Identification of <Emphasis Type=Italic>Fallopia</Emphasis> species based on the chloroplast <Emphasis Type=Italic>mat</Emphasis>K gene sequences

In order to develop an efficient identification method for Fallopia plants and drugs, molecular analysis of the partial matK gene sequences was performed on 6 Fallopia species. Based on the matK sequences, a phylogenetic tree was constructed, which showed that different populations of inter- and intra-species could be specified and distinguished. The matK gene sequences of the 6 Fallopia species were all found to be of 1 271 bp in length, with some nucleotide variations throughout the entire sequences. The nucleotide difference at position 1 041 could distinguish F. denticulata from others, while specific nucleotide at position 1 154 became identification markers for F. aubertii. Moreover, four specific marker sites for F. multiflora var. ciliinerve at positions 216, 224, 1 060 and 1 179, seven for F. convolvulus at 318, 765, 772, 874, 936, 952 and 1 036, and seven for F. dentate alata at 111, 192, 366, 450, 457, 1 032 and 1 074 were also observed. By detecting the marker nucleotides and analyzing the phylogenetic relationship, the botanical origins of five inspected drugs were determined, suggesting that matK sequences can be used for authenticating Fallopia plants and drugs.     

Properties of a class of groups on <Emphasis Type=Italic>Z</Emphasis><Subscript><Emphasis Type=Italic>m</Emphasis></Subscript>

In this paper, we obtain the factorization of direct production and order of group GL(n, Z _m ) in a simple method. Then we generalize some properties of GL(2, Z _p ) proposed by Huppert, and prove that the group (GLleft( {2,{Z_{{z^lambda }}}} right)) is solvable. We also prove that group GL(n, Z _p ) is solvable if and only if GL(n, Z _p ) is solvable, and list the generators of groups GL(n, Z _p ) and SL(n, Z _p ). At last, we prove that PSL(2, Z _p )(p > 3) and PSL(n, Z _p )(n > 3) are simple.     

A novel gene <Emphasis Type=Italic>R049</Emphasis> identified in uropathogenic <Emphasis Type=Italic>Escherichia coli</Emphasis> provides partial protection in mice from colonization

Uropathogenic Escherichia coli (UPEC) is the most common causative organism of human urinary tract infection (UTI). Several UPEC virulence factors have been identified, but more are yet to be found. We previously identified a novel 789-bp-long DNA fragment (named R049) in UPEC strain 132 using a suppressive subtractive hybridization technique. In the present study, we used genome walking to elongate the sequence of this fragment to obtain the whole gene sequence and examined the role of this gene product in generating protective immunity. Through bioinformatic analysis, we predicted that this gene is a 1311-bp open reading frame (ORF), which we designated ORF_R049 (GenBank accession No.: EF488001). We further constructed a prokaryotic expression system to express full recombinant R049 protein and isolated and purified the protein through IPTG induction and nickel affinity chromatography. Using mouse immunosera generated by the purified protein, we confirmed the natural expression and outer membrane localization of the protein in wild-type strain UPEC132 by Western blotting. To test the potential of this protein as a vaccine candidate, we immunized mice with the recombinant protein before challenging them with UPEC132 through the urinary tract. The results showed significantly reduced bacterial colonization in the urine and kidneys of the immunization group compared with the control group. However, the degree of renal pathological damage was not significantly improved in the immunized mice. Our study has identified a novel gene of UPEC which can generate protective immunity against UTI. This novel gene provides a promising new vaccine candidate.     

