A haemagglutinin in the tissue fluid of the Pacific oyster,Crassostrea gigas,with specificity for sialic acid residues in glycoproteins

Summary An agglutinin for human red cells has a specificity for sialic acid and a high affinity for bovine salivary glycoprotein. Digestion of the glycoprotein with Pronase or neuraminidase indicated that binding of sialic acid to receptors in the agglutinin is the first tepp in the mechanism of formation of a stable complex between ligand and receptor.We wish to thank Dr. P. Walne, Conwy Laboratory, MAFF, for generous supplies of Crassostrea gigas. One of us (SWH) wishes to thank the Natural Environment Research Council for financial support.     

A new lysozyme from the eastern oyster (<Emphasis Type="Italic">Crassostrea virginica</Emphasis>) indicates adaptive evolution of <Emphasis Type="Italic">i</Emphasis>-type lysozymes

A new lysozyme (cv-lysozyme 2) with a MALDI molecular mass of 12 984.6 Da was purified from crystalline styles and digestive glands of eastern oysters (Crassostrea virginica) and its cDNA sequenced. Quantitative real time RT-PCR detected cv-lysozyme 2 gene expression primarily in digestive gland tissues, and in situ hybridization located cv-lysozyme 2 gene expression in basophil cells of digestive tubules. Cv-lysozyme 2 showed high amino acid sequence similarity to other bivalve mollusk lysozymes, including cv-lysozyme 1, a lysozyme recently purified from C. virginica plasma. Differences between cv-lysozyme 2 and cv-lysozyme 1 molecular characteristics, enzymatic properties, antibacterial activities, distribution in the oyster body and site of gene expression indicate that the main role of cv-lysozyme 2 is in digestion. While showing that a bivalve mollusk employs different lysozymes for different functions, findings in this study suggest adaptive evolution of i type lysozymes for nutrition. Received 30 August 2006; received after revision 14 October 2006; accepted 6 November 2006     

Elapidα-toxins have no effect on the cholinergic responses of bivalve myocardia

Summary Elapid-toxins (-bungarotoxin,-cobratoxin and crudeBungarus caeruleus venom) do not affect the myocardial nicotinic ACh receptors of the following bivalve molluscs:Mercenaria mercenaria, Chione cancellata, Mya arenaria, Mytilus edulis, Rangia cuneata andCrassostrea virginica.Acknowledgments. This work was supported by N.I.H. grant HL-09283 to M.J.G.; it is contribution No. 102 from the Tallahassee, Sopchoppy and Gulf Coast Marine Biological Association.     

Unique evolution of Bivalvia arginine kinases

The clams Pseudocardium, Solen, Corbicula and Ensis possess a unique form of arginine kinase (AK) with a molecular mass of 80 kDa and an unusual two-domain structure, a result of gene duplication and subsequent fusion. These AKs also lack two functionally important amino acid residues, Asp⁶² and Arg¹⁹³, which are strictly conserved in other 40-kDa AKs and are assumed to be key residues for stabilizing the substrate-bound structure. However, these AKs show higher enzyme activity. The cDNA-derived amino acid sequences of 40-kDa AKs from the blood clam Scapharca broughtonii and the oyster Crassostrea gigas were determined. While Asp⁶² and Arg¹⁹³ are conserved in Scapharca AK, these two key residues are replaced by Asn and Lys, respectively, in Crassostrea AK. The native enzyme from Crassostrea and both of the recombinant enzymes show an enzyme activity similar to that of two-domain clam AKs and at least twofold higher than that of other molluskan AKs. Although the replacement of Asp⁶² or Arg¹⁹³ by Gly in normal AK causes a considerable decrease in V_max (6–15% of wild-type enzyme) and a two- to threefold increase in K_m for arginine, the same replacement in Scapharca AK had no pronounced effect on enzyme activity. Together with the observation that bivalve AKs are phylogenetically distinct from other molluskan AKs, these results suggest that bivalve AKs have undergone a unique molecular evolution; the characteristic stabilizing function of residues 62 and 193 has been lost and, consequently, the enzyme shows higher activity than normal.Received 14 October 2003; accepted 1 November 2003     

An apparatus for the calibration of electromagnetic flowprobes on small veins in situ

Electromagnetic flowprobe calibration must be done under controlled conditions similar to those encountered experimentally. This in situ calibration apparatus is simple in design, inexpensive, and provides pressure and flow conditions analogous to those found in small veins in vivo.     

Phospholipid composition of cardiac (Na+ + K+)-ATPases from various species

There is a difference in phospholipid composition of cardiac (Na+ + K+)-ATPase preparations between species which are sensitive to ouabain and those which are not. Sphingomyelin is higher and phosphatidylcholine is lower in the enzymes from sensitive species than in those from insensitive ones. Lysophosphatidylcholine is detectable only in the latter preparations.     

