Small changes in expression affect predisposition to tumorigenesis.

We have used quantitative measures of gene expression to show that constitutional 50% decreases in expression of one adenomatous polyposis coli tumor suppressor gene (APC) allele can lead to the development of familial adenomatous polyposis.     

Stimulated platelets use serotonin to enhance their retention of procoagulant proteins on the cell surface.

Activated platelets bind numerous adhesive and procoagulant proteins by receptor-mediated processes. Although there is little evidence to suggest that these processes are heterogeneous in platelets, we previously found that platelets co-stimulated with collagen and thrombin express functional alpha-granule factor V only on a subpopulation of cells. Here we show that these cells, referred to as 'COAT-platelets', bind additional alpha-granule proteins, including fibrinogen, von Willebrand factor, thrombospondin, fibronectin and alpha2-antiplasmin. These proteins are all transglutaminase substrates, and inhibitors of transglutaminase prevent the production of COAT-platelets. A synthetic transglutaminase substrate (CP15) also binds to COAT-platelets, and analysis by high performance liquid chromatography/mass spectrometry shows that a product is formed with a relative molecular mass (Mr) equal to CP15 plus 176. Serotonin, an abundant component of platelet-dense granules, has an Mr of 176, and fibrinogen isolated from COAT-platelets contains covalently linked serotonin. Synthetic bovine serum albumin-(serotonin)6 binds selectively to COAT-platelets and also inhibits the retention of procoagulant proteins on COAT-platelets. These data indicate that COAT-platelets use serotonin conjugation to augment the retention of procoagulant proteins on their cell surface through an as yet unidentified serotonin receptor.     

Small mammals within riparian habitats of a regulated and unregulated arid land river

In northwestern Colorado, flow regulation on the Green River has created a transitional plant community that features encroachment by upland vegetation into cottonwood ( Populus fremontii )-dominated, riparian forest on topographically high floodplain sites and reduced cottonwood regeneration on low floodplain sites. To assess how these changes might have affected small mammal distributions, in 1994 and 1995 we live-trapped during periods surrounding spring flooding at 3 sites: above and below the confluence of the regulated Green River and at the ecologically similar, but unregulated, Yampa River (reference site). More species were captured at the most regulated site along the Green River above its confluence with the Yampa River. Within sites, more species were captured in riparian habitats than adjacent upland habitats. Despite river regulation-induced habitat changes, we did not detect changes in species distributions within low and high floodplain habitat for Peromyscus maniculatus or Microtus montanus , but changes may have occurred for Dipodomys ordii . The total effect of regulation-induced habitat change on small mammal populations may not be fully revealed until current, mature cottonwood forests disappear and associated woody debris decomposes.     

Populations and habitat relationships of Piute ground squirrels in southwestern Idaho

Piute ground squirrels ( Spermophilus mollis idahoensis ) are normally above ground from late January until late June or early July in the Snake River Birds of Prey National Conservation Area in southwestern Idaho. In 2002 they were rarely seen above ground after early May. Because of the ecological importance of ground squirrels for nesting raptors and other species, we sought to determine the reasons for their early disappearance. We sampled 12 sites from January 2003 through March 2003 to determine if a population crash had occurred in 2002. Tests indicated that Piute ground squirrels had not been exposed to plague within the past year. The presence of yearlings in the population indicated that squirrels reproduced in 2002 and that at least some yearlings survived the winter. Both yearling and adult squirrels appeared to be reproducing at or above normal rates in 2003. The most plausible explanation for the early disappearance of Piute ground squirrels in 2002 is that squirrels entered seasonal torpor early in response to a late spring drought. In addition, the breeding chronology of squirrels may have shifted during the past 2 decades in response to climate change and/or habitat alteration. Shrub habitats provide a more favorable and stable environment for squirrels than grass habitats. Squirrel abundance was higher on live-trapping grids with sagebrush than on grids dominated by grass, and squirrel masses were higher at sites dominated by shrubs and Sandberg bluegrass ( Poa secunda ). Densities in big sagebrush ( Artemisia tridentata ) were within the ranges reported for earlier years, but densities in grass were lower than previously reported. Low densities at grassland sites in 2003 support other findings that drought affects squirrels in altered grass communities more than those in native shrub habitats. Long-term shifts in ground squirrel breeding chronology may have implications for raptors that depend on them for food.     

