Occurrence of anisakid larvae (Nematoda: Ascardidia) in fishes from Alaska and Idaho

All 25 sablefish ( Anoplopoma fimbria ) examined from two bays near Sitka, Alaska, were infected with anisakid larvae. There were 1 to 11 larvae per infected fish, with worms encysted in the musculature of the body wall of 5 fish and in the liver of 4 fish. For the other hosts the viscera was the site of infection. Chinook salmon ( Onchorhynchus tshawytscha ) from Barrow, Alaska, and Obsidian, Idaho, were also infected with anisakid larvae. These data extend the known northern distribution of the anisakids along the Pacific Coast for sablefish and chinook salmon. The pathogenesis of the migratory pathway of anisakid larvae is described, and comments on human health implications are presented.     

Temporal organization patterns of epigean beetle communities (Coleoptera: Carabidae,Tenebrionidae) in different successional stages of eastern Mediterranean maquis

This two-year study explores the community structure and temporal dynamics of carabid and tenebrionid beetles in five eastern Mediterranean juniper maquis formations in relation to successional stage. Based on vegetation cover, density and soil pH, the successional stage in two of the sites (Crete, Cyprus) was an earlier state compared with the other three (Attiki, Naxos, Samos), as a result of intense goat grazing. Diversity indices and abundance distributions were compared using morphoecological surrogates of the taxa. Temporal dynamics were regulated more by cumulative species richness than by sharp phenological patterns. The higher values of niche pre-emption parameter and species turnover imply better adaptation of endemic tenebrionids to the rapid change of environmental conditions, compared with carabids. Significantly lower abundance and biomass, and higher evenness and temporal turnover for both families in Crete and Cyprus are ascribed to the reversed course of succession caused by overgrazing.     

Decapod Crustacea from the International Indian Ocean Expedition: The species of Funchalia (Penaeidae) and their post-larvae

Summary

Information is sparse on the ecology of the larval and juvenile stages of the lobster (Homarus gammarus (L.)). A knowledge of the distribution and particularly the abundance of this species is vital for the development of stock-recruitment theory. Attempts were therefore made to determine the distribution of juvenile lobsters in the field by Scuba diving and the fishing of small mesh traps.

As these initial attempts were of very limited success, lobsters were reared in the laboratory to study their substrate preferences and behaviour. Juvenile lobsters (～8 mm carapace length) selected coarse substrates which offered suitable crevices, or burrowed extensively in fine, cohesive mud. The rock crevice habitat is widely used by adult lobsters, but the construction of complex mud burrows has not previously been described for this genus. The burrowing behaviour of juvenile lobsters and the structure of the burrows are discussed. Juvenile lobsters appear to have wide habitat tolerances enabling them to inhabit a variety of substrate types. The estimation of juvenile lobster abundance is likely to be extremely difficult.     

Relating abundance of purpleback flying squid Sthenoteuthis oualaniensis (Cephalopoda: Ommastrephidae) to environmental parameters using GIS and GAM in south-eastern Arabian Sea

The distribution pattern of purpleback flying squid and the relationship between its abundance and environmental variables in the south-eastern Arabian Sea were analysed using a geographical information system (GIS) and a generalised additive model (GAM). Highest abundances were observed during December and January within 10 and 13°N and 71 and 72°E around the Lakshadweep Islands. The mean abundance in the area was 4.21 tonnes/km² and the maximum sustainable yield (MSY) was estimated as 0.63 million tonnes. GAM indicated that very high squid abundance was associated with low values of dissolved oxygen (6.01–6.27 mg/L), sea surface temperature (28.03–28.62°C), pH (7.75–8.56), salinity (30.42–34.48 psu), chlorophyll-a (0.4–0.6 mg/m³), zooplankton biomass (0.23–0.64 mL/m³), and shallow 20°C isotherm (101.2–134.7 m) and mixed layer depth (17.8–29.8 m). As a carnivore from paralarval stages, S. oualaniensis depends on secondary and tertiary production to sustain its population for which primary production is used up. In the tropical Arabian Sea where temperature differences are not so pronounced, S. oualaniensis distribution was found to be related to a low but very narrow sea surface temperature (SST) band. There is sufficient fishable biomass in the area to possibly launch a new targeted oceanic squid fishery from the western seaboard of India.     

