The correspondence between James Hutton (1726–1797) and James Watt (1736–1819) with two letters from Hutton to George Clerk-Maxwell (1715–1784): Part I

In the collection of Watt's papers at Doldowlod, home of Lord Gibson-Watt, there are seven previously unpublished letters from James Hutton to James Watt, and four letters from Watt to Hutton, also unpublished. The letters were written between 1774 and 1795. Very little of Hutton's other correspondence survives, so these letters add significantly to our knowledge. The earliest letters, together with two letters to George Clerk-Maxwell (in the Scottish Record Office), describe geological tours that Hutton made through Wales, the Midlands, and the south-west of England in 1774. The correspondence after 1774, which will appear in a later edition of Annals of Science, reveals Watt's expertise in geology, and also discusses meteorology, varnish making, Symington's steam engines, the first experiments with steam navigation, pneumatic medicine, and other topics.     

Larger ectoparasites of the Idaho ground squirrel ( Spermophilus brunneus )

We sampled both subspecies of the Idaho ground squirrel ( Spermophilus brunneus ) to document the larger ectoparasites of this rare endemic. S. b. brunneus was host (+ = new host record, ? = new Idaho record) to 4 flea species ( Neopsylla inopina + , Oropsylla idahoensis + , O. tuberculata , and Thrassis pandorae +), 1 tick ( Ixodes sculptus +), and an eyeworm (Nematoda: Rhabditis orbitalis ? + , also 1st records from Seiuridae); S. b. endemicus was host to a louse species ( Neohaematopinus laeviusculus +), 5 flea taxa ( Rhadinopsylla sp. + , O. t. tuberculata, Thrassis f. francisi + , T. f. barnest + , and T. f. rockwoodi ), and a mite ( Androlaelaps fahrenholzi +). Spermophilus brunneus had fewer known ectoparasite species than other congeners. Although all of their parasites had many other hosts, S. b. endemicus and S. b. brunneus shared only a single parasite species in common, whereas all but one of their ectoparasites also occurred on the closely related Townsend's ground squirrel ( S. townsendii ). The proportion of parasitized individuals and the parasite loads per individual were significantly lower in S. b. brunneus , which lives in small, isolated populations, than in S. b. endemicus , which has larger, less fragmented populations, suggesting a relationship between host population structure, parasite loads, and parasite species diversity. All but one of the flea species have been linked to plague transmission.     

Functional characteristics of wilderness streams twenty years following wildfire

We compared functional attributes of streams draining catchments burned by wildfire 20 years previously to those of streams in unburned catchments. Long-term analyses of channel profiles indicated most channel change occurred within the first 10 years after fire with little subsequent change the following 10 years. Much of the standing dead timber had fallen, and its effect on stream morphology was directly related to stream size, with important ramifications for future years as decay progresses. The volume of wood in the active channel was 5X higher in a 3rdorder burn stream than in other burn or reference streams, but > 80% of this wood was still bridging the stream. Retention of leaves was strongly associated with channel morphology and location of debris dams. Sediment respiration was significantly greater (1.7X) in streams of burned catchments, resulting from greater amounts of loosely attached organic matter in the sediments of these streams. In concordance with respiration results, coefficients of exchange (k ex ) were almost 5X higher in burn streams than in reference streams, although estimates of transient storage were similar between stream types. We expect the input of large woody debris to increase in the next 10 years in fire-impacted streams as bridging trees collapse into the stream, thereby enhancing channel complexity and habitat heterogeneity, instream metabolism and retention, and consequently stream function. The results emphasize the importance of landscape history, such as large-scale wildfires, on present patterns and processes in stream ecosystems.     

Electrophoretic study of cutthroat trout populations in Utah

Thirty - nine Utah streams were sampled for cutthroat trout. Of these, 31 contain cutthroat or cutthroat / rainbow hybrid populations. By using starch gel electrophoresis, these populations were segregated into three groups. One group consisted predominately of fish from the Sevier River (of the Bonneville Basin) and Colorado drainages. A second was primarily populations from the Bear River Drainage (Bonneville Basin) as well as some scattered populations along the Wasatch Front (Bonneville Basin). The third consisted of Wasatch Front populations and populations that have hybridized with rainbow trout. Since different subspecies of cutthroat trout are native to the Colorado and Bonneville drainages, one would expect the populations from within the Bonneville Basin to be more similar to one another and less similar to the Colorado River populations. That this did not occur raises questions concerning the evolutionary relationships of the subspecies and the populations. It is clear that at least a northern (Bear River) and southern (Sevier River) form of the Bonneville cutthroat exists. The Wasatch Front may represent an intermediate zone where these two forms intergrade.         

