Nucleotide sequence evidence for relationship of AIDS retrovirus to lentiviruses

Lentiviruses are a subfamily of retroviruses which have been aetiologically linked to the induction of arthritis, encephalitis, progressive pneumonia and slow neurological diseases in certain species. Relatively little is known about their genome structure, mechanisms of pathogenesis or evolutionary relationships with other retroviral subfamilies. In an effort to understand better the mechanisms by which these viruses induce such a variety of chronic diseases, we have molecularly cloned and physically characterized the genomes of caprine arthritis-encephalitis virus (CAEV) and equine infectious anaemia virus (EIAV) (A.Y. et al., in preparation). The latter, which bears some morphological similarity to the lentiviruses, has yet to be classified definitively as one. Here, we have determined the nucleotide sequence of a highly conserved region within the CAEV and EIAV pol genes. We demonstrate a much closer relationship of their predicted pol gene products to that of the presumed aetiological agent of human acquired immune deficiency syndrome (AIDS) than to those of other retroviruses. Additional pairwise comparisons allowed us to generate an evolutionary tree showing that the pol genes of lentiviruses and oncoviruses have evolved from a common progenitor.     

Aeolian processes at the Mars Exploration Rover Meridiani Planum landing site

The martian surface is a natural laboratory for testing our understanding of the physics of aeolian (wind-related) processes in an environment different from that of Earth. Martian surface markings and atmospheric opacity are time-variable, indicating that fine particles at the surface are mobilized regularly by wind. Regolith (unconsolidated surface material) at the Mars Exploration Rover Opportunity's landing site has been affected greatly by wind, which has created and reoriented bedforms, sorted grains, and eroded bedrock. Aeolian features here preserve a unique record of changing wind direction and wind strength. Here we present an in situ examination of a martian bright wind streak, which provides evidence consistent with a previously proposed formational model for such features. We also show that a widely used criterion for distinguishing between aeolian saltation- and suspension-dominated grain behaviour is different on Mars, and that estimated wind friction speeds between 2 and 3 m s(-1), most recently from the northwest, are associated with recent global dust storms, providing ground truth for climate model predictions.     

Global histone modification patterns predict risk of prostate cancer recurrence

Aberrations in post-translational modifications of histones have been shown to occur in cancer cells but only at individual promoters; they have not been related to clinical outcome. Other than being targeted to promoters, modifications of histones, such as acetylation and methylation of lysine and arginine residues, also occur over large regions of chromatin including coding regions and non-promoter sequences, which are referred to as global histone modifications. Here we show that changes in global levels of individual histone modifications are also associated with cancer and that these changes are predictive of clinical outcome. Through immunohistochemical staining of primary prostatectomy tissue samples, we determined the percentage of cells that stained for the histone acetylation and dimethylation of five residues in histones H3 and H4. Grouping of samples with similar patterns of modifications identified two disease subtypes with distinct risks of tumour recurrence in patients with low-grade prostate cancer. These histone modification patterns were predictors of outcome independently of tumour stage, preoperative prostate-specific antigen levels, and capsule invasion. Thus, widespread changes in specific histone modifications indicate previously undescribed molecular heterogeneity in prostate cancer and might underlie the broad range of clinical behaviour in cancer patients.     

双—N(2-羟基乙基)β-雷锁醛亚胺合镍(Ⅱ)、铜(Ⅱ)的合成及其抗癌活性的研究

本文报导了双—N(2—羟基乙基)β—雷锁醛亚胺合镍(Ⅱ)和双—N(2—羟基乙基)β—雷锁醛亚胺合铜(Ⅱ)的合成,它们的组成已由元素分析和红外光谱所证实。抗癌活性试验表明,双—N(2—羟基乙基)β—雷锁醛亚胺合镍(Ⅱ)对肿瘤模型S_(180)(A)及艾氏腹水癌均有较好的抑制作用.     

Highly Sensitive and Portable Gas Sensing System Based on Reduced Graphene Oxide

Graphene has been widely used in gas-sensing applications due to its large specific surface area and strong adsorption ability. Among different forms of graphene used as gas-sensing materials, reduced graphene oxide is one of the most convenient and economical materials to integrate with Si-based electronics, which is very important to graphene-based gas sensors. In addition, the stacking structure of graphene oxide flakes facilitates absorption and detection of gas molecules. Based on reduced graphene oxide, a highly sensitive and portable gas-sensing system was demonstrated here. Solution-based graphene oxide was cast on a chip like a TF memory card and then reduced thermally. A signal acquisition system was designed to monitor resistance variation as a sign of gas concentration. This miniature graphene-based gas sensor array demonstrates a new path for the use of graphene in gas-detection technologies. And the creation of a sensitive and portable graphene gas sensor also shows great potential in fields such as medicine and environmental science.     