Vegetation responses to 35 and 55 years of native ungulate grazing in shrubsteppe communities

Ungulate populations are managed in shrubsteppe ecosystems around the world, but relatively few long-term datasets are available that test the impacts of these grazers on shrubsteppe structure and function. This study evaluated 8 exclosures in 4 shrubsteppe communities to determine the effects of deer and elk over 35 or 55 years on (1) plant biomass and species composition, (2) soil nitrogen (N) mineralization and net nitrification rates, Olsen extractable phosphorus (P), and C:N ratios, and (3) arthropod diversity and abundance. The site with deer, the highest ungulate densities, and coldest climate (Sinlahekin Wildlife Area, WA) had greater vegetative biomass and cover inside the exclosures than outside. The sites with elk, moderate ungulate densities, and intermediate climatic conditions (Oak Creek and Wenas Wildlife Areas, WA) had no effects of exclosures on vegetative biomass or cover. The site with elk, the lowest ungulate densities, and driest climatic conditions (L.T. Murray Wildlife Area, WA) had greater shrub cover outside of the exclosures. Ungulates significantly increased net N mineralization and nitrification rates, providing a potential explanation for compensatory growth by grazed plants. Our data suggest that arthropod herbivory does not substitute for ungulate herbivory. To the contrary, arthropod diversity reflected ungulate-induced changes in plant biomass. In addition to effects on standing biomass, ungulates were associated with increased exotic plant species richness at all 4 sites. Our results suggest that there may be a balance between indirect positive and direct negative effects of herbivory on plants that varies with ungulate densities and site characteristics, and that arthropod herbivory does not functionally replace ungulate herbivory.     

Population dynamics and reproduction of the hermit crab Calcinus gaimardii (Anomura: Diogenidae) at Inhaca Island,southern Mozambique

The population dynamics and reproduction of Calcinus gaimardii were studied at Inhaca Island, southern Mozambique. Crabs were sampled monthly from January to December 2003 in order to assess abundance, size distribution, sex ratio, reproduction and juvenile recruitment. Calcinus gaimardii is sexually dimorphic in relation to size, with males reaching larger size than females. Sex ratios were female‐biased during most months of the study period. Females were more abundant in the intermediate size classes while males outnumbered females in the largest ones. Reproduction took place year‐round with peaks of breeding activity between August and October. Likewise, juvenile recruitment was continuous for both sexes with high intensity in winter (May and June). Egg number increased with female size.     

Experimental manipulations of precipitation seasonality: effects on oak ( Quercus ) seedling demography and physiology

Predicted changes in regional precipitation patterns and soil moisture caused by anthropogenic trace gas emissions may affect the distribution and abundance of woody plants in arid and semiarid regions. To test the response of woody plants to potential changes in precipitation regimes, we manipulated summer and winter precipitation on plots that contained seedlings of Quercus emoryi Torr. (Emory oak), the dominant tree in oak savannas of the southwestern United States. Throughout the growing season, we monitored seedling survival and physiology (predawn leaf water potential, midday instantaneous gas exchange, and leaf carbon isotope discrimination). Seedling survival and physiological performance differed little between treatments, which embodied 50% changes to quantities of summer and winter precipitation, and encompassed a continuum of precipitation from 359 mm · year -1 to 846 mm · year -1 . However, survival and physiological performance of seedlings were negatively impacted by seasonal environmental conditions common to all treatments, especially during the annual pre-'monsoon' drought. Seedling predawn leaf water potentials, net CO 2 assimilation, and stomatal conductance indicate that growing conditions for Q. emoryi seedlings at this site are generally restricted to periods with adequate soil moisture (i.e., April and August). Results contrast with an assumption implicit to the ""two-layer"" soil water resource partitioning hypothesis that woody plants in all life history stages are more dependent upon winter than summer precipitation. In fact, summer precipitation appears more important than winter precipitation for Q. emoryi seedling recruitment and growth.     