Early development of the razorback sucker, Xyrauchen texanus (Abbott)

  Fertilized ova of razorback sucker, Xyrauchen texanus, were adhesive for 3 to 4 hours after fertilization. Cleavage was completed at 24 hours, gastrulation occurred at 34 hours, and blood circulation was established at 117 hours. Hatching occurred from 5.2 to 5.5 days after fertilization. Larvae were from 6.8 to 7.3 mm TL at hatching. Yolk was assimilated at 13 days (10 mm TL). All fins were formed and had ossified rays at 64 days (27 mm TL). The unique nuchal keel appeared about 200 days after fertilization.     

For whom the bell tolls? DING proteins in health and disease

DING proteins, identified mainly by their eponymous N-terminal sequences, are ubiquitous in living organisms. Amongst bacteria, they are common in pseudomonads, and have been characterised with respect to genetics and structure. They form part of a wider family of phosphate-binding proteins, with emerging roles in phosphate acquisition and pathogenicity. Many DING proteins have been isolated in eukaryotes, in which they have been associated with very diverse biological activities, often in the context of possible signalling roles. Disease states in which DING proteins have been implicated include rheumatoid arthritis, lithiasis, atherosclerosis, some tumours and tumour-associated cachexia, and bacterial and viral adherence. Complete genetic and structural characterisation of eukaryotic DING genes and proteins is still lacking, though the phosphate-binding site seems to be conserved. Whether as bacterial proteins related to bacterial pathogenicity, or as eukaryotic components of biochemical signalling systems, DING proteins require further study. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Developmental regulation of p70 S6 kinase by a G protein-coupled receptor dynamically modelized in primary cells

The mechanisms whereby G protein-coupled receptors (GPCR) activate signalling pathways involved in mRNA translation are ill-defined, in contrast to tyrosine kinase receptors (TKR). We compared a GPCR and a TKR, both endogenously expressed, for their ability to mediate phosphorylation of 70-kDa ribosomal S6 kinase p70S6K in primary rat Sertoli cells at two developmental stages. In proliferating cells stimulated with follicle-stimulating hormone (FSH), active p70S6K was phosphorylated on T389 and T421/S424, through cAMP-dependent kinase (PKA) and phosphatidyl-inositide-3 kinase (PI3K) antagonizing actions. In FSH-stimulated differentiating cells, active p70S6K was phosphorylated solely on T389, PKA and PI3K independently enhancing its activity. At both developmental stages, insulin-induced p70S6K regulation was consistent with reported data. Therefore, TKR and GPCR trigger distinct p70S6K active conformations. p70S6K developmental regulation was formalized in a dynamic mathematical model fitting the data, which led to experimentally inaccessible predictions on p70S6K phosphorylation rate.     

Regional assessment of wadable streams in Idaho, USA

There has been a resurgence in applying bioassessment techniques for evaluating and monitoring the biological integrity of stream ecosystms. In all cases biological metrics have been refined to account for regional variation in aquatic habitats and fauna. This study evaluated environmental and macroinvertebrate properties for wadable streams in 3 major ecoregions of Idaho: Northern Basin and Range, Snake River Plain, and Northern Rocky Mountain. These 3 ecoregions constitute > 80% of the land area in Idaho. Reference streams were delineated from test streams in each ecoregion using standard habitat assessment protocols. (Plafkin et al. 1989). Multiple discriminant analysis effectively determined habitat (quantified measures) and macroinvertebrate differences between reference and test streams within ecoregions, although the results suggested that quantifiable habitat measures (e.g., water chemistry and nutrients) and biotic measures based on taxonomic groups (e.g., % Elmidae) improved the discriminatory power of evaluation procedures. Our results support the contention of a multi-metric approach for assessing differences among streams within an ecoregion. Lastly, individual metrics differed in their importance for evaluating stream condition among ecoregions, further emphasizing the importance of regionally stratifying metric selection or scoring procedures.     

Testing for the usefulness of forecasts

Ashley (Journal of Forecasting 1983; 2 (3): 211–223) proposes a criterion (known as Ashley's index) to judge whether the external macroeconomic variables are well forecast to serve as explanatory variables in forecasting models, which is crucial for policy makers. In this article, we try to extend Ashley's work by providing three testing procedures, including a ratio‐based test, a difference‐based test, and the Bayesian approach. The Bayesian approach has the advantage of allowing the flexibility of adapting all possible information content within a decision‐making environment such as the change of variable's definition due to the evolving system of national accounts. We demonstrate the proposed methods by applying six macroeconomic forecasts in the Survey of Professional Forecasters. Researchers or practitioners can thus formally test whether the external information is helpful. Copyright © 2010 John Wiley & Sons, Ltd.