支持向量机程序SVMProt预测SArs病毒蛋白质的功能

对SARS冠状病毒蛋白质功能的有效识剐将有利于促进SARS传染病治疗药物的开发。应用基于支持向量机原理的SVMProt程序识别SARS冠状病毒蛋白质的功能,通过对SARS冠状病毒中2个已知功能的蛋白质功能的成功预测,说明SVMProt能够有效地应用于SARS冠状病毒蛋白质及其他种类蛋白质的功能预测。对SARS冠状病毒中至今仍未知其功能的蛋白质ORFl3的功能进行了预测,结果显示ORFl3是一种可能与DNA结合的核蛋白并兼有病毒体内结构蛋白的功能。     

基于生物信息学与分子结构的SARS冠状病毒主蛋白酶(SARS CoV Mpro)多肽类抑制剂研究

用冠状病毒基因解析软件系统ZCURVE_CoY2．0，从SARS冠状病毒（TOR2，NC_004718）的RNA基因序列出发，搜索出含有SARS冠状病毒主蛋白酶（SARS CoV M^pro）真实剪切位点的11个八肽，运用分子叠合和分子对接的方法，对11个八肽进行了分析，证明这11个八肽有相似的活性，而且11个八肽中，op4的活性最高．分析认为，op4有望成为抗SARS药物的理想前体．     

DNA分析技术鉴别乌头初探

该文尝试建立一种利用DNA检验技术鉴别乌头的方法。通过提取50份乌头类及25份其他植物样本的DNA,用荧光特异性引物对乌头ITS2序列进行扩增,产物经3130XL测序仪进行检测分析,并进行测序入库比对。结果发现,试验中所有乌头类植物得到168bp的扩增产物,而其他对照植物均无扩增产物。由此表明,DNA分析技术对于鉴别乌头类与其他植物有一定的参考借鉴价值。     

线粒体连续超薄切片电镜图像的三维可视化

研究建立对连续超薄切片电镜图像的三维可视化方法。对正常及用SARS冠状病毒感染非洲绿猴肾细胞（VeroE6）样品进行连续超薄切片，通过透射电镜得到线粒体断层图像，用表面显示技术对线粒体进行三维重构显示。正常和SARS冠状病毒感染的VetoE6细胞中的线粒体在结构上有明显区别，揭示出SARS冠状病毒感染VeroE6细胞线粒体的病理改变。以此建立起电镜连续超薄切片线粒体图像三维可视化方法。     

葡萄病毒B优化检测体系的建立

为了解决种苗检疫、抗病性早期鉴定等基本问题,为葡萄无毒化栽培的提供基本保障。本实验从感染葡萄病毒B的葡萄皮层中提取总RNA,以其为模板进行一步RT-PCR扩增,并利用此扩增产物为模板进行二次扩增,二者均能获得与预期片段大小一致长约460bp和243bp的扩增产物,在此基础上,建立了萄病毒B的一步RT-PCR、巢式PCR以及斑点杂交优化检测体系。利用本实验所建立的优化检测体系对葡萄样本进行检测,表现出了良好的特异性与稳定性。     

微量植物组织汁液直接RT-LAMP可视化检测马铃薯卷叶病毒方法的构建

为建立快速的马铃薯卷叶病毒检测方法以应用于脱病毒后大规模样本的检测,构建利用微量植物组织汁液直接逆转录环介导恒温扩增(RT-LAMP)可视化检测马铃薯卷叶病毒的方法,即以无菌大头针的针尖刺马铃薯植株茎尖时所粘附的汁液直接作为RNA模板,采用Bacillus stearothermophilus(Bst) DNA聚合酶进行RT-LAMP扩增,扩增产物通过肉眼观察有无白色沉淀来诊断马铃薯卷叶病毒.该方法快速、操作简单、成本低,在大规模组织培养无病毒种薯生产中具有很大的应用空间.     

河北省新乐市羊梨形虫分子检测

为检测河北省新乐市羊梨形虫的感染情况,采集河北省新乐市羊血液样本31份,并提取基因组DNA;根据梨形虫18S rRNA基因序列设计5对特异性引物,以羊血液基因组DNA为模板,对梨形虫进行巢式PCR扩增。结果表明,在31份DNA样本中检测出4份吕氏泰勒虫(12.9%),而尤氏泰勒虫、中华泰勒虫和羊巴贝斯虫均未检测到阳性样本。     

马铃薯卷叶病毒基因组保守序列片段的RT-PCR扩增

从感染马铃薯卷叶病毒的植株中提取马铃薯卷叶病毒总RNA,针对马铃薯卷叶病毒基因组,其中的2个保守序列分别设计并合成了1对寡聚核苷酸引物,用反转录-聚合酶链式反应方法从提取的病毒RNA材料中扩增出符合设计大小的240bp、400bp的特异性产物,对照的健康植株中未扩增出相应产物。     

hTR基因反义表达质粒构建及序列分析

从人的脐带血管内皮细胞中提取基因组 DNA,通过 PCR方法扩增得到了人端粒酶RNA成分 ( human telomere RNA,h TR)的基因片段 ,扩增产物经酶切克隆到逆转录病毒载体p LNCX上 ,构建了 h TR基因的反义表达质粒 .序列分析结果表明 ,PCR扩增得到的 h TR基因的 DNA序列与所发表的序列完全一致 .构建的反义表达载体中的目的基因正确地反向插入到逆转录病毒载体 p LNCX的克隆位点上 ,构成了 h TR基因的反义表达质粒     

DNA短片段复合扩增系统鉴别大麻研究

通过提取大麻及其他对照植物样本的DNA,用荧光标记的特异性引物进行扩增,产物经3500XL测序仪进行检测分析,同时以理化LC-MS/MS分析方法和大麻性别检验法对样本进行检测,与DNA检测结果进行相互印证。结果发现,毒品大麻在93bp与157bp处检测到2条特异性扩增条带,而纤维大麻仅在93bp处检测出1条特异性条带,检测结果与大麻性别检验法得出一致结论,与理化LC-MS/MS分析方法得出的结果有差异。由此可见,该文建立的短片段复合扩增系统对于毒品大麻与纤维大麻的鉴别有一定参考价值。     

Markedness and its Interpretation in Language Use

Language markedness is a common phenomenon in languages, and is reflected from hearing, vision and sense, i.e. the variation in the three aspects such as phonology, morphology and semantics. This paper focuses on the interpretation of markedness in language use following the three perspectives, i.e. pragmatic interpretation, psychological interpretation and cognitive interpretation, with an aim to define the function of markedness.     

