Bythinella Moquin-Tandon, 1856 (Gastropoda: Rissooidea: Bythinellidae) in Romania: species richness in a glacial refugium

The buff-throated partridge, Tetraophasis szechenyii Madarász, 1885, is a species endemic to west China. The complete mitochondrial genome of this species was sequenced. It was 16,706 base pairs (bp) in length and contained 13 protein-coding genes, 2 ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes, and a control region (CR). The phylogenetic relationships of the buff-throated partridge and 19 other Phasianidae species were inferred by Bayesian inference and maximum likelihood analyses based on 12 protein-coding genes. With the exception of a few nodes, most internal branches were supported by a high Bayesian posterior probability (BPP?=?1.0). The resulting trees clarified the phylogenetic position of T. szechenyii within Phasianidae. The genetic diversity and population structure of the Pamulin population of T. szechenyii were examined based on the mitochondrial DNA CR. Nucleotide sequence analysis defined 18 haplotypes in 24 individuals. Haplotype diversity (h) was 0.953 and nucleotide diversity (π) was 0.0044. The results revealed that the genetic diversity of this population was not particularly low. Combined with the field work conducted by our lab, we found that members of the Pamuling population are cooperative breeders and the population may contain individuals from neighbouring groups. Our work provided genetic background information for the conservation and management of this species.     

The complete mitochondrial genome of the Chinese Sika deer (Cervus nippon Temminck, 1838), and phylogenetic analysis among Cervidae,Moschidae and Bovidae

The complete mitochondrial genomes of the Sichuan Sika deer (Cervus nippon sichuanicus) and the South China Sika deer (Cervus nippon kopschi) were determined. Their sizes were 16,429 and 16,428 base pairs, respectively. The similarity of the mitochondrial DNA genome among subspecies of the Chinese Sika deer was calculated, and the values estimated from complete nucleotide sequences and entire amino-acid sequences were 98.4–99.9% and 99.7–99.9%, respectively. Molecular phylogenetic analyses were conducted using maximum parsimony and Bayesian inference methods based on the sequences of 12 concatenated heavy-strand encoded protein-coding genes. The consensus of phylogenetic trees supported the monophyly of Moschidae, Cervidae and Bovidae, and placed Moschidae as a sister group to Cervidae/Bovidae. The relationships among Chinese Sika deer inferred from the phylogenetic analysis were inconsistent with subspecies designations and the present geographic distribution. Our complete mitochondrial genomes will be available as important and basic data for phylogenetics, breeding, genetics and conservation in Cervidae.     

The complete mitochondrial genome and phylogenetic analysis of forest musk deer (Moschus berezovskii)

The complete mitochondrial genome sequence of the forest musk deer (Moschus berezovskii) was determined. Sequence analysis revealed that the organization of the mitochondrial genome in the forest musk deer was consistent with that of other reported mammals. Molecular phylogenetic analysis of the forest musk deer and 22 other species of the order Cetartiodactyla was conducted using maximum parsimony and Bayesian inference methods based on the 12 heavy‐strand protein‐coding genes, RNA genes and their combination. Both the consensus phylogenetic trees and the topologies test supported the monophyly of Cervidae, Bovidae and Cetancodonta, and placed Moschidae as a sister group to Cervidae/Bovidae.     

An enigma from Australia: a new variation on the corophioid theme (Crustacea: Amphipoda)

Aetiopedes gracilis gen. et sp. nov. (Amphipoda : Isaeidae) is described from southern Australian (Tasmanian, Victorian) shallow coastal sand habitats. The taxon superficially resembles an ampeliscoid having antenna 2 markedly longer than antenna 1 and peraeopods 3–4 with long, slender dactyls. The possibility is raised that glandular peraeopods may be a synapomorphy associating Ampeliscoidea with Corophioidea as sister groups. The structure of peraeopods 3–4 (merochelate), labrum (toothed) and telson (shortened) are all autapomorphies peculiar to the new taxon. Within the Isaeidae, Aetiopedes appears to be closest to Amphideutopus. The relationships of these taxa are discussed in relation to the hypotheses of Barnard & Thomas (1987) on the systematics of the Neomegamphopidae.     

