Finding finer functions for partially characterized proteins by protein-protein interaction networks

Based on high-throughput data, numerous algorithms have been designed to find functions of novel proteins. However, the effectiveness of such algorithms is currently limited by some fundamental factors, including (1) the low a-priori probability of novel proteins participating in a detailed function; (2) the huge false data present in high-throughput datasets; (3) the incomplete data coverage of functional classes; (4) the abundant but heterogeneous negative samples for training the algorithms; and (5) the lack of detailed functional knowledge for training algorithms. Here, for partially characterized proteins, we suggest an approach to finding their finer functions based on protein interaction sub-networks or gene expression patterns, defined in function-specific subspaces. The proposed approach can lessen the above-mentioned problems by properly defining the prediction range and functionally filtering the noisy data, and thus can efficiently find proteins’ novel functions. For thousands of yeast and human proteins partially characterized, it is able to reliably find their finer functions (e.g., the translational functions) with more than 90% precision. The predicted finer functions are highly valuable both for guiding the follow-up wet-lab validation and for providing the necessary data for training algorithms to learn other proteins.     

共轭斜量法在某些特征向量上收敛速度的估计

设 Ａ是对称正定矩阵，λ_1是 Ａ 的最大或最小特征值，χ_1是对应的特征向量．｛zk｝是用共轭斜量法求解方程组 Αχ＝ｂ时的近似解序列，ｅi＝Ａ～(_1)b-zi,本文给出了|x_1～Tei|较合理的上界估计式。从而为分析预处理共轭斜量法提供了进一步的理论基础。     

合金铸铁激光处理的探讨——Ⅱ.激光辐照工艺参数的控制

用热传导方程控制激光辐照温度,建立了一种新回归方程以控制激光辐照硬化深度,选用卡尔丹公式列热传导方程及同归方程联立求解,可得到同时满足一定的硬化深度及表面最高温度双重要求的工艺参数,此种方法可作为激光硬化处理工艺参数的控制或预报,对本合金铸铁的激光硬化处理,其表面温度的下限应大于其熔点温度,即以表面产生微熔的快速冷凝处理为宜,并以选取低功率慢扫描为最佳。     

CGPSS-F仿真系统数据的采集与分析

本文详细地叙述了“医院门诊部为门诊病人服务的CGPSS-F仿真系统”数据采集与分析的方法.利用CGPSS-F仿真系统的驻留在队列中的实体数和资源处于繁忙状态的单元数,合理调整实体在系统的时间.根据资源容量的利用,实体排队的长度和实体在系统的时间,确定实用的系统参数.     

高分辨率谱估计算法MUSIC和Minimum-Norm及性能比较

本文从理论上详细叙述了高分辨率谱估计技术MUSIC和Minimum-Norm算法的机理,给出并比较了它们的空域谱平坦度、3dB谱宽度和谱峰值随信噪比的变化情况.文章对工程设计人员加深理解、选择算法具有一定的参考意义.     

一种新的基于Kohonen网络的图像矢量量化

矢量量化是一种重要的数据压缩方法.本文利用Kohonen自组织映射神经网络进行矢量量化,首次较为详细地讨论了具体实现的步骤与细节,并在此基础上为改善边缘质量,提出一种基于Laplas算子检测边缘弓引导神经网络训练的方法,并通过实验证明其效果是明显的.     

并行算法软件库PASL

本文介绍了并行算法软件库ＰＡＳＬ。ＰＡＳＬ库运行在具有共享存储的多处理机上，它可以用于科学工程计算和仿真。     

H—列闭空间与H—序列闭空间

本文引进了θ-聚点,II-列闭空间与II-序列闭空间的概念,并对II-可数闭空间、II-列闭空间、II-序列闭空间建立了一些关系.     

权重分析系统

本文利用加权模糊区间统计方法,对决策指标权重进行了讨论,并引入关联度的概念讨论了各专家的偏离度及一致性。