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901.
Specific protein-protein interactions are essential for cellular functions. Experimentally determined three-dimensional structures
of protein-protein complexes offer the possibility to characterize binding interfaces in terms of size, shape and packing
density. Comparison with crystal-packing interfaces representing nonspecific protein-protein contacts gives insight into how
specific binding differs from nonspecific low-affinity binding. An overview is given on empirical structural rules for specific
protein-protein recognition derived from known complex structures. Although single parameters such as interface size, shape
or surface complementary show clear trends for different interface types, each parameter alone is insufficient to fully distinguish
between specific versus crystal-packing contacts. A combination of interface parameters is, however, well suited to characterize a specific interface.
This knowledge provides us with the essential ingredients that make up a specific protein recognition site. It is also of
great value for the prediction of protein binding sites and for the evaluation of predicted complex structures.
Received 1 October 2007; received after revision 9 November 2007; accepted 9 November 2007 相似文献
902.
Cohausz O Blenn C Malanga M Althaus FR 《Cellular and molecular life sciences : CMLS》2008,65(4):644-655
Poly(ADP-ribose) (PAR) has been identified as a DNA damage-inducible cell death signal upstream of apoptosis-inducing factor
(AIF). PAR causes the translocation of AIF from mitochondria to the nucleus and triggers cell death. In living cells, PAR
molecules are subject to dynamic changes pending on internal and external stress factors. Using RNA interference (RNAi), we
determined the roles of poly(ADP-ribose) polymerases-1 and -2 (PARP-1, PARP-2) and poly(ADP-ribose) glycohydrolase (PARG),
the key enzymes configuring PAR molecules, in cell death induced by an alkylating agent. We found that PARP-1, but not PARP-2
and PARG, contributed to alkylation-induced cell death. Likewise, AIF translocation was only affected by PARP-1. PARP-1 seems
to play a major role configuring PAR as a death signal involving AIF translocation regardless of the death pathway involved.
Received 7 November 2007; received after revision 19 December 2007; accepted 21 December 2007
O. Cohausz, C. Blenn: These two authors contributed equally to this work. 相似文献
903.
Oddi S Fezza F Pasquariello N De Simone C Rapino C Dainese E Finazzi-Agrò A Maccarrone M 《Cellular and molecular life sciences : CMLS》2008,65(5):840-850
Anandamide is a lipid messenger that carries out a wide variety of biological functions. It has been suggested that anandamide
accumulation involves binding to a saturable cellular component. To identify the structure(s) involved in this process, we
analyzed the intracellular distribution of both biotinylated and radiolabeled anandamide, providing direct evidence that lipid
droplets, also known as adiposomes, constitute a dynamic reservoir for the sequestration of anandamide. In addition, confocal
microscopy and biochemical studies revealed that the anandamide-hydrolase is also spatially associated with lipid droplets,
and that cells with a larger adiposome compartment have an enhanced catabolism of anandamide. Overall, these findings suggest
that adiposomes may have a critical role in accumulating anandamide, possibly by connecting plasma membrane to internal organelles
along the metabolic route of this endocannabinoid.
S. Oddi, F. Fezza: These authors contributed equally to the study. 相似文献
904.
Navarro S Aleu J Jiménez M Boix E Cuchillo CM Nogués MV 《Cellular and molecular life sciences : CMLS》2008,65(2):324-337
Human eosinophil cationic protein (ECP)/ ribonuclease 3 (RNase 3) is a protein secreted from the secondary granules of activated
eosinophils. Specific properties of ECP contribute to its cytotoxic activities associated with defense mechanisms. In this
work the ECP cytotoxic activity on eukaryotic cell lines is analyzed. The ECP effects begin with its binding and aggregation
to the cell surface, altering the cell membrane permeability and modifying the cell ionic equilibrium. No internalization
of the protein is observed. These signals induce cell-specific morphological and biochemical changes such as chromatin condensation,
reversion of membrane asymmetry, reactive oxygen species production and activation of caspase-3-like activity and, eventually,
cell death. However, the ribonuclease activity component of ECP is not involved in this process as no RNA degradation is observed.
In summary, the cytotoxic effect of ECP is attained through a mechanism different from that of other cytotoxic RNases and
may be related with the ECP accumulation associated with the inflammatory processes, in which eosinophils are present.
Received 26 October 2007; accepted 23 November 2007 相似文献
905.
Shin JM Vagin O Munson K Kidd M Modlin IM Sachs G 《Cellular and molecular life sciences : CMLS》2008,65(2):264-281
Inhibition of gastric acid secretion is the mainstay of the treatment of gastroesophageal reflux disease and peptic ulceration;
therapies to inhibit acid are among the best-selling drugs worldwide. Highly effective agents targeting the histamine H2 receptor
were first identified in the 1970s. These were followed by the development of irreversible inhibitors of the parietal cell
hydrogen-potassium ATPase (the proton pump inhibitors) that inhibit acid secretion much more effectively. Reviewed here are
the chemistry, biological targets and pharmacology of these drugs, with reference to their current and evolving clinical utilities.