Relationships of the South African lizards assigned to Aporosaura,Meroles and Pedioplanis (Reptilia: Lacertidae)

Phylogenetic analyses, using parsimony and compatibility methods, were carried out on the South African lacertid lizards assigned in recent times to Aporosaura, Meroles and Pedioplanis. These were based on 80 primary and 102 binary morphological characters which were drawn from osteology, external features, muscles, kidneys and reproductive systems. Contrary to some previous interpretations, there are two well-defined clades: Meroles plus Aporosaura, and Pedioplanis; these form successive branches on the main stem of the phylogeny of advanced lacertids. The clades show considerable parallel development of derived features, presumably because they had very similar initial genetic potential. Relationships within the two groups are shown on p. 800 and p. 802. As Aporosaura anchietae is sister taxon to a clade consisting of three of the seven species of Meroles, it has been transferred to that genus. Relationships in Meroles-Aporosaura are very well substantiated, in contrast to the situation in Pedioplanis. This difference appears to be related to the different kinds of evolutionary history that the two groups have had. The Meroles-Aporosaura clade has spread progressively into increasingly stringent and singular aeolian sand environments which have elicited the production of many, often unique, derived character states related to the functional problems of survival in such situations. As these states are rarely duplicated in outgroups, the characters concerned are easily polarized. This, together with their abundance, means that a robust basis for phylogenetic inference is available. In contrast, Pedioplanis exhibits relatively limited ecological radiation of a kind that also occurs in related groups, and the functionally related derived states elicited are fewer and less distinctive. In fact, production of a phylogeny for Pedioplanis is very dependent on genital characters which seem to be substantially independent of the main ecological changes that have occurred in the genus. The premaxilla is embraced dorsally by the anterior processes of the maxillae in most lacertids, but the processes are less extensive in two sister species of Pedioplanis, P. burchelli and P. laticeps. This modified condition also occurs in the genera Eremias, Acanthodactylus, Mesalina and Ophisops, which together constitute a clade that forms the sister group of Pedioplanis. The modification provides extra evidence for the holophyly of the clade, even though presence in some Pedioplanis shows it to be homoplasious.     

The Eucerotinae: a Gondwanan origin for a cosmopolitan group of Ichneumonidae?

A new genus and species of the formerly monobasic and predominantly amphitropical, ichneumonid subfamily, Eucerotinae, is described from Chile. A phylogenetic analysis of the redefined Eucerotinae is undertaken. Barronia araucaria gen. et sp. n. has a sister-group relationship with Euceros. The southern hemisphere species of the latter genus were found to comprise a monophyletic clade, the sister group to all other Euceros species. Similarly all north temperate Euceros species form a monophyletic clade, the sister group of which occurs in Madagascar. Within the former clade, the North American species form a monophyletic group, the sister species of which is Palaearctic. Several other groups of Palaearctic taxa have a sister-group relationship to this lineage. These results suggest the Eucerotinae had an ancient origin on Gondwanaland in the lower Cretaceous, prior to the separation of the Indo-Madagascar terrane from the Australian-Antarctic-South American tectonic plate. We hypothesize the Palaearctic fauna colonized Eurasia following the impaction of India on to its southern margin, and that the North American fauna is derived from a single circum-polar dispersal from Eurasia. Our results do not support an earlier hypothesis that the Eucerotinae arose as hyperparasitoids of Symphyta. Evidence suggests the group arose as parasitoids of ophioniform ichneumonids attacking lepidopterous larvae feeding on gymnosperms or anemophilous angiosperm trees.     

A new species of arboreal salamander (Caudata: Plethodontidae: Pseudoeurycea) from the mountains of Oaxaca,Mexico

Recent surveys of the plethodontid salamander fauna of Oaxaca, Mexico, disclosed the existence of a new, morphologically distinct arboreal species of the genus Pseudoeurycea. The new species, described here, is from the Sierra Mazateca in northern Oaxaca. Sequences of 1833 base pairs of the 16S, cytochrome b and ND4 mitochondrial DNA (mtDNA) genes from the new taxon were used to assess its phylogenetic position. Previous phylogenetic analyses based on mtDNA supported recognition of four clades within Pseudoeurycea: P. bellii, P. gadovii, P. juarezi and P. leprosa-Lineatriton species groups. One additional species, P. unguidentis, was not closely allied to any of the four groups. Re-analysis including the additional sequences reported here establishes a sister-group relationship between the new species and P. unguidentis. Moreover, it supports this clade as part of the P. juarezi species group.     