Status and conservation of salmonids in relation to hydrologic integrity in the Greater Yellowstone Ecosystem

Native salmonid status was evaluated with an index quantifying distribution and abundance of cutthroat trout ( Oncorhynchus clarki ) and grayling ( Thymallus arcticus ) in 41 watersheds comprising the Greater Yellowstone Ecosystem. We assessed hydrologic integrity with a percentile-based index measuring cumulative effects of reservoirs, surface water withdrawals, and consumptive water use. Status of native salmonids was poor in 70% of the watersheds; exceptions occurred in a north-south core extending from the Upper Yellowstone southward through the national parks to Bear Lake. Hydrologic integrity was highest in headwater areas and lowest in lower-elevation watersheds. Status of native and nonnative salmonid populations currently existing in the ecosystem was positively correlated with hydrologic integrity ( r = 0.58), indicating that the hydrologic index performed well on a watershed scale in quantifying suitability of stream environments for salmonids. However, native trout status and hydrologic integrity were similarly correlated ( r = 0.63) only when watersheds receiving the lowest possible native salmonid index score were removed from analysis because these watersheds were uniformly distributed across hydrologic integrity. We infer that nonphysical factors such as interactions with introduced fish species have played an important role in the disappearance of native salmonids. The highest priority for conservation is preservation of core watersheds, where both hydrologic integrity and native trout status are high. Restoration opportunities exist in the Teton, Idaho Falls, Willow Creek, Central Bear, and Bear Lake watersheds, where viable cutthroat trout populations remain but are threatened by habitat degradation.     

Humpback chub ( Gila cypha ) in the Yampa and Green rivers, Dinosaur National Monument, with observations on roundtail chub ( G. robusta ) and other sympatric fishes

We evaluated distribution, habitat use, spawning, and species associations of the endangered humpback chub ( Gila cypha ) in the Yampa and Green rivers, Dinosaur National Monument, from 1986 to 1989. Adult and juvenile humpback chub were captured in high-gradient reaches of Yampa and Whirlpool canyons where they were rare ( n = 133, G. robusta ) were widely distributed in eddies, pools, runs, and riffles. Humpback chub ( n = 39) and roundtail chub ( n = 242) in reproductive condition were sympatric in eddy habitats during the 5-6 week period following highest spring runoff. River temperatures at this time averaged about 20 C. Nonnative channel catfish ( Ictalurus punctatus ) were abundant in eddies yielding humpback and roundtail chubs, suggesting a potential for negative interactions between the native and introduced fishes.     

Temperature and salinity relationships of the Nevadan relict dace

Pyramid Lake fish populations were sampled with nets on a monthly basis from November 1975 through December 1977. Fish species were taken in the following order of numerical relative abundance: tui chub ( Gila bicolor ), Tahoe sucker ( Catostomus tahoensis ), Lahontan cutthroat trout ( Salmo clarki henshawi ) including cutthroat-rainbow hybrids, cui-ui ( Chasmistes cujus ), and Sacramento perch ( Archoplites interruptus ). Relative abundance estimates are discussed with respect to seasonal availability, spatial distribution of the fish, sampling bias of the fishing methods, and biomass of the fish. Recent temporal trends in the population structure of the lake are presented.     

Species composition and relative abundance of adult fish in Pyramid Lake, Nevada

Pyramid Lake fish populations were sampled with nets on a monthly basis from November 1975 through December 1977. Fish species were taken in the following order of numerical relative abundance: tui chub ( Gila bicolor ), Tahoe sucker ( Catostomus tahoensis ), Lahontan cutthroat trout ( Salmo clarki henshawi ) including cutthroat-rainbow hybrids, cui-ui ( Chasmistes cujus ), and Sacramento perch ( Archoplites interruptus ). Relative abundance estimates are discussed with respect to seasonal availability, spatial distribution of the fish, sampling bias of the fishing methods, and biomass of the fish. Recent temporal trends in the population structure of the lake are presented.     

