Gene polymorphism in Netherton and common atopic disease.

Atopic dermatitis (AD) and asthma are characterized by IgE-mediated atopic (allergic) responses to common proteins (allergens), many of which are proteinases. Loci influencing atopy have been localized to a number of chromosomal regions, including the chromosome 5q31 cytokine cluster. Netherton disease is a rare recessive skin disorder in which atopy is a universal accompaniment. The gene underlying Netherton disease (SPINK5) encodes a 15-domain serine proteinase inhibitor (LEKTI) which is expressed in epithelial and mucosal surfaces and in the thymus. We have identified six coding polymorphisms in SPINK5 (Table 1) and found that a Glu420-->Lys variant shows significant association with atopy and AD in two independent panels of families. Our results implicate a previously unrecognized pathway for the development of common allergic illnesses.     

Equilibrating metal-oxide cluster ensembles for oxidation reactions using oxygen in water.

Although many enzymes can readily and selectively use oxygen in water-the most familiar and attractive of all oxidants and solvents, respectively-the design of synthetic catalysts for selective water-based oxidation processes utilizing molecular oxygen remains a daunting task. Particularly problematic is the fact that oxidation of substrates by O2 involves radical chemistry, which is intrinsically non-selective and difficult to control. In addition, metallo-organic catalysts are inherently susceptible to degradation by oxygen-based radicals, while their transition-metal-ion active sites often react with water to give insoluble, and thus inactive, oxides or hydroxides. Furthermore, pH control is often required to avoid acid or base degradation of organic substrates or products. Unlike metallo-organic catalysts, polyoxometalate anions are oxidatively stable and are reversible oxidants for use with O2 (refs 8,9,10). Here we show how thermodynamically controlled self-assembly of an equilibrated ensemble of polyoxometalates, with the heteropolytungstate anion [AIVVW11O40]6- as its main component, imparts both stability in water and internal pH-management. Designed to operate at near-neutral pH, this system facilitates a two-step O2-based process for the selective delignification of wood (lignocellulose) fibres. By directly monitoring the central Al atom, we show that equilibration reactions typical of polyoxometalate anions keep the pH of the system near 7 during both process steps.     

Individual recognition in mice mediated by major urinary proteins.

The ability to recognize individuals is essential to many aspects of social behaviour, such as the maintenance of stable social groups, parent-offspring or mate recognition, inbreeding avoidance and the modulation of competitive relationships. Odours are a primary mediator of individuality signals among many mammals. One source of odour complexity in rodents, and possibly in humans, resides in the highly polymorphic major histocompatibility complex (MHC). The olfactory acuity of mice and rats allows them to distinguish between the urinary odours of congenic strains differing only in single genes within the MHC, although the chemical mediators or odorants are unknown. However, rodent urine also contains a class of proteins, termed major urinary proteins (MUPs), that bind and release small volatile pheromones. We have shown that the combinatorial diversity of expression of MUPs among wild mice might be as great as for MHC, and at protein concentrations a million times higher. Here we show in wild house mice (Mus domesticus) that urinary MUPs play an important role in the individual recognition mechanism.     

Genetic mapping with SNP markers in Drosophila.

Map-based positional cloning of Drosophila melanogaster genes is hampered by both the time-consuming, error-prone nature of traditional methods for genetic mapping and the difficulties in aligning the genetic and cytological maps with the genome sequence. The identification of sequence polymorphisms in the Drosophila genome will make it possible to map mutations directly to the genome sequence with high accuracy and resolution. Here we report the identification of 7,223 single-nucleotide polymorphisms (SNPs) and 1,392 insertions/deletions (InDels) in common laboratory strains of Drosophila. These sequence polymorphisms define a map of 787 autosomal marker loci with a resolution of 114 kb. We have established PCR product-length polymorphism (PLP) or restriction fragment-length polymorphism (RFLP) assays for 215 of these markers. We demonstrate the use of this map by delimiting two mutations to intervals of 169 kb and 307 kb, respectively. Using a local high-density SNP map, we also mapped a third mutation to a resolution of approximately 2 kb, sufficient to localize the mutation within a single gene. These methods should accelerate the rate of positional cloning in Drosophila.     

Deep levels,transport and THz emission properties of SiGe/Si quantum-well structures

In coal mines in such countries as China and Russia,most of the coal mine methane(CMM) generated during mining is emitted to the atmosphere without any effective usage,because the methane concentration of CMM is relatively low and not allowed to be used as fuel for safety reasons.Methane is one of the greenhouse gases.Therefore,if it becomes possible to concentrate CMM to an acceptable level for use as fuel,this will greatly contribute to reduction of greenhouse gas emissions.With the aim of gaining approva...     

