Long-chain branched/cyclic alkanes in recent sediment of Lake Fuxian and their environmental implications

Lake Fuxian is a large, deep, and oligotrophic freshwater lake. In recent sediment of this lake, a series of branched and cyclic alkanes, including branched alkanes with one or two quaternary carbon atoms （C2n compounds）, alkylcycloheptane, and alkylcyclohexane, were detected in high abundance. For each homolog of long-chain branched/ cyclic alkanes, molecules with only an odd or even carbon number were present in the sediment. The abundance vari- ation of each compound homolog corresponded to those of other compound homolog in the section, indicating the same origin of these compounds. The concentrations of long-chain branched/cyclic alkanes in the sediment profile exhibited variations similar to those of phytoplankton biomarkers, such as 3-methylJalkanes, short-chain odd carbon n-alkanes, hopene, polyunsaturated fatty acids, phytol, sterols, and long-chain alkyl diols, but slightly different from those of long-chain odd carbon n-alkanes, which are ubiquitous biomarkers for higher plants. Therefore, the Can compounds and long-chain cyclic alkanes in the lake sediment were most likely produced by algae and bacteria in the water, primarily, by the heterotrophic bacteria in the moderately oxygenated waters, which flourishing might be the results of specific water environments in Lake Fuxian.     

CORBA组件运行和开发环境研究

提出了一个符合通用请求代理体系结构（CORBA）规范的软件组件运行环境的设计，作为CORBA组件的运行时刻支持平台，它独立于软件组件、负责组件的装入、管理和调度等工作。在研究中，采用当前先进的软件组件“容器”思想，将所有的软件组件纳入同一进程中运行，在设计中，充分利用了对象请求代理（ORB）核心所具有的功能，并针对CORBA组件设计了组件开发环境、使软件开发工作具有一定的自动化程度、提高了组件开发的质量和效率。     

New high-strength Ti-Al-V-Mo alloy: from high-throughput composition design to mechanical properties

The high-throughput diffusion-multiple technique and thermodynamics databases were used to design new high-strength Ti alloys. The composition-microstructure-property relationships of the Ti64-xMo alloys were obtained. The phase fraction and composition of the α and β phases of the Ti64-xMo alloys were calculated using the Thermo-Calc software. After aging at 600℃, the Ti64-6Mo alloy precipitated ultrafine α phases. This phenomenon was explained on the basis of the pseudo-spinodal mechanism by calculating the Gibbs energy curves of the α and β phases of the Ti64-xMo alloys at 600℃. Bulk forged Ti64-6Mo alloy exhibited high strength and moderate plasticity after α/β-phase-field solution treatment plus aging. The tensile properties of the alloy were determined by the size and morphology of the primary and secondary α phases and by the β grain size.     

From in vivo to in silico biology and back

The massive acquisition of data in molecular and cellular biology has led to the renaissance of an old topic: simulations of biological systems. Simulations, increasingly paired with experiments, are being successfully and routinely used by computational biologists to understand and predict the quantitative behaviour of complex systems, and to drive new experiments. Nevertheless, many experimentalists still consider simulations an esoteric discipline only for initiates. Suspicion towards simulations should dissipate as the limitations and advantages of their application are better appreciated, opening the door to their permanent adoption in everyday research.     

Phosphoinositides in cell regulation and membrane dynamics

Inositol phospholipids have long been known to have an important regulatory role in cell physiology. The repertoire of cellular processes known to be directly or indirectly controlled by this class of lipids has now dramatically expanded. Through interactions mediated by their headgroups, which can be reversibly phosphorylated to generate seven species, phosphoinositides play a fundamental part in controlling membrane-cytosol interfaces. These lipids mediate acute responses, but also act as constitutive signals that help define organelle identity. Their functions, besides classical signal transduction at the cell surface, include regulation of membrane traffic, the cytoskeleton, nuclear events and the permeability and transport functions of membranes.     

Mutations in VPS33B, encoding a regulator of SNARE-dependent membrane fusion, cause arthrogryposis-renal dysfunction-cholestasis (ARC) syndrome

ARC syndrome (OMIM 208085) is an autosomal recessive multisystem disorder characterized by neurogenic arthrogryposis multiplex congenita, renal tubular dysfunction and neonatal cholestasis with bile duct hypoplasia and low gamma glutamyl transpeptidase (gGT) activity. Platelet dysfunction is common. Affected infants do not thrive and usually die in the first year of life. To elucidate the molecular basis of ARC, we mapped the disease to a 7-cM interval on 15q26.1 and then identified germline mutations in the gene VPS33B in 14 kindreds with ARC. VPS33B encodes a homolog of the class C yeast vacuolar protein sorting gene, Vps33, that contains a Sec1-like domain important in the regulation of vesicle-to-target SNARE complex formation and subsequent membrane fusion.     

Multiple flavonoid-binding sites within multidrug resistance protein MRP1

Recombinant nucleotide-binding domains (NBDs) from human multidrug resistance protein MRP1 were overexpressed in bacteria and purified to measure their direct interaction with high-affinity flavonoids, and to evaluate a potential correlation with inhibition of MRP1-mediated transport activity and reversion of cellular multidrug resistance. Among different classes of flavonoids, dehydrosilybin exhibited the highest affinity for both NBDs, the binding to N-terminal NBD1 being prevented by ATP. Dehydrosilybin increased vanadate-induced 8-N₃-[-³²P]ADP trapping, indicating stimulation of ATPase activity. In contrast, dehydrosilybin strongly inhibited leukotriene C₄ (LTC₄) transport by membrane vesicles from MRP1-transfected cells, independently of reduced glutathione, and chemosensitized cell growth to vincristine. Hydrophobic C-isoprenylation of dehydrosilybin increased the binding affinity for NBD1, but outsite the ATP site, lowered the increase in vanadate-induced 8-N₃-[-³²P]ADP trapping, weakened inhibition of LTC₄ transport which became glutathione dependent, and induced some cross-resistance. The overall results indicate multiple binding sites for dehydrosilybin and its derivatives, on both cytosolic and transmembrane domains of MRP1.Received 1 May 2003; received after revision 18 June 2003; accepted 24 June 2003     

Effects of ultraviolet radiation B （UV-B） on photosynthesis of natural phytoplankton assemblages in a marine bay in Southern China

Solar ultraviolet radiation B (UVB) is known to have inhibitive effects on phytoplankton photosynthesis. UVB light decreases rapidly with increasing depth in the water column and exerts different degrees of UVB inhibitive effects on phytoplankton photosynthesis. In this study, the objectives were to quantify effects of UVB on phytoplankton photosynthesis and quantum yield, and to examine UVB effects on phytoplankton photosynthesis when light varies. The insitu experiments were conducted in Da Ya Bay, which is a semienclosed area in the subtropical South China. The results showed a significant reduction of photosynthetic rates and quantum yield in the presence of UVB. Maximum photosynthetic rates (Pmax) and maximum quantum yield (Φmax) were 11%-22% and 17%-49% less under solar radiation with UVB than without UVB. A simplified model was developed to describe the UVB biologically effective fluence rate (E*inh) as an exponential decay function of depth. Light-shift experiments, in which water samples from the surface and at depth of 4 m were divided into several subsamples, and each subsamples were then incubated at different depths with and without UVB in the water column, showed that phytoplankton from the deeper water (4 m) had more inhibitive rates by UVB than that from the surface when exposed to the same light condition.