Future directions in the development of acid inhibitory drugs include modifications of current agents and the emergence of
a novel class of agents, the acid pump antagonists.
Received 30 May 2007; received after revision 15 August 2007; accepted 13 September 2007 相似文献
906.
Dolezel D Zdechovanova L Sauman I Hodkova M 《Cellular and molecular life sciences : CMLS》2008,65(6):964-969
Current models state that insect peripheral oscillators are directly responsive to light, while mammalian peripheral clock
genes are coordinated by a master clock in the brain via intermediate factors, possibly hormonal. We show that the expression
levels of two circadian clock genes, period (per) and Par Domain Protein 1 (Pdp1) in the peripheral tissue of an insect model species, the linden bug Pyrrhocoris apterus, are inversely affected by contrasting photoperiods. The effect of photoperiod on per and Pdp1 mRNA levels was found to be mediated by the corpus allatum, an endocrine gland producing juvenile hormone. Our results
provide the first experimental evidence for the effect of an endocrine gland on circadian clock gene expression in insects.
Received 31 October 2007; received after revision 7 January 2008; accepted 9 January 2008
D. Dolezel, L. Zdechovanova: These authors contributed equally to this work. 相似文献
907.
Beside its role as a neurotransmitter in the central nervous system, serotonin appears to be a central physiologic mediator
of many gastrointestinal (GI) functions and a mediator of the brain-gut connection. By acting directly and via modulation
of the enteric nervous system, serotonin has numerous effects on the GI tract. The main gut disturbances in which serotonin
is involved are acute chemotherapy-induced nausea and vomiting, carcinoid syndrome and irritable bowel syndrome. Serotonin
also has mitogenic properties. Platelet-derived serotonin is involved in liver regeneration after partial hepatectomy. In
diseased liver, serotonin may play a crucial role in the progression of hepatic fibrosis and the pathogenesis of steatohepatitis.
Better understanding of the role of the serotonin receptor subtypes and serotonin mechanisms of action in the liver and gut
may open new therapeutic strategies in hepato-gastrointestinal diseases.
Received 15 August 2007; received after revision 1 November 2007; accepted 5 November 2007 相似文献
908.
Cajal bodies (CBs) and Gems are nuclear domains that contain factors responsible for spliceosomal small nuclear ribonucleoprotein
(snRNP) biogenesis. The marker protein for CBs is coilin. In addition to snRNPs, coilin and other factors, canonical CBs contain
the survivor of motor neuron protein (SMN). SMN can also localize to Gems. Considering the important role that coilin plays
in the formation and composition of CBs, we tested the splicing efficiency of several cell lines that vary in regards to coilin
level and modification using an artificial reporter substrate. We found that cells with both hypomethylated coilin and Gems
are more efficient at reporter splicing compared to cells in which SMN localizes to CBs. In contrast, coilin reduction, which
induces Gem formation, decreases cell proliferation and artificial reporter splicing. These findings demonstrate that coilin
modifications or levels impact artificial reporter splicing, possibly by influencing snRNP biogenesis.
Received 26 December 2007; received after revision 5 February 2008; accepted 7 February 2008 相似文献
909.
Many notions regarding the function, structure and regulation of cholera toxin expression have remained essentially unaltered
in the last 15 years. At the same time, recent findings have generated additional perspectives. For example, the cholera toxin
genes are now known to be carried by a non-lytic bacteriophage, a previously unsuspected condition. Understanding of how the
expression of cholera toxin genes is controlled by the bacterium at the molecular level has advanced significantly and relationships
with cell-density-associated (quorum-sensing) responses have recently been discovered. Regarding the cell intoxication process,
the mode of entry and intracellular transport of cholera toxin are becoming clearer. In the immunological field, the strong
oral immunogenicity of the non-toxic B subunit of cholera toxin (CTB) has been exploited in the development of a now widely
licensed oral cholera vaccine. Additionally, CTB has been shown to induce tolerance against co-administered (linked) foreign
antigens in some autoimmune and allergic diseases.
Received 25 October 2007; accepted 12 December 2007 相似文献
910.
Myosin V from head to tail 总被引:1,自引:1,他引:0
Trybus KM 《Cellular and molecular life sciences : CMLS》2008,65(9):1378-1389
Myosin V (myoV), a processive cargo transporter, has arguably been the most well-studied unconventional myosin of the past
decade. Considerable structural information is available for the motor domain, the IQ motifs with bound calmodulin or light
chains, and the cargo-binding globular tail, all of which have been crystallized. The repertoire of adapter proteins that
link myoV to a particular cargo is becoming better understood, enabling cellular transport processes to be dissected. MyoV
is processive, meaning that it takes many steps on actin filaments without dissociating. Its extended lever arm results in
long 36-nm steps, making it ideal for single molecule studies of processive movement. In addition, electron microscopy revealed
the structure of the inactive, folded conformation of myoV when it is not transporting cargo. This review provides a background
on myoV, and highlights recent discoveries that show why myoV will continue to be an active focus of investigation.
Received 31 October 2007; received after revision 4 December 2007; accepted 2 January 2008 相似文献