Accurate localization and excision of genomic islands in four strains of <Emphasis Type=Italic>Pseudomonas aeruginosa</Emphasis> and <Emphasis Type=Italic>Pseudomonas fluorescens</Emphasis>

Mobile genomic islands (GIs) can be excised from the chromosome, then form a circular intermediate and be reintegrated into the chromosome by the GI internal integrase. Some mobile GIs can also be transferred into a new receptor cell by transformation, conjugation, or transduction. The action sites of the integrase are usually flanked direct repeats (DRs) of the GIs. Accurate localization of the flanking sequences is a precondition for determining the mobility of the GI. Mobile GIs are generally associated with transfer RNAs (tRNAs). Based on the correlation between flanking sequences and tRNA sequences, the flanking sequences of 11 putative mobile GIs in Pseudomonas aeruginosa PAO1, P. aeruginosa PA14, P. fluorescens Pf-5 and P. fluorescens Pf0-1 were identified. Among the 11 GIs, Pf0-1GI-1 is responsible for benzoate degradation. PAO1GI-1, Pf5GI-2, Pf5GI-3, and Pf5GI-4 were confirmed experimentally to be excised from a chromosome to form a circular intermediate. The action sites of the integrases are these GIs direct repeats. Due to distinct DRs, cutting sites for the internal integrase of PAO1GI-1, Pf5GI-2, Pf5GI-3 and Pf5GI-4 were determined outside the T-loop of the tRNA^Gly gene, outside the anticodon loop of the tRNA^Ser gene and tRNA^Lys gene, and at the asymmetric 3′-end of the tRNA^Leu gene, respectively. PAO1GI-1 and other mobile GIs may be transferred into many different strains that belong to different phyla because of the clear flanking sequences. This study describes basic information about the action sites of the integrases, assesses the mobility of GIs, and can help design and transfer mobile GIs to candidate strains.     

Formation and causes of NO<Subscript><Emphasis Type=Italic>x</Emphasis></Subscript> pollution on the east side of the Taihang Mountains in China

Tropospheric column amounts of NO 2 from OMI/Aura products were applied to investigate the seasonal variation of NO x on the east side of the Taihang Mountains (ESTM) in China. The NO 2 concentration varied seasonally, with winter maxima and summer minima. To explore the causes of the heavy NO 2 pollution in this region, wind field simulations were conducted by using the Fifth-Generation NCAR/Penn State Mesoscale Model (MM5). MM5 simulations showed that wind directions in the ESTM region were dominated by northeasterly and northwesterly winds throughout the year and to a lesser degree by southwesterlies. Elevated NO 2 concentrations (higher than 50×10 15 molec/cm 2 ) occurred in three meteorological situations: convergent wind fields (5 days), northeasterly winds (2 days), and calm days (1 day) in January. Although the local anthropogenic NO x emission strength was not so high as that in other developed areas, the calms and frequent occurrence of convergent wind fields, as well as unfavorable terrains for diffusion, resulted in the accumulation of atmospheric pollutants and hence heavy NO x pollution. Furthermore, long-distance NO x transportation from the Beijing-Tianjin-Tangshan region to the ESTM area could be seen when the wind was from a northeasterly direction, especially under high wind speeds.     

Construction of <Emphasis Type=Italic>k</Emphasis>-ary pseudorandom elliptic curve sequences

We present a method for constructing k-ary sequences over elliptic curves.Using the multiplicative character of order k of finite fields,we construct a family of k-ary pseudorandom elliptic curve sequences.The pseudorandom measures,such as the well-distribution measure,the correlation measure of order ■,and the linear complexity are estimated by using certain character sums.Such sequences share the same order of magnitude on the well-distribution measure,the correlation measure of order ■ as the ’truly’ random sequences.The method indicates that it is possible to construct ’good’ pseudorandom sequences over elliptic curves widely used in public key cryptography.     

Nonextensivity and the <Emphasis Type=Italic>q</Emphasis>-distribution of a relativistic gas under an external electromagnetic field

We investigate the nonextensivity and the q-distribution of a relativistic gas under an external electromagnetic field. We derive an expression for the nonextensive parameter q based on the relativistic generalized Boltzmann equation, the relativistic q-H theorem and the relativistic version of the q-power-law distribution function in the nonextensive q-kinetic theory. We thus provide the connection between the parameter q≠1 and the spatial-temporal derivatives of the temperature field of the gas as well as the four-potential, and thereby present a clearly physical meaning for the nonextensivity for the relativistic gas.     