Henderson‐Trending of Macroeconomic Variables and Forecasting Accuracy

Using a structural time‐series model, the forecasting accuracy of a wide range of macroeconomic variables is investigated. Specifically of importance is whether the Henderson moving‐average procedure distorts the underlying time‐series properties of the data for forecasting purposes. Given the weight of attention in the literature to the seasonal adjustment process used by various statistical agencies, this study hopes to address the dearth of literature on ‘trending’ procedures. Forecasts using both the trended and untrended series are generated. The forecasts are then made comparable by ‘detrending’ the trended forecasts, and comparing both series to the realised values. Forecasting accuracy is measured by a suite of common methods, and a test of significance of difference is applied to the respective root mean square errors. It is found that the Henderson procedure does not lead to deterioration in forecasting accuracy in Australian macroeconomic variables on most occasions, though the conclusions are very different between the one‐step‐ahead and multi‐step‐ahead forecasts. Copyright © 2011 John Wiley & Sons, Ltd.     

Roost sites used by Sandhill Crane staging along the Platte River, Nebraska

We assessed the influence of water depth, extent of unobstructed view, and human disturbance features on use of roost sites by Sandhill Cranes along the Platte River, Nebraska, during spring migratory stopover. Aerial photos taken near dawn were used to determine areas of flock use and habitat availability in four sample reaches, and measurements were made on the ground at flock roost areas. In general, depths of 1-13 cm were used by sandhill cranes in greater proportion than those available. Exposed sandbars and depths >20 cm were avoided, while depths of 14-19 cm were used in proportion to their availability. Sites 11-50 m from the nearest visual obstruction were used significantly greater than their availability, while sites 0-4 and >50 m from visual obstructions were avoided. Sandhill Cranes avoided sites near paved roads, gravel roads, single dwellings, and bridges when selecting roost sites; however, they did not appear to be disturbed by private roads, groups of residential buildings, gravel pits, railroads, or electrical transmission lines.     

Ecological comparison of sympatric populations of sand lizards ( Cophosaurus texanus and Callisaurus draconoides )

Sympatric populations of Cophosaurus texanus and Callisaurus draconoides were periodically sampled from March 1973 through April 1974 at Burro Creek, Mohave County, Arizona. Callisaurus were also sampled at Rock Valley, Nye County, Nevada. Sex ratios were skewed in favor of males in the adult Cophosaurus but were equal in both adult populations of Callisaurus. Both species became sexually mature as yearlings. Mean clutch sizes were 3.55 (±0.83) for Cophosaurus, and 4.25 (±1.08) and 5.07 (±1.33) for Callisaurus at Burro Creek and Rock Valley respectively. Evidence of multiple clutches was exhibited by both species. Egg weight/body weight ratios for both species and clutch weight/body weight ratios for Cophosaurus were notably smaller than previously reported. At Burro Creek both species were highly insectivorus, with orthopterans comprising the largest food group of each. Niche overlap for food was high at the ordinal level, but at the familial level it is apparent that Callisaurus probably fed in the more xeric areas of the riparian habitat. No differences were found in the temperature responses of these two lizards. However, minor temporal separations and substantial spatial partitioning were observed. Callisaurus preferred sandy open areas, while Cophosaurus preferred the presence of some rocks and boulders.     

Trapping methods for rangeland insects in burned and unburned sites: a comparison

Different insect trapping methods were compared weekly on recently burned and nearby unburned rangeland in the Great Basin of western Utah. Flight traps (or wing traps) collected the most specimens (total = 4,916 at burned site, 4,384 at unburned site) but represented the fewest species (no more than 11 spp./wk at either site); this method was not recommended because of difficulty in removing specimens from adhesive. Water traps amassed the next largest number of specimens (￣x ± SE/wk = 150.9 ± 75.3 at burned site, 158.0 ± 66.4 at unburned site) and the most species (￣x ± SE/wk = 21.6 ± 6.4 at burned site, 35. 1 ± 4.5 at unburned site). The weekly collections from pitfall traps between the sites were significantly different (P < .05) in number of specimens (￣x ± SE/wk = 8.1 ± 1.5 at burned site, 19.7 ± 4.8 at unburned site) and species (￣x ± SE/wk = 4.7 ± 0.6 at burned site, 9.5 ± 2.0 at unburned site). Malaise traps were the most convenient. Black Malaise traps collected more specimens (￣x ± SE/wk = 99.8 ± 19.4 at burned site, 90.6 ± 16.4 at unburned site) and species (￣x ± SE/wk = 22.9 ± 3.9 at burned site, 19.4 ± 6.5 at unburned site) than white malaise traps (specimens: ￣x ± SE/wk = 72.1 ± 22.4 at burned site, 87.1 ± 31.2 at unburned site; species: ￣x ± SE/ wk = 19.7 ± 6.6 at burned site, 16.4 ± 5.4 at unburned site), although this difference was not significant.