Occurrence of native Colorado River cutthroat trout ( Oncorhynchus clarki pleuriticus ) in the Escalante River drainage, Utah

Field surveys were conducted during 1997 and 1998 documenting the distribution and abundance of Colorado River cutthroat trout ( Oncorhynchus clarki pleuriticus ) in Escalante River tributaries. This documented occurrence of native trout in the Escalante River drainage of southern Utah represents an expansion of the known historic range of this subspecies as reported before the 1990s. We found 5 populations of native trout ranging in biomass from 3.0 to 104.2 kg ha -1 and occupying 13.2 km of stream of 130 km of estimated historic habitat. Current distribution and abundance of Colorado River cutthroat trout were compared to early introductions of nonnative trout stocked for sport fishing purposes. Native cutthroat trout have been displaced by nonnative cutthroat trout ( O. c. bouveri ), rainbow trout ( O. mykiss ), brook trout ( Salvelinus fontinalis ), and brown trout ( Salmo trutta ) except where they were isolated by physical or biological barriers. Displacement may have been more extensive except for the remoteness of the drainage and relatively recent introductions of nonnative trout. These conditions limited the overall amount of the drainage stocked, numbers of nonnative trout stocked, and time over which stocking occurred. Discoveries of native trout populations within the Escalante River drainage have allowed expanded conservation of this subspecies by adding new populations to what was known to exist and by increasing the known natural range of this fish.     

Abundance and diversity of decapod crustaceans in the deep-Catalan Sea (Western Mediterranean)

The deep-slope decapod fauna of the Catalan Sea was extensively sampled with an OTSB-14 bottom trawl. A total of 67 bottom tows were taken from 1985 to 1989 at bottom depths ranging from 552 to 2261 m. Species in which abundance decreased with depth were Plesionika acanthonotus, Polycheles typhlops, Calocaris macandreae and Geryon longipes. Highest densities of Acanthephyra eximia, Stereomastis sculpta, and Nematocarcinus exilis were attained at the greatest depths studied. Total abundance, biomass and species richness for decapod crustaceans as a whole decreased with depth. Maximum decapod biomass and diversity occurred on the upper-middle slope on soft bottoms in the Catalan Sea and in all regions for which data were available. In the Catalan Sea, an oligotrophic area, the abundance of decapods as a group seemed to be higher than in north-Atlantic eutrophic regions. In these latter areas, other deep-sea benthic invertebrate groups, particularly ophiuroids, predominate.     

Seasonal cycle of zooplankton abundance and biomass in Hamsilos Bay,Sinop, Southern Black Sea,Turkey

In this investigation, zooplankton was studied between July 2015 and June 2016 in Hamsilos Bay to examine spatial and temporal variations in abundance, biomass and taxonomic composition. The recorded mean zooplankton abundance and biomass were 3770.35 ind. m^?3 and 25.06 mg m^?3 in the inner station, 3928.11 ind. m^?3 and 28.19 mg m^?3 in the middle station and 3948.22 ind. m^?3 and 28.74 mg m^?3 in the outer station, respectively. The high abundance and biomass values observed in September 2015 were attributed to Oithona davisae (4575 ind. m^?3 at the inner station) and Penilia avirostris (33.4 mg m^?3 at the outer station), respectively. Copepoda was the most abundant during the entire period of the survey. In terms of abundance and biomass, Copepoda was followed by meroplankton and Cladocera. Most species within the zooplankton community exhibited evident seasonality throughout the year in Hamsilos Bay. This was particularly apparent for O. davisae, Centropages ponticus, Cladocera and meroplankton, which were abundant in summer–autumn, and for Pseudocalanus elongatus, which was more abundant during winter and spring. It has been determined that O. davisae, which is a non-indigenous cyclopoid copepod species of the Black Sea, has successfully inhabited southern Black Sea and has established a permanent population in this area.     