Physicochemical characterization of <Emphasis Type=Italic>Baizhi</Emphasis> particles by ultrafine pulverization

Baizhi, as a medicinal plant, has been demonstrated to be useful for the treatment of aches and pains in China. The physicochemical characterization of Baizhi particles is greatly influenced by ultrafine pulverization. To study the physicochemical characterization of Baizhi, the raw plant material of Baizhi was ground to 6 μm particles by a high speed centrifugal sheering (HSCS) pulverizer. The micron particles were characterized by optical microscopy and scanning electron microscopy (SEM). Imperatorin is one of the active ingredients of Baizhi, and its extraction yield is determined to evaluate the chemical characterization of Baizhi powder. Imperatorin was analyzed by high performance liquid chromatography (HPLC). The results show that after ultrafine pulverization, the plant cell walls are broken into pieces and the extraction yield of imperatorin is increased by 11.93% compared with the normal particles.     

A Group-Oriented （t,n） Threshold Signature Scheme with Traceable Signers

A group-oriented （t, n） threshold signature scheme employs the cryptographic techniques of secret share, allows any subset of t players out of n players to sign message on behalf of the group and disallows the creation of a valid signature if fewer than t players take part in the signature protocol. In this paper, we proposed a new group-oriented （t, n） threshold signature schemes with traceable signers based on Schnorr signature. The proposed scheme is proved traceable, robust and unforgeable against the ＂static＂ adversary with the discrete logarithm assumption in the random oracle model and existence of broadcast channel. The proofs of the strongest security （existential unforgeability against adaptively chosen message attacks under the discrete logarithm assumption） are provided in the random oracle model.     

A novel <Emphasis Type=Italic>in vitro</Emphasis> angiogenesis model based on a microfluidic device

Angiogenesis is very important for many physiological and pathological processes. However, the molecular mechanisms of angiogenesis are unclear. To elucidate the molecular mechanisms of angiogenesis and to develop treatments for angiogenesis-dependent diseases, it is essential to establish a suitable in vitro angiogenesis model. In this study, we created a novel in vitro angiogenesis model based on a microfluidic device. Our model provides an in vivo-like microenvironment for endothelial cells (ECs) cultures and monitors the response of ECs to changes in their microenvironment in real time. To evaluate the potential of this microfluidic device for researching angiogenesis, the effects of pro-angiogenic factors on ECs proliferation, migration and tube-like structure formation were investigated. Our results showed the proliferation rate of ECs in 3D matrix was significantly promoted by the pro-angiogenic factors (with an increase of 59.12%). With the stimulation of pro-angiogenic factors gradients, ECs directionally migrated into the Matrigel from low concentrations to high concentrations and consequently formed multi-cell chords and tube-like structures. These results suggest that the device can provide a suitable platform for elucidating the mechanisms of angiogenesis and for screening pro-angiogenic or anti-angiogenic drugs for angiogenesis-dependent diseases.     

Periodicity of Retzius lines in fossil <Emphasis Type="Italic">Pongo</Emphasis> from South China

Periodicity of Retzius lines is a key factor in dental development. In this study, we examined the periodicity of Retzius lines in fossil Pongo from South China using polarized light microscope observation of dental ground sections. The periodicities all of the 15 teeth were 9 d. Comparisons of periodicity were made with extant primates, fossil apes and hominins. Periodicity of fossil Pongo from South China was relatively long but fell within the variation of extant Pongo, Gorilla and modern human, and longer than periodicity of Pan and other extant primates. Fossil Pongo from South China was similar to Lufengpithecus and Sivapithecus, shorter than Gigantopithecus and longer than European and African fossil apes and most early hominins in periodicity. Generally, the periodicities of Asian large-body fossil apes were longer than the periodicities of European and African large-body fossil apes in Miocene. Difference among species and trend of evolution in periodicity were analyzed and discussed. We found that periodicity might gradually increase from Proconsul in early Miocene to several fossil apes in Miocene and then Gigantopithecus in Pleistocene. In addition, this study made correlate analysis between periodicity and body mass respectively in males and females of six extant apes and five fossil apes, and found that periodicity positively correlated with body mass.     

