Burrowing Owl nest success and burrow longevity in north central Oregon

We studied nest success, burrow longevity, and rates of burrow reuse for a migratory population of Burrowing Owl ( Athene cunicularia ) in north central Oregon from 1995 to 1997. Nest success varied annually from 50% to 67%. Principal causes of nest failure were desertion (26%) and depredation by badgers ( Taxidea taxus ; 13%). Reuse of available nest and satellite burrows in subsequent years was 87% in 1996 and 57% in 1997. Reuse was highest at burrows in sandy soils, which may indicate that nest-site availability is a limiting factor in sandier soil types. Trampling by livestock resulted in the loss of 24% of all burrows between one season and the next, and natural erosion resulted in closure of 17%. Both causes of burrow failure occurred more frequently in soils with a sand component due to their friable nature. We recommend that habitat used by livestock be evaluated for use by Burrowing Owls, that occupied areas be managed to minimize destruction of burrows by livestock, and that predator-control efforts be revised to exclude mortality of badgers.     

Short-term effects of a prescribed burn on songbirds and vegetation in mountain big sagebrush

I measured songbird abundance and vegetation cover in and around a 420-ha prescribed burn in a mountain big sagebrush community located at 2133 m elevation. Data were collected during the 3rd growing season after the fire. Brewer's Sparrow and Sage Thrasher occurred in lower abundance on sites that were largely or completely burned relative to sites that were outside the fire perimeter or within unburned islands of shrubs. The number of Brewer's Sparrow detections was linearly related to remaining sagebrush cover. In contrast, Horned Lark occurred at higher abundances on sites where shrub cover had been removed in the prescribed burn. Cover of perennial grasses and cover of 4 of the 5 most common forbs was greater on burned sites than on unburned sites.     

A repeat expansion in the gene encoding junctophilin-3 is associated with Huntington disease-like 2.

We recently described a disorder termed Huntington disease-like 2 (HDL2) that completely segregates with an unidentified CAG/CTG expansion in a large pedigree (W). We now report the cloning of this expansion and its localization to a variably spliced exon of JPH3 (encoding junctophilin-3), a gene involved in the formation of junctional membrane structures.     

Structure of the guanine-nucleotide-binding domain of the Ha-ras oncogene product p21 in the triphosphate conformation

The crystal structure of the guanine-nucleotide-binding domain of p21 (amino acids 1-166) complexed to the guanosine triphosphate analogue guanosine-5'-(beta, gamma-imido)triphosphate (GppNp) has been determined at a resolution of 2.6 A. The topological order of secondary structure elements is the same as that of the guanine-nucleotide-binding domain of bacterial elongation factor EF-Tu. Many interactions between nucleotide and protein have been identified. The effects of point mutations and the conservation of amino-acid sequence in the guanine-nucleotide-binding proteins are discussed.     

A mid－Holocene drought interval as evidenced by lake desiccation in the Alashan Plateau,Inner Mongolia,China

The mid-Holocene in China is traditionally thought to be a warm and humid period with a strong sum-mer monsoon, and is often termed the Holocene Climatic Optimum or Megathermal Period. Here we present lakegeomorphologic and lithologicai evidence from the Alashan Plateau, part of the Mongolian Plateau, that indicates stronglake desiccation during the mid-Holocene. High resolution pollen data from Zhuyeze Lake, at the present summermonsoon margin, is also presented. These data show that present lakes and wetlands in the Juyanze Lake basin west of the Badain Jaran desert, in the Zhuyeze Lake basin between the Badain Jaran and Tengger deserts, and in lakes in the eastern Tengger desert, dried or experienced low lake levelsin the mid-Holocene around 5000-7000 cal yr BP. Pollen data further indicate that the vegetation cover declined in both the local areas and in the Qilian Mountains, suggesting the climate was drier than that associated with the presentAsian summer monsoon. This mid-Holocene drought interval was present throughout a quite large region of the south In-ner Mongolian Plateau. The period was also probably colder,at least in the high Asian plateaus and mountains.     

Highly efficient endogenous human gene correction using designed zinc-finger nucleases

Permanent modification of the human genome in vivo is impractical owing to the low frequency of homologous recombination in human cells, a fact that hampers biomedical research and progress towards safe and effective gene therapy. Here we report a general solution using two fundamental biological processes: DNA recognition by C2H2 zinc-finger proteins and homology-directed repair of DNA double-strand breaks. Zinc-finger proteins engineered to recognize a unique chromosomal site can be fused to a nuclease domain, and a double-strand break induced by the resulting zinc-finger nuclease can create specific sequence alterations by stimulating homologous recombination between the chromosome and an extrachromosomal DNA donor. We show that zinc-finger nucleases designed against an X-linked severe combined immune deficiency (SCID) mutation in the IL2Rgamma gene yielded more than 18% gene-modified human cells without selection. Remarkably, about 7% of the cells acquired the desired genetic modification on both X chromosomes, with cell genotype accurately reflected at the messenger RNA and protein levels. We observe comparably high frequencies in human T cells, raising the possibility of strategies based on zinc-finger nucleases for the treatment of disease.