Features of Women's language

Language is a means of verbal communication. People use language to communicate with each other. In the society, no two speakers are exactly alike in the way of speaking. Some differences are due to age, gender, statue and personality. Above all, gender is one of the obvious reasons. The writer of this paper tries to describe the features of women＇s language from these perspectives： pronunciation, intonation, diction, subjects, grammar and discourse. From the discussion of the features of women＇s language, more attention should be paid to language use in social context. What＇s more, the linguistic phenomena in a speaking community can be understood more thoroughly.     

An Analysis of Catherine＇s Character——Wuthering Heights

Wuthering Heights, Emily Bronte＇s only novel, was published in December of 1847 under the pseudonym Ellis Bell. The book did not gain immediate success, but it is now thought one of the finest novels in the English language. Catherine is the key character of this masterpiece, because everybody and everything center on her though she had a short life. We can understand this masterpiece better if we know Catherine well.     

Lower Paleozoic oil relationships within Williston Basin, Canada

The Williston Basin is a significant petroleum province, containing oil production zones that include the Middle Cambrian to Lower Ordovician, Upper Ordovician, Middle Devonian, Upper Devonian and Mississippian and within the Jurassic and Cretaceous. The oils of the Williston Basin exhibit a wide range of geochemical characteristics defined as "oil families", although the geochemical signature of the Cambrian Deadwood Formation and Lower Ordovician Winnipeg reservoired oils does not match any "oil family". Despite their close stratigraphic proximity, it is evident that the oils of the Lower Palaeozoic within the Williston Basin are distinct. This suggests the presence of a new "oil family" within the Williston Basin. Diagnostic geochemical signatures occur in the gasoline range chromatograms, within saturate fraction gas chromatograms and biomarker fingerprints. However, some of the established criteria and cross-plots that are currently used to segregate oils into distinct genetic families within the basin do not always meet with success, particularly when applied to the Lower Palaeozoic oils of the Deadwood and Winnipeg Formation.     

低渗透非均质砂岩油藏启动压力梯度研究

理论推导与室内实验相结合,建立了低渗透非均质砂岩油藏启动压力梯度确定方法。首先借助油藏流场与电场相似的原理,推导了非均质砂岩油藏启动压力梯度计算公式。其次基于稳定流实验方法,建立了非均质砂岩油藏启动压力梯度测试方法。结果表明:低渗透非均质砂岩油藏的启动压力梯度确定遵循两个等效原则。平面非均质油藏的启动压力梯度等于各级渗透率段的启动压力梯度关于长度的加权平均;纵向非均质油藏的启动压力梯度等于各渗透率层的启动压力梯度关于渗透率与渗流面积乘积的加权平均。研究成果可用于有效指导低渗透非均质砂岩油藏的合理井距确定,促进该类油藏的高效开发。     

On Tragic Consciousness In The Works By Ernest Hemingway

As an American modern novelist who were famous in the literary world, Hemingway was not a person who always followed the trend but a sharp observer. At the same time, he was a tragedy maestro, he paid great attention on existence, fate and end-result. The dramatis personae's tragedy of his works was an extreme limit by all means tragedy on the meaning of fearless challenge that failed. The beauty of tragedy was not produced on the destruction of life, but now this kind of value was in the impact activity. They performed for the reader about the tragedy on challenging for the limit and the death.     

Achieving Unusual States of Matter Under High Pressure

正The periodicity of the elements and the non-reactivity of the inner-shell electrons are two related principles of chemistry,rooted in the atomic shell structure.Within compounds,Group I elements,for example,invariably assume the+1 oxidation state,and their chemical properties differ completely from those of the p-block elements.These general rules govern our understanding of chemical structures and reactions.Using first principles calcula-     

Exchange-Correlation and Electronic Excitation Energies from Pairing Matrix Fluctuations

We have developed an adiabatic connection to formulate the ground-state exchange-correlation energy in terms of pairing matrix linear fluctuations.This formulation of the exchange-correlation energy opens a new channel for density functional approximations based on the many-body perturbation theory.We illustrate the potential of such approaches with an approximation based on the particle-particle Random Phase Approximation(pp-RPA).This re-     

Density Functional Theory for the Response of Periodic Systems to Electric Fields Based on the Vector Potential Approach

正The electronic and nuclear(structural/vibrational)response of 1D-3D nanoscale systems to electric fields gives rise to a host of optical,mechanical,spectral,etc.properties that are of high theoretical and applied interest.Due to the computational difficulty of treating such large systems it is convenient to model them as infinite and periodic(at least,in first approximation).The fundamental theoretical/computational problem in doing so is that     

Call for Papers

<正>"The Journal of Shanghai Normal University:Mathematics"is published by Shanghai Normal University as regular issues of The Journal of Shanghai Normal University each year from 2014 in English.The editors-in-chief of the issues are professors Yuhao Cong and Maoan Han.The Journal of Shanghai Normal University was started in 1958 with