Determination of Cd-MT in <Emphasis Type=Italic>Pteria penguin</Emphasis> with indirect non-competitive ELISA

Cadmium-metallothionein (Cd-MT) of Pteria penguin was used to immunize domestic rabbit in order to obtain polyclonal antibody against Cd-MT. Using the anti-Cd-MT antibody, a method of indirect non-competitive enzyme-linked immunosorbent assay (non-competitive ELISA) was established to detect shellfish Cd-MT. In this case, the minimum detectable concentration of P. penguin Cd-MT was (4.563±0.051) ng/mL. The linear range of detection was 9.75-2.0×104 ng/mL. Intra-assay relative standard deviation (RSD) was less than 11.6%, and inter-assay RSD less than 6.7%. The recovery rates ranged from 83.7% to 119.0%. The polyclonal antibody against Cd-MT of P. penguin can also be used to detect MT of other four types of shellfish. In the crude extracts from different organs of P. penguin, the MT concentrations determined by this method matched well with the concentrations of cadmium detected by the atomic absorption spectroscopy.     

First record of Lower Triassic <Emphasis Type="Italic">Undichna</Emphasis> spp. fish swimming traces from Emei,Sichuan Province,China

We discuss traces from the ichnospecies Undichna unisulca recorded from the Triassic that are reported for the first time in this paper. These fossils are also some of the oldest vertebrate ichnites discovered in China to date. The fish swimming traces (Undichna unisulca) described originate from the Lower Triassic. These traces were found in the Jialingjiang Formation and are located at a gorge ~7.5 km from Emei, Sichuan Province, China. The ichnospecies Undichna unisulca consists of a regular sinusoidal wave. The wavelengths and amplitudes are quite constant between each specimen ranging between 28-32 mm and 9-12 mm, respectively. The fish swimming traces and distribution within the same bed are preserved as hypichnial ridges at the undersurface.     

Seasonal variation of gut Cyanophyta contents and liver GST expression of mud carp （Cirrhina molitorella） and Nile tilapia （Oreochromis niloticus） in the tropical Xiangang Reservoir （Huizhou, China）

Liver glutathione S-transferase(GST) plays a major role in the detoxification of microcystins(MCs) via conjugation to glutathione(GSH).We evaluated the relationship between seasonal variation in fish gut contents and the expression of GST isoforms in mud carp(Cirrhina molitorella) and Nile tilapia(Oreochromis niloticus).We quantified the abundance and diversity of plankton in the water column and foregut of mud carp and Nile tilapia in the tropical Xiangang Reservoir between October 2007 and July 2008.The mRNA expression of 7 liver GST isoforms was determined by real-time RT-PCR.The gut contents of both species were dependent on the amount and type of phytoplankton and zooplankton in the water.The expression of liver GST genes in Nile tilapia and mud carp was positively and negatively correlated,respectively,with the abundance of toxic cyanobacteria in the fore-gut.The expression of liver GST mRNA was correlated to the abundance of toxic cyanobacteria in the gut contents of both species,suggesting that mRNA expression of GST isoforms could be used as a biomarker in Nile tilapia and mud carp to monitor cyanobacteria blooms in reservoirs.     

<Emphasis Type=Italic>In vitro</Emphasis> induction of mouse meningeal-derived ips cells into neural-like cells

Previous research has shown that mouse embryonic stem (ES) cells can be induced to form neural cells in adherent monocultures. In this study, pluripotent stem (iPS) C5 cells derived from meningeal membranes were converted successfully into neural-like cells using the same protocol generally used for ES cells. Meningeal-iPS C5 cells were induced to express neural markers Sox1, Sox3, Pax6, Nestin and Tuj1 and to reduce the expression of ES markers Oct4 and Nanog during neural differentiation, and can be differentiated into Pax6 and Nestin positive neural progenitors, and further into neuronal, astrocytic, and oligodendrocytic cells. In vitro differentiation of iPS cells into patient-specific neural cells could serve as a model to study mechanisms of genetic diseases and develop promising candidates for therapeutic applications in dysfunctional or aging neural tissues. Meningeal cells express a high level of the embryonic master regulator Sox2, allowing them to be reprogrammed into iPS cells more easily than other somatic cells.     

