Copper-containing plastocyanin used for electron transport by an oceanic diatom

The supply of some essential metals to pelagic ecosystems is less than the demand, so many phytoplankton have slow rates of photosynthetic production and restricted growth. The types and amounts of metals required by phytoplankton depends on their evolutionary history and on their adaptations to metal availability, which varies widely among ocean habitats. Diatoms, for example, need considerably less iron (Fe) to grow than chlorophyll-b-containing taxa, and the oceanic species demand roughly one-tenth the amount of coastal strains. Like Fe, copper (Cu) is scarce in the open sea, but notably higher concentrations of it are required for the growth of oceanic than of coastal isolates. Here we report that the greater Cu requirement in an oceanic diatom, Thalassiosira oceanica, is entirely due to a single Cu-containing protein, plastocyanin, which--until now--was only known to exist in organisms with chlorophyll b and cyanobacteria. Algae containing chlorophyll c, including the closely related coastal species T. weissflogii, are thought to lack plastocyanin and contain a functionally equivalent Fe-containing homologue, cytochrome c6 (ref. 9). Copper deficiency in T. oceanica inhibits electron transport regardless of Fe status, implying a constitutive role for plastocyanin in the light reactions of photosynthesis in this species. The results suggest that selection pressure imposed by Fe limitation has resulted in the use of a Cu protein for photosynthesis in an oceanic diatom. This biochemical switch reduces the need for Fe and increases the requirement for Cu, which is relatively more abundant in the open sea.     

A 40,000 year-old human occupation site at Huon Peninsula, Papua New Guinea

The geographical position of the island of New Guinea suggests that it may have been an early staging post in the Pleistocene settlement of Australia from the Indonesia-Indochina region. Previous data have not supported this, as archaeological sites 35,000 to 40,000 years old occur in southern Australia, whereas the earliest previously known in Papua New Guinea is 26,000 years old. We now report evidence that the north coast of Papua New Guinea was occupied at least 40,000 years ago. Sahuland, which is the greater land area of Australia and New Guinea plus their connecting continental shelf exposed as land when Pleistocene sea levels were lower than now, was occupied by humans in several widely separated areas at that time. A distinctive 'waisted axe' culture appears to have existed in New Guinea and probably in Australia in the Late Pleistocene, but antecedents are not yet known from east and southeast Asia. There is evidence for hafting of these tools at a date which is earlier than known elsewhere in the world.     

Relaxation in polymer electrolytes on the nanosecond timescale

The relation between mechanical and electrical relaxation in polymer/lithium-salt complexes is a fascinating and still unresolved problem in condensed-matter physics, yet has an important bearing on the viability of such materials for use as electrolytes in lithium batteries. At room temperature, these materials are biphasic: they consist of both fluid amorphous regions and salt-enriched crystalline regions. Ionic conduction is known to occur predominantly in the amorphous fluid regions. Although the conduction mechanisms are not yet fully understood, it is widely accepted that lithium ions, coordinated with groups of ether oxygen atoms on single or perhaps double polymer chains, move through re-coordination with other oxygen-bearing groups. The formation and disruption of these coordination bonds must be accompanied by strong relaxation of the local chain structure. Here we probe the relaxation on a nanosecond timescale using quasielastic neutron scattering, and we show that at least two processes are involved: a slow process with a translational character and one or two fast processes with a rotational character. Whereas the former reflects the slowing-down of the translational relaxation commonly observed in polyethylene oxide and other polymer melts, the latter appears to be unique to the polymer electrolytes and has not (to our knowledge) been observed before. A clear picture emerges of the lithium cations forming crosslinks between chain segments and thereby profoundly altering the dynamics of the polymer network.     

Biological scaling: does the exception prove the rule?

Reich et al. report that the whole-plant respiration rate, R, in seedlings scales linearly with plant mass, M, so that R=C(R)M(theta) when theta approximately 1, in which c(R) is the scaling normalization and theta is the scaling exponent. They also state that because nitrogen concentration (N) is correlated with c(R), variation in N is a better predictor of R than M would be. Reich et al. and Hedin incorrectly claim that these "universal" findings question the central tenet of metabolic scaling theory, which they interpret as predicting theta = (3/4), irrespective of the size of the plant. Here we show that these conclusions misrepresent metabolic scaling theory and that their results are actually consistent with this theory.     

Mitochondrial aging is accelerated by anti-retroviral therapy through the clonal expansion of mtDNA mutations

There is emerging evidence that people with successfully treated HIV infection age prematurely, leading to progressive multi-organ disease, but the reasons for this are not known. Here we show that patients treated with commonly used nucleoside analog anti-retroviral drugs progressively accumulate somatic mitochondrial DNA (mtDNA) mutations, mirroring those seen much later in life caused by normal aging. Ultra-deep re-sequencing by synthesis, combined with single-cell analyses, suggests that the increase in somatic mutation is not caused by increased mutagenesis but might instead be caused by accelerated mtDNA turnover. This leads to the clonal expansion of preexisting age-related somatic mtDNA mutations and a biochemical defect that can affect up to 10% of cells. These observations add weight to the role of somatic mtDNA mutations in the aging process and raise the specter of progressive iatrogenic mitochondrial genetic disease emerging over the next decade.