Age-related body weight,fecundity and population change in a south Dorset sika population (Cervus nippon); 1985–1993

Density-related changes in performance have been documented for a number of different ungulate species, with recorded decline in body weight, fecundity and both juvenile and adult survival as population densities increase. While density-dependent responses of this kind have been explored in some detail in red, roe and fallow deer, little published information is available on demographic responses to density in European populations of sika deer (Cervus nippon). This paper offers an analysis of the dynamics of two populations of sika from the south of England from 1985–1993. Data on age-related body weights for males and females and pregnancy rates of females are taken from analysis of cull records of 321 males and 534 females culled during that 8-year period. We describe trends in body mass of adult and juvenile sika of both sexes, and consider changes in pregnancy rates of both mature and yearling females in relation to changes in relative abundance. Despite steadily increasing population density between 1985 and 1991/1992, no consistent decline was recorded in body weight or condition (as measured by % cover of kidney fat) for calves or yearlings of either sex, or for mature females. A decline in recorded body weight of adult males was not significantly correlated to ranked relative abundance. Fecundity was high (with > 90% of mature females sampled found pregnant). Most mature females found pregnant were also lactating. The proportion of animals that conceived as yearlings (72%) was lower than that recorded for more mature hinds; however there is some indication that the difference recorded may simply reflect the fact that yearlings may conceive later in the season than older animals. No significant differences were apparent in the proportion of either adult or yearling females found pregnant in different years.     

Present effects of past wildfires on the diets of stream fish

We investigated present indirect effects from a decade-old burn on the diets of stream fish. Based on soil instability and burn patterns from a 12–14-year-old wildfire complex, we separated 9 streams into 3 conditions: unburned, burned, and burned/scoured (i.e., experiencing a massive scour event 1 year post-burn). In the streams, we measured light levels and water temperatures, and we estimated fish density and biomass. We removed the digestive tracts from 9–15 rainbow trout ( Oncorhynchus mykiss ) from each stream and used a gravimetric procedure to analyze gut contents. Canopy cover development may dictate the composition of dietary items. Greater amounts of aquatic invertebrates and inorganic material were found in trout from streams with reduced overhead canopy. Further, these streams had lower amounts of terrestrial invertebrates and organic materials in the diets of fish. Although trout abundance was not different among the stream treatments, fire-induced, indirect effects on fish diets were still evident more than a decade after the burn. This suggests that recovery rates for trout assemblages may take longer than predicted and may depend on riparian recovery.     

Vegetation complexity and bat‐plant dispersal in Calakmul,Mexico

Fruit production of chiropterochorous plants was studied to test the hypotheses that more complex habitats will harbour: (1) greater plant diversity, (2) higher biomass and density of bat‐dispersed plants, and (3) elevated frugivorous bat abundance. We defined habitat complexity as vegetation structural complexity – the degree of structural arrangement of vegetation. As forested environments are more complex than modified environments, they should harbour more bat‐dispersed species. From 2002 to 2003 in southern Mexico, we observed two fruiting peaks of 56 plant species (20 of which were bat‐dispersed) in tropical subhumid forest, tropical semi‐deciduous forest and modified open areas. Fruit density was greater in the canopy than in the understorey. Phenology alternated across seasons and habitats. Habitat complexity demonstrated no association with bat abundance, fruit mass or fruit density. A positive relationship between fruit mass and frugivorous bat abundance suggests that fruit mass probably influences frugivorous bat movement across time and space.     