Familial association in serum IgE levels.

The serum IgE levels measured by RIST correlated closely with those obtained by the single radioimmunodiffusion method. Values for husband and wife were closely related as were those between father and daughter but in contrast to previous observations no significant relationship existed between IgE levels for mother and son.     

Acute effects of unilateral or bilateral superior cervical ganglionectomy on rat pineal N-acetyltransferase activity and melatonin content.

Acute bilateral superior cervical ganglionectomy (SCGX) completely prevents the nocturnal rises in pineal N-acetyltransferase (NAT) activity and melatonin content in male rats kept in light-dark cycles of 14:10. Unilateral SCGX causes the NAT and melatonin levels to be intermediate between those in sham-operated control rats and those in rats from which both ganglia had been removed.     

Orchid: A Cultural History

By now, the story of T. D. Lysenko's phantasmagoric career in the Soviet life sciences is widely familiar. While Lysenko's attempts to identify I. V. Michurin, the horticulturist, as the source of his own inductionist ideas about heredity are recognized as a gambit calculated to enhance his legitimacy, the real roots of those ideas are still shrouded in mystery. This paper suggests those roots may be found in a tradition in Russian biology that stretches back to the 1840s—a tradition inspired by the doctrines of Jean-Baptiste Lamarck and Etienne and Isidore Geoffroy Saint-Hilaire. The enthusiastic reception of those doctrines in Russia and of their practical application—acclimatization of exotic life forms—gave rise to the durable scientific preoccupation with transforming nature which now seems implicated in creating the context for Lysenko's successful bid to become an arbiter of the biological sciences.     

An apparatus for the calibration of electromagnetic flowprobes on small veins in situ

Summary Electromagnetic flowprobe calibration must be done under controlled conditions similar to those encountered experimentally. This in situ calibration apparatus is simple in design, inexpensive, and provides pressure and flow conditions analogous to those found in small veins in vivo.This work was supported by the Harold Tanenbaum Department of Research, Mt Sinai Hospital, Toronto, Ontario. Dr. Kuzon is supported by the Medical Research Council of Canada.     

Experiments with interactional expertise

‘Interactional expertise’ is developed through linguistic interaction without full scale practical immersion in a culture. Interactional expertise is the medium of communication in peer review in science, in review committees, and in interdisciplinary projects. It is also the medium of specialist journalists and of interpretative methods in the social sciences. We describe imitation game experiments designed to make concrete the idea of interactional expertise. The experiments show that the linguistic performance of those well socialized in the language of a specialist group is indistinguishable from those with full blown practical socialization but distinguishable from those who are not well socialized. The imitation game can also be used to indicate whether an individual can enter an esoteric domain and master the interactional expertise, a skill required by interpretative sociologists of science, anthropologists, ethnographers, and the like.     

Phospholipid composition of cardiac (Na++K+)-ATPases from various species

Summary There is a difference in phospholipid composition of cardiac (Na⁺+K⁺)-ATPase preparations between species which are sensitive to ouabain and those which are not. Sphingomyelin is higher and phosphatidylcholine is lower in the enzymes from sensitive species than in those from insensitive ones. Lysophosphatidylcholine is detectable only in the latter preparations.     

Rethinking synchronization of mammalian cells for cell cycle analysis

An analysis of different classes of forced or batch synchronization methods reveals why these methods, in theory, do not produce synchronized cultures. Cells may be aligned for a particular property after specific treatments, but these aligned cells do not correspond to any particular cell age during the normal cell cycle. The experimental methods analyzed are those that arrest cells with a G1 phase amount of DNA, those that inhibit DNA synthesis, and those that arrest cells at mitosis. Release of arrested cells from inhibition does not produce cells reflecting cells during the normal division cycle. Thus, cells produced by batch or forcing methods are not experimental models for analysis of the normal cell cycle.     

Epimerases: structure, function and mechanism

Carbohydrates are ideally suited for molecular recognition. By varying the stereochemistry of the hydroxyl substituents, the simple six-carbon, six-oxygen pyranose ring can exist as 10 different molecules. With the further addition of simple chemical changes, the potential for generating distinct molecular recognition surfaces far exceeds that of amino acids. This ability to control and change the stereochemistry of the hydroxyl substituents is very important in biology. Epimerases can be found in animals, plants and microorganisms where they participate in important metabolic pathways such as the Leloir pathway, which involves the conversion of galactose to glucose-1-phosphate. Bacterial epimerases are involved in the production of complex carbohydrate polymers that are used in their cell walls and envelopes and are recognised as potential therapeutic targets for the treatment of bacterial infection. Several distinct strategies have evolved to invert or epimerise the hydroxyl substituents on carbohydrates. In this review we group epimerisation by mechanism and discuss in detail the molecular basis for each group. These groups include enzymes which epimerise by a transient keto intermediate, those that rely on a permanent keto group, those that eliminate then add a nucleotide, those that break then reform carbon-carbon bonds and those that linearize and cyclize the pyranose ring. This approach highlights the quite different biochemical processes that underlie what is seemingly a simple reaction. What this review shows is that each position on the carbohydrate can be epimerised and that epimerisation is found in all organisms.     

