbilical cord (UC) of preterm (< 37 weeks of gestational age) and term (≥ 37 weeks of gestational age) newborns, using MSC from adult bone marrow as control. A metabolic switch has been observed around the 34th week of gestational age from a prevalently anaerobic glycolysis to the oxidative phosphorylation. This metabolic change is associated with the organization of mitochondria reticulum: preterm MSCs presented a scarcely organized mitochondrial reticulum and low expression of proteins involved in the mitochondrial fission/fusion, compared to term MSCs. These changes seem governed by the expression of CLUH, a cytosolic messenger RNA-binding protein involved in the mitochondria biogenesis and distribution inside the cell; in fact, CLUH silencing in term MSC determined a metabolic fingerprint similar to that of preterm MSC. Our study discloses novel information on the production of energy and mitochondrial organization and function, during the passage from fetal to adult life, providing useful information for the management of preterm birth.     

Population dynamics and phenology of two congeneric and sympatric lynx spiders Peucetia rubrolineata Keyserling, 1877 and Peucetia flava Keyserling, 1877 (Oxyopidae)

Numerous phenological studies on spiders belonging to the families Oxyopidae, Thomisidae, Lycosidae, Selenopidae (e.g. Selenops cocheleti) and Salticidae (e.g. Psecas chapoda and Psecas viridipurpureus) have been conducted in the neotropical region. However, studies that simultaneously compare population dynamics and age structure in populations of sympatric species are limited, especially in Oxyopidae. The population dynamics and phenology of two congeneric lynx spider (Peucetia rubrolineata and Peucetia flava) were examined in southeastern Brazil. Several characteristics of the age structure were compared between the two spider species. The variation in the total abundance of individuals and age structure and their relationship with climatic variables were similar between the two spiders. Adults of these spiders were present mainly in spring, indicating an annual reproductive cycle and a ‘stenochronous spring’ phenological pattern. The recruitment of spiders occurred in summer for P. rubrolineata and P. flava, followed by successive phenological peaks at all stages of development. Rainfall and temperature had a positive correlation to population flux in the two spider species studied. Despite the significant climatic effects observed in the Serra do Japi, the phenological pattern of the population in this study was not always repeated in other species of spiders (e.g. Selenops cocheleti).