A new subfamily of fossorial colubroid snakes from the Western Ghats of peninsular India

ABSTRACT

We report molecular phylogenetic and dating analyses of snakes that include new mitochondrial and nuclear DNA sequence data for three species of the peninsular Indian endemic Xylophis. The results provide the first molecular genetic test of and support for the monophyly of Xylophis. Our phylogenetic results support the findings of a previous, taxonomically restricted phylogenomic analysis of ultraconserved nuclear sequences in recovering the fossorial Xylophis as the sister taxon of a clade comprising all three recognised extant genera of the molluscivoran and typically arboreal pareids. The split between Xylophis and ‘pareids’ is estimated to have occurred on a similar timescale to that between most (sub)families of extant snakes. Based on phylogenetic relationships, depth of molecular genetic and estimated temporal divergence, and on the external morphological and ecological distinctiveness of the two lineages, we classify Xylophis in a newly erected subfamily (Xylophiinae subfam. nov.) within Pareidae.

urn:lsid:zoobank.org:pub:43BDE72C-6823-4D6A-8601-482862556D78

urn:lsid:zoobank.org:act:AD3486DF-D874-4CFD-8EAE-14FF3E403AF9     

New taxa of the parasitic quill mites associated with accipitrid birds indicating close relationship of falconid birds to Psittaci–Columbi clade

Two new species of syringophilid mites (Acari: Prostigmata: Cheyletoidea: Syringophilidae) associated with accipitrid diurnal raptors (Falconiformes: Accipitridae) are described and figured: Megasyringophilus aquilus sp. nov. from two host species of the genus Aquila, A. rapax (Temminck, 1828) and A. pomarina Brehm, 1831, and Peristerophila accipitridicus sp. nov. from Terathopius ecaudatus (Daudin, 1800). Relationships between birds of prey and Psittaci–Columbi clade are briefly discussed.     

Phylogeny of Chone Krøyer, 1856 (Polychaeta: Sabellidae) and related genera

An analysis was undertaken to test the monophyly of the sabellid genus Chone Krøyer using maximum parsimony methodology. Cladistic analysis revealed three monophyletic genera whose respective members were assigned previously to Chone. Chone sensu stricto (containing the type species) is defined by the presence of broadly rounded dorsal lips and thoracic uncini with a large tooth above the main fang, followed by a series of smaller teeth. Dialychone Claparède is re‐established for the second genus and a new name – Paradialychone – is proposed for terminals nested in the third clade. Dialychone and Paradialychone gen. nov. are the sister groups of Chone, defined by the presence of a simple pre‐pygidial depression and modified posterior abdominal uncini. Amphicorina Claparède is basal within Sabellinae and Euchone Malmgren is the sister group of Chone, Paradialychone gen. nov. and Dialychone. The analysis supports the transfer of C. princei and C. reayi to Jasmineira Langerhans.     

A new species of Nebalia (Crustacea,Leptostraca) from Unguja Island (Zanzibar), Tanzania,East Africa,with a phylogenetic analysis of leptostracan genera

Nebalia brucei sp. nov. is described from specimens taken in traps from Unguja Island (Zanzibar), Tanzania, East Africa. The species is characterized by the following unique combination of characters: a short and broad rostrum; a carapace that is large compared to overall body size and that covers pleonite 4; a basally narrow compound eye; and acutely pointed denticles at the dorsal margin of pleon segments 6 and 7. Cladistic analyses of the relationships of the seven recognized leptostracan genera resulted in two hypotheses. One tree has Nebaliopsis as sister group to the remaining leptostracans and supports the monophyly of Nebaliidae. The other tree has Paranebalia as sister group to the remaining leptostracans and Nebaliidae as paraphyletic with respect to Nebaliopsis. Both trees contain a Nebalia/Dahlella/Sarsinebalia clade.     

