Epistasis between mouse Klra and major histocompatibility complex class I loci is associated with a new mechanism of natural killer cell-mediated innate resistance to cytomegalovirus infection

Experimental infection with mouse cytomegalovirus (MCMV) has been used to elucidate the intricate host-pathogen mechanisms that determine innate resistance to infection. Linkage analyses in F(2) progeny from MCMV-resistant MA/My (H2 (k)) and MCMV-susceptible BALB/c (H2 (d)) and BALB.K (H2 (k)) mouse strains indicated that only the combination of alleles encoded by a gene in the Klra (also called Ly49) cluster on chromosome 6, and one in the major histocompatibility complex (H2) on chromosome 17, is associated with virus resistance. We found that natural killer cell-activating receptor Ly49P specifically recognized MCMV-infected cells, dependent on the presence of the H2 (k) haplotype. This binding was blocked using antibodies to H-2D(k) but not antibodies to H-2K(k). These results are suggestive of a new natural killer cell mechanism implicated in MCMV resistance, which depends on the functional interaction of the Ly49P receptor and the major histocompatibility complex class I molecule H-2D(k) on MCMV-infected cells.     

Control of gene expression by a natural metabolite-responsive ribozyme

Most biological catalysts are made of protein; however, eight classes of natural ribozymes have been discovered that catalyse fundamental biochemical reactions. The central functions of ribozymes in modern organisms support the hypothesis that life passed through an 'RNA world' before the emergence of proteins and DNA. We have identified a new class of ribozymes that cleaves the messenger RNA of the glmS gene in Gram-positive bacteria. The ribozyme is activated by glucosamine-6-phosphate (GlcN6P), which is the metabolic product of the GlmS enzyme. Additional data indicate that the ribozyme serves as a metabolite-responsive genetic switch that represses the glmS gene in response to rising GlcN6P concentrations. These findings demonstrate that ribozyme switches may have functioned as metabolite sensors in primitive organisms, and further suggest that modern cells retain some of these ancient genetic control systems.     

Algal biomass as a global source of transport fuels: Overview and development perspectives

As a result of the global fuel crisis of the early 1970 s,coupled with concerns for the environment,the use of biofuel has been on the increase in many regions throughout the world.At present,a total of approximately 30 billion(30×109) liters of biofuel are utilized worldwide annually,although most countries rely hugely on the first generation biofuel.The limitations of the first and second generation biofuel gave rise to current interest in algae as a promising alternative to these conventional biofuel sources.Algal biomass could provide a lion’s share of the global transport fuel requirements in future.The present review highlights some important developments in,and potentials of algaculture as a major biomass resource of the future.However,the major constraint to commercial-scale algae farming for energy production is the cost factor,which must be addressed adequately before its potentials can be harnessed.     

Genes mirror geography within Europe

Understanding the genetic structure of human populations is of fundamental interest to medical, forensic and anthropological sciences. Advances in high-throughput genotyping technology have markedly improved our understanding of global patterns of human genetic variation and suggest the potential to use large samples to uncover variation among closely spaced populations. Here we characterize genetic variation in a sample of 3,000 European individuals genotyped at over half a million variable DNA sites in the human genome. Despite low average levels of genetic differentiation among Europeans, we find a close correspondence between genetic and geographic distances; indeed, a geographical map of Europe arises naturally as an efficient two-dimensional summary of genetic variation in Europeans. The results emphasize that when mapping the genetic basis of a disease phenotype, spurious associations can arise if genetic structure is not properly accounted for. In addition, the results are relevant to the prospects of genetic ancestry testing; an individual's DNA can be used to infer their geographic origin with surprising accuracy-often to within a few hundred kilometres.     

Bayesian Analysis of a Threshold Stochastic Volatility Model

This paper proposes a parsimonious threshold stochastic volatility (SV) model for financial asset returns. Instead of imposing a threshold value on the dynamics of the latent volatility process of the SV model, we assume that the innovation of the mean equation follows a threshold distribution in which the mean innovation switches between two regimes. In our model, the threshold is treated as an unknown parameter. We show that the proposed threshold SV model can not only capture the time‐varying volatility of returns, but can also accommodate the asymmetric shape of conditional distribution of the returns. Parameter estimation is carried out by using Markov chain Monte Carlo methods. For model selection and volatility forecast, an auxiliary particle filter technique is employed to approximate the filter and prediction distributions of the returns. Several experiments are conducted to assess the robustness of the proposed model and estimation methods. In the empirical study, we apply our threshold SV model to three return time series. The empirical analysis results show that the threshold parameter has a non‐zero value and the mean innovations belong to two separately distinct regimes. We also find that the model with an unknown threshold parameter value consistently outperforms the model with a known threshold parameter value. Copyright © 2016 John Wiley & Sons, Ltd.     

Two new species of feather mites (Acarina: Psoroptidia) from the blue-throated blue flycatcher,Cyornis rubeculoides (Passeriformes: Muscicapidae)

The paper describes two new species of feather mites collected from the blue-throated blue flycatcher Cyornis rubeculoides (Vigors) (Passeriformes: Muscicapidae) in India (Meghalaya): Trouessartia kharkhanensis Constantinescu et al. sp. nov. (Trouessartiidae) and Proterothrix cyornissimilis Constantinescu et al. sp. nov. (Proctophyllodidae: Pterodectinae). Both sexes of T. kharkhanensis differ from the closest species, T. rubecula Jablonska, 1968 by having setae si and c2 lanceolate and setae c3 and sRIII with acute apex. In males of the new species, the adanal apodemes have a hook-like retroverse apophysis and the internal margins of terminal lamellae have a shallow invagination at the level of setae h3. Both sexes of P. cyornissimilis differ from the closest species, P. cyornis Mironov and Tolstenkov, 2013, mainly by the ornamentation of the dorsal shields: it is absent on the prodorsal shield and poorly expressed on the hysteronothal shield. In males of the new species, the supranal concavity is triangular and the genital arch has a pair of small ovoid sclerites at its tips.

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