Insights into SCF ubiquitin ligases from the structure of the Skp1-Skp2 complex

F-box proteins are members of a large family that regulates the cell cycle, the immune response, signalling cascades and developmental programmes by targeting proteins, such as cyclins, cyclin-dependent kinase inhibitors, IkappaBalpha and beta-catenin, for ubiquitination (reviewed in refs 1-3). F-box proteins are the substrate-recognition components of SCF (Skp1-Cullin-F-box protein) ubiquitin-protein ligases. They bind the SCF constant catalytic core by means of the F-box motif interacting with Skp1, and they bind substrates through their variable protein-protein interaction domains. The large number of F-box proteins is thought to allow ubiquitination of numerous, diverse substrates. Most organisms have several Skp1 family members, but the function of these Skp1 homologues and the rules of recognition between different F-box and Skp1 proteins remain unknown. Here we describe the crystal structure of the human F-box protein Skp2 bound to Skp1. Skp1 recruits the F-box protein through a bipartite interface involving both the F-box and the substrate-recognition domain. The structure raises the possibility that different Skp1 family members evolved to function with different subsets of F-box proteins, and suggests that the F-box protein may not only recruit substrate, but may also position it optimally for the ubiquitination reaction.     

Elevated UV-B radiation reduces genome stability in plants

Long-term depletion of the stratospheric ozone layer contributes to an increase in terrestrial solar ultraviolet-B radiation. This has deleterious effects on living organisms, such as DNA damage. When exposed to elevated ultraviolet-B radiation (UV-B; 280-315 nm), plants display a wide variety of physiological and morphological responses characterized as acclimation and adaptation. Here we show, using special sun simulators, that elevated solar UV-B doses increase the frequency of somatic homologous DNA rearrangements in Arabidopsis and tobacco plants. Increases in recombination are accompanied by a strong induction of photolyase and Rad51 gene expression. These genes are putatively involved in major DNA repair pathways, photoreactivation and recombination repair. In mutant Arabidopsis plants that are deficient in photoreactivating ultraviolet-induced cyclobutane pyrimidine dimers, recombination under elevated UV-B regimes greatly exceeds wild-type levels. Our results show that homologous recombination repair pathways might be involved in eliminating UV-B-induced DNA lesions in plants. Thus, increases in terrestrial solar UV-B radiation as forecasted for the early 21st century may affect genome stability in plants.     

Predictivism and the periodic table

This is a comment on the paper by Barnes (2005) and the responses from Scerri (2005) and Worrall (2005), debating the thesis (‘predictivism’) that a fact successfully predicted by a theory is stronger evidence than a similar fact known before the prediction was made. Since Barnes and Scerri both use evidence presented in my paper on Mendeleev’s periodic law (Brush, 1996) to support their views, I reiterate my own position on predictivism. I do not argue for or against predictivism in the normative sense that philosophers of science employ, rather I describe how scientists themselves use facts and predictions to support their theories. I find wide variations, and no support for the assumption that scientists use a single ‘Scientific Method’ in deciding whether to accept a proposed new theory.     

美国东北部早熟和晚熟玉米杂交种年际间产量稳定性

玉米是美国东北部奶牛业的主要能量来源，杂交种的选择是提高玉米产量、降低生产成本的关键和前提。连续5年在美国麻省大学农学实验站的典型砂壤土耕地上进行试验，结合当地气象部门提供的生育期间玉米的生长期生长度日数和降雨量，对3个早熟杂交种和3个晚熟杂交种的产量进行了年际间稳定性比较。结果表明：产量与年际间气候条件无关，无论是青贮饲料产量还是穗棒产量，晚熟品种的产量均高于早熟品种（2001年杂交种E409L）。5年平均晚熟品种的青贮饲料产量和穗棒产量分别比早熟品种高出10．9％和8．0％。相同年份品种间产量存在差异，同一品种年际间产量差异显著。低温年份，相对冷凉的生育前期和温热的生育后期不利于美国东北部玉米生产。生育期间较高的降雨量有利于青贮产量的形成。选择种植晚熟品种是该区农民提高玉米产量、降低生产成本的有效途径。只有热量多且雨量充沛的年份才有利于玉米产量潜力的挖掘。有关某种玉米基因型对当地气候适应性方面的知识，将有利于育种者选择有价值的种质资源。表6，参17。     

Functional Materials for Catalytic and Magnetic Applications

1 Introduction Metal, metal oxide and metal compound nanoparticles (NPs) received considerable attention due to their unique properties: catalytic, magnetic, optical, electronic, etc. We believe that for different applications, there are preferable morphologies of NP-stabilizing medium composites. For example, small (1-3 nm) nanoparticles formed in micro/mesoporous hypercrosslinked polystyrene demonstrate excellent catalytic properties in various hydrogenation and oxidation reactions due to high surface...