Further morphological and molecular studies of driftwood hoppers (Crustacea: Amphipoda: Talitridae) from Mediterranean/north-east Atlantic coastlines

An unknown talitrid was discovered in 2011 in the Swale, UK, living in driftwood. Sequencing of multiple mitochondrial and nuclear genes (cytochrome oxidase I, 18S rDNA and 28S rDNA) confirms that the unknown taxon was close to Orchestia mediterranea A. Costa 1857. The driftwood in which it was found was of Douglas fir (Pseudotsuga menziesii), probably imported from North America. Relative growth methods allow us to reject the null hypothesis that the unknown taxon was a juvenile Orchestia mediterranea. This is because the unknown taxon initiates sexual maturation at an earlier moult number (neoteny) and is predicted to reach terminal moult stages at a much smaller size (dwarfism) than its closest relative O. mediterranea. Both molecular and morphological data confirm that the unknown taxon from the Swale, UK, is a new driftwood specialist taxon, distantly related to the driftwood specialist genus Macarorchestia. Additional data for body length and sex ratios are presented for Macarorchestia. In addition, relative growth methods have shown that the driftwood species Orchestia microphtalma Amanieu and Salvat 1964 is closer to the genus Macarorchestia rather than to the wrack generalist one, Orchestia. This evidence is in line with the molecular results that do not cluster morphologically defined species of Orchestia monophyletically.     

Phylogenetic relationships of Mesobuthus eupeus (C.L. Koch, 1839) inferred from COI sequences (Scorpiones: Buthidae)

In this study, the first molecular phylogenetic analysis of Mesobuthus eupeus in Iran is presented based on sequence data of a ～ 700-base-pair fragment of cytochrome C oxidase, subunit I. Phylogenetic relationships were inferred using parsimony, maximum likelihood and Bayesian inference. The results support monophyly of M. eupeus, but there is a clear divergence between northern and southern clades. The northern clade includes four subspecies – M. e. eupeus, M. e. philippovitschi, M. e. afghanus and M. e. thersites; whereas the southern clade is comprised of two others – M. e. phillipsi and M. e. kirmanensis. Accordingly, possible scenarios for the evolution and phylogeographic structure of M. eupeus based on the geological history of the Iranian Plateau were proposed. The observation of two distinct lineages supports the proposal that M. eupeus might be a species complex composed of species with highly similar morphological features.     

Description of Kashmirobroscus gen. nov. with two new species from the Northwest Himalaya,and remarks on the East Asian genus Eobroscus Kryzhanovskij, 1951 (Coleoptera: Carabidae: Broscini)

The ground beetle taxon Kashmirobroscus gen. nov. and two species Kashmirobroscus mirabilis sp. nov. and Kashmirobroscus ortrudae sp. nov. are described from the Northwest Himalaya of Pakistan. Diagnostic characters of both new species are figured and their distributional areas are mapped. Several features of the new genus are discussed to work out its systematic position within Broscini. As a result, Kashmirobroscus is proposed as a sister taxon of the East Asian genus Eobroscus Kryzhanovskij, 1951, of the subtribe Broscina. In addition, new data relating to systematics and distribution of all the known species of the genus Eobroscus are provided. The taxon Orobroscus Morita, 1990 is proposed as a junior synonym of Eobroscus Kryzhanovskij, 1951, and Eobroscus uenoi Morita, 1995 is proposed as a junior synonym of Eobroscus bhutanensis Morvan, 1982, a macropterous species with a wide distribution in the eastern parts of High Asia. http://www.zoobank.org/urn:lsid:zoobank.org:pub:1775013D-FE87-41CA-87AF-D730E809331B     

East–west differentiation in the Marcusenius macrolepidotus species complex in Southern Africa: the description of a new species for the lower Cunene River,Namibia (Teleostei: Mormyridae)