Status and distribution of American White Pelican nesting colonies in Wyoming: an update

Historically, one American White Pelican nesting area was known in Wyoming. In 1986 White Pelicans nested at four locations consisting of four different colonies and approximately 949 active nests. Nesting success was probably adequate for population stability at Pathfinder Reservoir from 1984 through 1986 and at Yellowstone Lake in 1984 and 1985, but insufficient there in 1986. White Pelican colonies at Bamforth and Cooper lakes most likely failed because of predation. With the exception of the Yellowstone Lake colony, the future of White Pelican nesting colonies in Wyoming is uncertain. Current threats are human disturbance of nesting birds, predation, and loss of habitat, including breeding areas and foraging sites.     

Food habits and dietary overlap of nongame insectivorous fishes in Flint Creek, Oklahoma, a western Ozark foothills stream

Insectivorous fishes were sampled from March, 1983 to February 1984, in Flint Creek, Delaware Co., Oklahoma. There was insignificant habitat segregation between Etheostoma spectabile and E. punctulatum and seasonal habitat partitioning between Cottus carolinae and both darters. Mature E. spectabile ate primarily chironomids and mayflies, whereas juveniles fed primarily on microcrustaceans. Mature E. punctulatum consumed fewer Ephemerella and Leptophlebia than E. spectabile , feeding on Stenonema and other crustaceans. Juvenile E. punctulatum fed mainly on amphipods and mayflies, and juvenile E. spectabile ate primarily microcrustaceans. Cottus carolinae elected primarily mayflies in spring - summer and chironomids in January - February. Coefficients of dietary overlap were highest between larger E. spectabile and juvenile E. punctulatum and lowest between immature E. spectabile and mature E. punctulatum . Overlap between the two darters was significantly correlated with differences in mean prey size (p E. spectabile was also significantly correlated to differences in mean prey sizes. Etheostoma spectabile generally preferred smaller prey than E. punctulatum . All three species avoided Stenelmis . Cottus carolinae avoided microcrustaceans. The study showed that resource partitioning among these three insectivorous fishes is affected by complex interactions of habitat and prey electivity, and prey size selectivity.         

Computation in cognitive science: it is not all about Turing-equivalent computation

It is sometimes suggested that the history of computation in cognitive science is one in which the formal apparatus of Turing-equivalent computation, or effective computability, was exported from mathematical logic to ever wider areas of cognitive science and its environs. This paper, however, indicates some respects in which this suggestion is inaccurate. Computability theory has not been focused exclusively on Turing-equivalent computation. Many essential features of Turing-equivalent computation are not captured in definitions of computation as (digital) symbol manipulation. Turing-equivalent computation did not play the role in McCulloch and Pitts’s early cybernetic work that is sometimes attributed to it. Finally, various segments of the neuroscientific community invoke a notion of computation that differs from the Turing-equivalent notion.     

The generic name of the North American musk turtles

Although several recent workers have used the name Sternothaerus for the North American musk turtles, the rules of priority render Sternotherus the correct name for them. The generic type fixation by Stejneger of S. odoratus is accepted.     

Numeric analysis of the lizard genus Sceloporus with special reference to cranial osteology

Phylogenetic relationships among Sceloporine genera are briefly discussed. Species relationships within the genus Sceloporus are analyzed, and evolutionary lines of descent are proposed. The genus Sceloporus is composed of three monophyletic groups: Group I, the most primitive, probably developed from Sator - like ancestral stock in Miocene times. This group speciated from stock similar to Sceloporus gadoviae in southern Mexico to S. merriami in the North and contains 7 species in 3 species groups. We propose that these species be included in the genus Lysoptychus Cope. Group II arose from Group I and evolved from centrally located Sceloporus pictus in all directions throughout Mexico. This intermediate group contains approximately 19 species in 5 species groups. Group III also arose from the primitive stock of Group I and radiated from several desert refugia created by Pleistocene glaciation. Evolution of this group in Mexico was generally from north to south with Sceloporus malachiticus extending as far south as Panama. This group contains approximately 33 species in 5 species groups.     

Three new species of Nearctic Isoperla (Plecoptera)

Nymphs and adults of three new species of Isoperla are described from reared material. I. sagittata is known only from southeastern Texas, I. Coushatta has been collected in East Texas and Oklahoma, and I. jewetti occurs in the Basin and Range Mountains of West Texas. The male aedeagii, female subgenital plates, and nymphal mouthparts are diagnostic in all three species.