Elaboration of vitamin B12 byEscherichia coli

Résumé Les auteurs ont constaté l'absence de la vitamine B₁₂ dans le corps 1° deE. coli 113-3, 2° de son parent prototrophique et 3° dans la souche sauvage. Le titre de B₁₂ dans le milieu de culture s'est trouvé fortement augmenté par la méthionine, dans le cas de la souche sauvage uniquement. En ajoutant de la cyanocobalamine on a obtenu dans les trois cas une augmentation de désoxyribosides.

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This work was supported by Grants A-1800 and A-1231 from the U. S. Public Health Service and Grants-in-Aid from the Loomis Foundation, the American Cancer Society, and the Nat. Ass. for Mentel Health.     

文化整体:古代科学研究之新路

劳埃德和席文合著的《道与名：早期中国和希腊的科学和医学》(耶鲁大学出版社,2002年)一书,提出了“文化整体”的概念,用以对古代中国和古希腊的科学进行了新的比较研究。这个新的比较研究方法对于非比较性的研究也同样有用。文章以元初的《授时历》改历为主要事例,阐释这个新方法的具体应用。     

Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

The marine unicellular cyanobacterium Prochlorococcus is the smallest-known oxygen-evolving autotroph. It numerically dominates the phytoplankton in the tropical and subtropical oceans, and is responsible for a significant fraction of global photosynthesis. Here we compare the genomes of two Prochlorococcus strains that span the largest evolutionary distance within the Prochlorococcus lineage and that have different minimum, maximum and optimal light intensities for growth. The high-light-adapted ecotype has the smallest genome (1,657,990 base pairs, 1,716 genes) of any known oxygenic phototroph, whereas the genome of its low-light-adapted counterpart is significantly larger, at 2,410,873 base pairs (2,275 genes). The comparative architectures of these two strains reveal dynamic genomes that are constantly changing in response to myriad selection pressures. Although the two strains have 1,350 genes in common, a significant number are not shared, and these have been differentially retained from the common ancestor, or acquired through duplication or lateral transfer. Some of these genes have obvious roles in determining the relative fitness of the ecotypes in response to key environmental variables, and hence in regulating their distribution and abundance in the oceans.     

A general integrative model for scaling plant growth, carbon flux, and functional trait spectra

Linking functional traits to plant growth is critical for scaling attributes of organisms to the dynamics of ecosystems and for understanding how selection shapes integrated botanical phenotypes. However, a general mechanistic theory showing how traits specifically influence carbon and biomass flux within and across plants is needed. Building on foundational work on relative growth rate, recent work on functional trait spectra, and metabolic scaling theory, here we derive a generalized trait-based model of plant growth. In agreement with a wide variety of empirical data, our model uniquely predicts how key functional traits interact to regulate variation in relative growth rate, the allometric growth normalizations for both angiosperms and gymnosperms, and the quantitative form of several functional trait spectra relationships. The model also provides a general quantitative framework to incorporate additional leaf-level trait scaling relationships and hence to unite functional trait spectra with theories of relative growth rate, and metabolic scaling. We apply the model to calculate carbon use efficiency. This often ignored trait, which may influence variation in relative growth rate, appears to vary directionally across geographic gradients. Together, our results show how both quantitative plant traits and the geometry of vascular transport networks can be merged into a common scaling theory. Our model provides a framework for predicting not only how traits covary within an integrated allometric phenotype but also how trait variation mechanistically influences plant growth and carbon flux within and across diverse ecosystems.     

Antibodies: The generation game

Proteomics is hungry for well-validated antibodies. Nathan Blow looks at the options and sees how researchers are redefining the way to generate an antibody.     

The Role of Geometrical Construction in Theodosius’s <Emphasis Type="Italic">Spherics</Emphasis>

This paper is a contribution to our understanding of the constructive nature of Greek geometry. By studying the role of constructive processes in Theodoius’s Spherics, we uncover a difference in the function of constructions and problems in the deductive framework of Greek mathematics. In particular, we show that geometric problems originated in the practical issues involved in actually making diagrams, whereas constructions are abstractions of these processes that are used to introduce objects not given at the outset, so that their properties can be used in the argument. We conclude by discussing, more generally, ancient Greek interests in the practical methods of producing diagrams.     

Geobotany of the Niobrara chalk barrens in Colorado: a study of edaphic endemism

The chalk barrens of the Niobrara Formation in the Arkansas River valley of Colorado exhibit a high degree of plant endemism and rarity. We examined their geochemistry and structure as well as the reproductive ecology of their signature species Mirabilis rotundifolius to assess factors influencing endemism. While no single component consistently identified the barren soils, the natural locations that support Mirablilis can be identified using elemental profiles from a cluster analysis of soil extracts. Because seeds germinate and plants proliferate in transplant gardens with non-calcic soils, bedrock and soil chemistry do not appear to be determinant components of endemism. Mirabilis rotundifoilus utilizes diverse pollinators but is capable of autogamy when insects are excluded; seed predation by harvester ants may be a limiting factor for population spread outside the barrens habitat. Mirabilis rotundifolius is a disturbance-tolerant species, part of a barrens cohort that shares traits of suffrutescence, woody caudices, or multibranched rhizomes penetrating the chalk strata. Its presence may be enhanced when disturbance inhibits the presence of other species that compete for limited water resources. We conclude that endemism is dictated not by unusual soil chemistry requirements but rather by structural components of the barrens. In a water-limited environment, shallow soils and thin chalk strata coupled with a functionally adaptive growth habit allow M. rotundifolius to survive when other species are excluded by disturbance or the physiochemical aspects of the barrens.