Spectroscopy of aqueous solutions: protein and DNA interactions with water

This review emphasises the need to use spectroscopy in order to understand the behaviour of water, and summarises the background of the subject. The various forms of spectroscopy that are especially informative are described, with particular reference to near-infrared (NIR) spectrophotometry. The key results are outlined, first those obtained with small molecules and ions, and second those involving proteins, DNA and cell membranes. Finally, some interpretations are offered which include the novel but possibly controversial concept of free OH and free lone-pair groups.     

Histochemistry of some trout respiratory muscles.

A histochemical study has been made of the main cranial muscles which produce ventilation movements of the rainbow trout. It is shown that a greater proportion of red(aerobic) fibres is present in those muscles known to be active during shallow ventilation than those which become active at greater ventilation volumes. An ordered recruitment of red, pink and white fibres within these muscles is also likely.     

Methods of probing the interactions between small molecules and disordered proteins

It is generally recognized that a large fraction of the human proteome is made up of proteins that remain disordered in their native states. Despite the fact that such proteins play key biological roles and are involved in many major human diseases, they still represent challenging targets for drug discovery. A major bottleneck for the identification of compounds capable of interacting with these proteins and modulating their disease-promoting behaviour is the development of effective techniques to probe such interactions. The difficulties in carrying out binding measurements have resulted in a poor understanding of the mechanisms underlying these interactions. In order to facilitate further methodological advances, here we review the most commonly used techniques to probe three types of interactions involving small molecules: (1) those that disrupt functional interactions between disordered proteins; (2) those that inhibit the aberrant aggregation of disordered proteins, and (3) those that lead to binding disordered proteins in their monomeric states. In discussing these techniques, we also point out directions for future developments.     

Forecasting Interest Rates and Yield Spreads: The Informational Content of Implied Futures Yields and Best-fitting Forward Rate Models

Forecasts of interest rates for different maturities are essential for forecasts of asset prices. The growth of derivatives markets coupled with the development of complex theories of the term structure of interest rates have provided forecasters with a rich array of variables for predicting interest rates and yield spreads. This paper extends previous work on forecasting future interest rates and yield spreads using market data for T-bills, T-Notes, and Treasury Bond spot and futures contracts. The information conveyed in technical models that use market data is also assessed, using a recent innovation in interest rate modelling, the maximum smoothness approach. Forecasts from this model are compared with predicted yields and yield spreads derived from futures prices as well as with those of the random walk model. The results show some evidence of market segmentation, with more arbitrage evident for nearby maturities. Market participants appear to show a greater degree of consensus on short-term interest rates than on longer-term interest rates. There is some indication that forecasts from the futures markets are marginally better than those provided by those of the maximum-smoothness approach, consistent with the informational advantages of futures markets. Finally, futures and maximum-smoothness market forecasts are shown to outperform those of the random walk model.© 1997 John Wiley & Sons, Ltd.     

L'introuvable révolution scientifique. Francesco Redi et la génération spontanée

The Italian naturalist F. Redi established in 1668 that insects are not produced by the way of equivocal generation, contrary to what was affirmed since the Antiquity. For that reason, many historians of sciences acknowledge his experiments, like those of Galileo, Boyle or Huygens, contributed to the scientific revolution that emerges in the seventeenth century in Western Europe. Based on the commentaries sparked off by the works of Redi, in his time and today, our contribution shows on the contrary that nothing at all in his approach reveals such an intention. Questioning without arrogance the knowledge and the authority of the Ancients, careful interrogation of the literariness of the Scriptures, adoption of an experimental reasoning still dependent on the scholastic argumentation, those are the main characteristics of his work. But those also could be the ones of Harvey, Borelli or Swammerdam's works. To defend the idea of a scientific revolution in the life sciences similar in its conditions and tempo to the one described in the history of the physical sciences would be a mistake, not to say an anachronism.     

The evolution of duplicate gene expression in the carp (Cyprinus carpio)

Summary The carp, Cyprinus carpio (Teleostomi), is a tetraploid species which currently expresses 52% of its duplicate enzyme loci. This level of duplicate gene expression in this cyprinid species is comparable to those observed in tetraploid Catostomidae, but higher than those in tetraploid Cobitidae.This research was supported by NSF grants GB 43995 and PCM 76-08383 to G.S.W. and by a Cell Biology Traineeship to S.D.F.We thank Suzanne Fisher and Dave Philipp for their helpful comments.