Bioleaching of zinc from gold ores using Acidithiobacillus ferrooxidans

The present work investigated microbial leaching of zinc from ore using Acidithiobacillus ferrooxidans (ATCC 14859). The ore samples, consisted of 13wt% zinc, were obtained from a gold mine in north-eastern Thailand. A shake flask study was performed on the ore samples using a rotary shaker under the following fixed conditions (250 r·min⁻¹, 30°C for 16 d). The influence of various conditions, namely medium type (with and without iron), particle ore size (<20, 20-40, 40-60, 60-100, and >100 mesh), ore density (20 kg·m⁻³, 50 kg·m⁻³, and 100 kg·m⁻³), and pH of the medium (2, 2.5, 2.8, and 3), were investigated. The microbial leaching was assessed by determining the concentration of zinc in the medium and compared with the initial sample concentration. The results show that Acidithiobacillus ferrooxidans can successfully leach zinc by as much as 6 times compared with the control experiment (without Acidithiobacillus ferrooxidans ferrooxidans). The maximum efficiency (92.3%) for microbial leaching is obtained in iron-containing medium, 20-40 mesh ore sizes, 20 kg·m⁻³ ore density at pH 2.8, and the zinc content is found in the medium at about 120 mg·L⁻¹.     

6—BA对平菇菌丝体生长及新陈代谢的影响

平菇在马铃薯液体培养基的基础上,通过添加不同浓度的6一BA,探讨6—BA对平菇菌丝体生长及新陈代谢的影响。结果表明:低浓度6—BA对平菇菌丝体生长具促进作用,而且使蛋白质和核酸含量增加;高浓度6—BA则逐渐显示抑制作用,其最适作用浓度为1.5ppm,而6—BA对平菇菌丝体可溶性糖含量无明显影响。     

Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma

Follicular lymphoma (FL) and diffuse large B-cell lymphoma (DLBCL) are the two most common non-Hodgkin lymphomas (NHLs). Here we sequenced tumour and matched normal DNA from 13 DLBCL cases and one FL case to identify genes with mutations in B-cell NHL. We analysed RNA-seq data from these and another 113 NHLs to identify genes with candidate mutations, and then re-sequenced tumour and matched normal DNA from these cases to confirm 109 genes with multiple somatic mutations. Genes with roles in histone modification were frequent targets of somatic mutation. For example, 32% of DLBCL and 89% of FL cases had somatic mutations in MLL2, which encodes a histone methyltransferase, and 11.4% and 13.4% of DLBCL and FL cases, respectively, had mutations in MEF2B, a calcium-regulated gene that cooperates with CREBBP and EP300 in acetylating histones. Our analysis suggests a previously unappreciated disruption of chromatin biology in lymphomagenesis.     

Replacement of huntingtin exon 1 by trans-splicing

Huntington’s disease (HD) is an autosomal-dominant neurodegenerative disorder caused by polyglutamine expansion in the amino-terminus of huntingtin (HTT). HD offers unique opportunities for promising RNA-based therapeutic approaches aimed at reducing mutant HTT expression, since the HD mutation is considered to be a “gain-of-function” mutation. Allele-specific strategies that preserve expression from the wild-type allele and reduce the levels of mutant protein would be of particular interest. Here, we have conducted proof-of-concept studies to demonstrate that spliceosome-mediated trans-splicing is a viable molecular strategy to specifically repair the HTT allele. We employed a dual plasmid transfection system consisting of a pre-mRNA trans-splicing module (PTM) containing HTT exon 1 and a HTT minigene to demonstrate that HTT exon 1 can be replaced in trans. We detected the presence of the trans-spliced RNA in which PTM exon 1 was correctly joined to minigene exons 2 and 3. Furthermore, exon 1 from the PTM was trans-spliced to the endogenous HTT pre-mRNA in cultured cells as well as disease-relevant models, including HD patient fibroblasts and primary neurons from a previously described HD mouse model. These results suggest that the repeat expansion of HTT can be repaired successfully not only in the context of synthetic minigenes but also within the context of HD neurons. Therefore, pre-mRNA trans-splicing may be a promising approach for the treatment of HD and other dominant genetic disorders.