Present effects of past wildfires on leaf litter breakdown in stream ecosystems

We investigated the present effects from a 10-year-old wildfire on leaf litter breakdown rates in 3 headwater streams in central Idaho. These systems experienced a massive debris flow one year after the fire. Based on soil instability and burn patterns, we identified 3 stream conditions: unburned, burned only, and burned/scoured. We placed leaf bags containing willow leaves ( Salix sp.) in each stream type and removed bags at various time intervals until all bags were collected 100 days after their introduction. Leaf material was dried and weighed, and decay rate coefficients were calculated. Macroinvertebrates colonizing the bags were enumerated and identified, and selected taxa were placed into trophic groups. We found that the unburned stream had the fastest leaf litter breakdown rate, the lowest level of incident light reaching the stream, and the largest amount of benthic organic matter. The burned/scoured stream was nearly opposite in all respects. Numbers of 2 detritivore invertebrate taxa, Serratella tibialis and Zapada oregonensis, were highest in the unburned stream but lowest in the burned/scoured stream. A third taxon, Baetis sp., showed the opposite relationship. Presence of predatory invertebrates did not affect detritivore abundance or leaf decay rate in the bags. Our research suggests that recovery response variables of some stream systems may not have returned to prefire levels even a decade after the initial wildfire. In this study, the recovery of our streams appears to be connected to the return of the riparian zone, though fire-induced debris flows may slow or alter final recovery of the stream system.     

Vertical distribution of liverwort communities and their relationship with environmental factors in a karst sinkhole in south-western China

ABSTRACT

Understanding the relationships between the vertical distribution of liverwort communities and associated environmental factors is vital for biodiversity conservation in karst sinkholes. The abundance index, α and β diversity indices were used to analyse the characteristics of liverwort communities in the Monkey-Ear Sinkhole (280 m deep, entrance diameter 300 m, width 280 m). A Generalised Linear Model was used to study the vertical distribution of liverwort communities, and the relationships between their vertical distribution and environmental factors were analysed with Canonical Correspondence Analysis. Forty-two liverwort taxa from 22 genera in 19 families were identified in the sinkhole. The liverwort assemblages were dominated by the families Plagiochilaceae and Lejeuneaceae. The α and β diversity appeared to fluctuate randomly among the four depths sampled. The highest degree of environmental heterogeneity was found at the lower-middle section of the sinkhole; liverwort community diversity at the base was much higher than that found at the upper, middle or lower-middle sections. The environment at the base of the sinkhole was more complex than at the other three depths, providing a range of habitats that facilitated the coexistence of multiple liverwort communities. The abundance of species, genera and families in liverwort communities followed the sequence: base > upper section > middle section > lower – middle section. There were significant differences in liverwort communities at the four depths. In the sinkhole, liverwort communities fell into three distribution groups: wide, moderate or narrow distribution along the vertical direction. The communities with a broad distribution, found from the upper section to the base, were affected by a combination of light, humidity and temperature, and were classified as mixed factor dependent; those with a moderate distribution found mostly in the mid and lower-middle sections were primarily dependent on temperature and humidity, and were classified as temperature and humidity dependent; and those with a narrow distribution found at the base of the sinkhole were mainly influenced by humidity, and were classified as humidity dependent.     

Effect of tropical monsoon on fishery abundance of Indian squid (Uroteuthis (Photololigo) duvaucelii)

Indian squid, Uroteuthis (Photololigo) duvaucelii (Loliginidae) constitute an important component of the inshore cephalopod fisheries along the eastern Arabian Sea. Local environmental variation plays an important role in species–environment interactions in neritic squids, which inhabit nearshore/coastal waters. Such ‘active’ and ‘passive’ responses of squids to environmental changes is crucial in understanding their relationships and influence on the biological processes, distribution and abundance of the fast-growing short-lived coastal loliginids. The empirical relationship between squid abundance and the variability in rainfall and sea surface temperature (SST) were explored in a tropical monsoon fishery. Monthly catch rates (catch per fishing hour) of squids in commercial trawl during 1987–2009 were used as the abundance index. Linear regression models with ARIMA errors were fitted with catch per unit hour time series as dependent variable and rainfall and SST as exogenous variables. While rainfall was observed to have a negative effect on squid abundance, the SST recorded a positive impact. ARIMA models provided satisfactory fit to observed data and forecast of 22 months. Given that the squid life-cycle is a function of their environment, this result is relevant in forecasting squid biomass for the management of tropical monsoon fisheries.