This paper critically compares the Southern African bulldog fish species Marcusenius macrolepidotus (Peters, 1852), inhabiting the eastern Lower Zambezi River, and Marcusenius altisambesi Kramer et al., 2007, inhabiting the central Upper Zambezi River, with bulldog fish samples from the western lower Cunene River, a 2600-km range from the Indian Ocean to the Atlantic. The three species or forms are well differentiated in morphology and molecular genetics, and differentiation is also present in electric organ discharges. Marcusenius altisambesi and the Cunene sample, which we recognize as Marcusenius multisquamatus sp. nov., are closely related and form a sister taxon to M. macrolepidotus. This result is based on the analysis of mitochondrial cytochrome b sequences and genomic Inter-simple-sequence-repeat fingerprinting. Morphological adaptations to life in a torrential escarpment river seem to be present in M. multisquamatus sp. nov. when compared with M. altisambesi, which lives in a reservoir river that periodically floods the savannah. http://www.zoobank.org/urn:lsid:zoobank.org:pub:8FE68494-9ED9-428E-B181-E814D25493F2     

First record of a non-pollinating fig wasp (Hymenoptera: Sycophaginae) from Dominican amber,with estimation of the size of its host figs

Fig trees and their pollinating fig wasps arose about 75 million years ago in the Cretaceous period. Several other groups of chalcid wasps also utilize figs for larval development, including sycophagines, the putative sister group to pollinating fig wasps. Whereas stone and amber fossil pollinators are known, no fossils representing non-pollinating fig wasp groups have been confirmed previously. Here, we describe the first Sycophaginae from the c.15–20 Ma Dominican amber, Idarnes thanatos sp. nov. Farache, Rasplus, Pereira and Compton, and discuss its relationships within the Idarnes carme species group. Additionally, we use linear regression to compare body size, ovipositor sheaths length, and host fig size data from extant Idarnes species to estimate the size of its host figs. Idarnes thanatos was most likely associated with small to medium sized figs (diameter ≤1.0 cm), that were likely to have been dispersed by birds and primates. The discovery of this close relative of extant non-pollinating fig wasps suggests that early Miocene and modern fig wasp communities may share similar ecological and functional features.     

Ophicardelus (Mollusca,Pulmonata) in eastern Australia: how many taxa?

The common south-eastern Australian estuarine ellobiid snails belonging to Ophicardelus have been considered to be one variable taxon by some authors, and three largely sympatric species by others. This study was undertaken to determine the number of taxa present. Different types of data collected included shell shape, allozyme electrophoresis, shell and radular morphology, anatomy and geographic range. These data sets were then examined for consistent discontinuities, and the results showed that the nominal species could be distinguished by a combination of shell shape and sculpture. Individuals from each nominal species also grouped together using allozyme data, although one taxon (Ophicardelus quoyi) is sometimes paraphyletic based on these data. There are several differences in the anatomy and radular morphology that separate the three taxa. These included marked differences in the penial complex, vagina, and presence or absence of a pallial gland. The three taxa also have different geographic ranges, albeit with most of their ranges in sympatry. Based on these differences, Ophicardelus ornatus, O. quoyi and O. sulcatus should be regarded as valid species.     

Phylogenetic implications of ovipositor structure in Eucharitidae and Perilampidae (Hymenoptera: Chalcidoidea)

The external and cross-sectional morphology of the ovipositor was examined for 21 genera and 28 species of Philomidinae, Perilampidae and Eucharitidae. Eleven characters were scored and either mapped onto existing topologies reflecting the relationships of genera, or included in a larger data set focused on the generic relationships of Eucharitidae and analyzed using parsimony. The presence of a setiform flap in the ventral wall of the dorsal valve supported the monophyly of Perilampinae and possibly Chrysomalla (Chrysolampinae) + Perilampinae. Monophyly of Eucharitidae was supported by a thinning of the dorsal wall of the dorsal valve. One of two islands of most parsimonious trees that have recently been proposed was selected on the basis of fewer step changes as a result of both character mapping and parsimony analysis. Within Eucharitinae, this would support a clade that includes Kapala, Stilbula and Pseudochalcura, with Schizaspidia and Chalcura as its sister group. By mapping characters, an additional hypothesis of monophyly of Anorasema and Gollumiella was preferred, which on the basis of the pruned topologies was a single step shorter than the preferred islands of trees.