Zinc bioleaching from an iron concentrate using <Emphasis Type=Italic>Acidithiobacillus ferrooxidans</Emphasis> strain from Hercules Mine of Coahuila,Mexico

The iron concentrate from Hercules Mine of Coahuila, Mexico, which mainly contained pyrite and pyrrhotite, was treated by the bioleaching process using native strain Acidithiobacillus ferrooxidans (A. ferrooxidans) to determine the ability of these bacteria on the leaching of zinc. The native bacteria were isolated from the iron concentrate of the mine. The bioleaching experiments were carried out in shake flasks to analyze the effects of pH values, pulp density, and the ferrous sulfate concentration on the bioleaching process. The results obtained by microbial kinetic analyses for the evaluation of some aspects of zinc leaching show that the native bacteria A. ferrooxidans, which is enriched with a 9K Silverman medium under the optimum conditions of pH 2.0, 20 g/L pulp density, and 40 g/L FeSO₄, increases the zinc extraction considerably observed by monitoring during15 d, i.e., the zinc concentration has a decrease of about 95% in the iron concentrate.     

Phase transition and thermodynamic properties of BaS: An <Emphasis Type=Italic>Ab initio</Emphasis> study

The hydrostatic-pressure-induced transition phase of BaS from the NaCl-type structure (B1) to the CsCl-type structure (B2) is investigated by ab initio plane-wave pseudopotential den-sity functional theory method. It is found that the transition pres-sure from B1 to B2 phases is 8.2 GPa according to the usual con-dition of equal enthalpy. Through the quasi-harmonic Debye model,the dependences of the relative volume V/V0 on the pres-sure P,the thermal expansion parameter ratio on pressure P,and the Debye temperature Θ and heat capacity CV on pressure P and temperature T are estimated.     

Identification of Zhoukoudian <Emphasis Type=Italic>Homo erectus</Emphasis> brain asymmetry using 3D laser scanning

Endocasts are important materials used for the study of human brain evolution, and allow examination of the external features of brain anatomy from the inside the cranium. Studies examining brain asymmetries in fossil hominids are usually limited to scoring of differences in hemisphere protrusion rostrally and caudally, or to comparing the width of the hemispheres. In the present study, using 3D laser scanning, we examined asymmetries of the hemisphere volumes and surface areas in the Zhoukoudain (ZKD) Homo erectus, dated to 0.4–0.8 Ma. Compared with modern endocasts, we found that the absolute hemisphere volumes and surface areas exhibited no significant asymmetries in the ZKD or in modern specimens. However, the relative hemisphere volumes against surface areas differed between the two groups. When comparing the relative sizes between the left and right hemispheres, the ZKD specimens exhibited a greater variation than in the modern humans; there were no differences in the two hemispheres in the ZKD specimens, while in the modern endocasts the left hemisphere was significantly greater than the right hemisphere. These data suggest that brain asymmetries originated from relative brain sizes rather than absolute brain volumes during human evolution. These anatomical changes are likely related to the origin of human brain lateralization.     

Hydrogen sulfide induced by nitric oxide mediates ethylene-induced stomatal closure of <Emphasis Type=Italic>Arabidopsis thaliana</Emphasis>

Pharmacological, laser scanning confocal microscopic (LSCM), real-time PCR and spectrophotographic approaches are used to study the roles of hydrogen sulfide (H2S) and nitric oxide (NO) in signaling transduction of stomatal movement response to ethylene in Arabidopsis thaliana. In the present study, inhibitors of H2S synthesis were found to block ethylene-induced stomatal closure of Arabidopsis. Treatment with ethylene induced H2S generation and increased L-/D-cysteine desulfhydrase (pyridoxal-phosphate-dep...