利用多重荧光定量PCR方法检测线粒体DNA拷贝数

为准确快速地检测出线粒体DNA拷贝数,建立新型多重荧光定量PCR(polymerase chain reaction)方案。该方案以高拷贝基因(300拷贝)替代以往单拷贝基因作为内参,减小线粒体拷贝数与内参基因拷贝数差异,同时,该方案在单管中检测线粒体和内参基因的拷贝数,消除了在不同管中检测内参基因和目的基因时的孔间差。此外考察了不同DNA抽提方法对线粒体DNA拷贝数检测结果的影响,并且构建质粒标准品(含有内参基因和线粒体DNA区段)。采用该方案检测100例中国人外周血样本线粒体DNA拷贝数,发现线粒体DNA拷贝数与年龄呈现负相关。该新型多重荧光定量PCR方案适用于大规模人群中线粒体DNA拷贝数的检测。     

检测微囊藻毒素合成酶基凶mcyH的SYBR Green Ⅰ实时荧光定量RT—PCR方法的建立

利用RT—PCR方法从铜绿微囊藻PCC7806 mcy基因中扩增出目的基因片段，用TA克隆方法将基因片段插入pGEMT—T Easy中来制备质粒标准品．通过不同连续稀释倍数的质粒标准品成功构建了16srRNA和mcyH两基因的标准曲线，该法构建的两基因标准曲线r^2分别为0．9916和0．9938，且质粒标准品具有较好的重复性，满足实时荧光定量RT—PCR的要求．     

杂交法检测重组乙型肝炎疫苗（汉逊酵母）发酵产物HBsAg外源基因拷贝数

以汉逊酵母宿主基因组DNA和发酵产物基因组DNA的相同MOX启动子的片断为特异性探针,用地高辛标记后,与固定在杂交膜上的宿主基因组DNA和发酵产物基因组DNA进行杂交并显色,根据显色深度来判定发酵产物中外源基因拷贝数的大小。结果表明,发酵产物中HBsAg外源基因拷贝数不小于30个。该方法检测灵敏度较好,特异性较强,操作较安全,可用于重组汉逊酵母发酵产物中HBsAg外源基因拷贝数定性检测。     

Quantification of microcystin synthetase gene mcyH using real-time quantitative RT-PCR with SYBR green Ⅰ

利用RT-PCR方法从铜绿微囊藻PCC7806 mcy基因中扩增出目的基因片段,用TA克隆方法将基因片段插入pGEMT-T Easy中来制备质粒标准品.通过不同连续稀释倍数的质粒标准品成功构建了16srRNA和mcyH两基因的标准曲线,该法构建的两基因标准曲线r2分别为0.9916和0.9938,且质粒标准品具有较好的重复性,满足实时荧光定量RT-PCR的要求.     

实时荧光定量PCR检测多鳍鱼Shh基因表达标准品质粒和标准曲线的构建

为了快速、准确定量多鳍鱼Shh基因在机体组织中的表达水平,根据笔者克隆的Shh基因序列,选择其高度保守区域设计一对引物,对多鳍鱼各组织提取mRNA,经RT-PCR扩增,产物纯化后与pGEM-T-easy连接,转化大肠杆菌DH5α。筛选后得到重组标准品质粒,对重组标准品质粒进行酶切、PCR和测序鉴定,表明Shh基因保守区段已经成功克隆。将重组标准品质粒进行倍比稀释,然后以此为模板,进行荧光定量PCR,系统自动分析软件显示Ct值与标准品浓度的对数之间存在良好的线性关系。回归方程为y=-0.32x 10.47,回归系数为1.00。构建Shh基因表达检测标准品质粒和标准曲线,建立检测多鳍鱼Shh基因荧光定量PCR方法,为进一步研究Shh基因在组织中的动态分布和研究多鳍鱼系统发育奠定了基础。     

人GABRA1实时荧光定量TaqMan PCR检测方法的建立

根据GenBank上人GABRA1基因的序列,设计并合成特异性的引物及探针,采用TaqMan探针法建立了荧光定量PCR法,以常规PCR产物为标准品,建立标准曲线．结果表明,标准曲线Ct值检测范围为12．07-32．72,相关系数为0．999,扩增效率为96．4%.建立的GABRA1TaqMan探针实时荧光定量方法具有线性范围广、扩增效率高、检测时间短、敏感性高等特点．     

回归方程在转基因水稻Bt基因定量检测中引入的不确定度评估

为了把测试分析误差控制在允许范围内,保证测试结果有一定的精密度和准确度,使分析数据在给定的置信水平内达到要求的质量,根据JJFl059.1999《测量不确定度评定与表示》技术规范,采用抗虫转Bt基因水稻定量PCR方法,测试"科丰6号"样品Bt基因的含量,初步评估了内标基因GOX和外源基因Bt的校准曲线输出值的不确定度.检测结果平均值为5.3%,接近约定真值;回归方程在转基因水稻Bt基因定量检测中引入的不确定度评估结果为0.027.Ct值的随机变化和标准曲线的非线性是回归方程引入的不确定度的主要因素,因此,在转基因生物安全定量结果不确定度评定中,应重点讨论Ct值变化与标准曲线非线性的偏离.     

废水处理功能菌株FA-2的实时荧光定量PCR检测

FA-2是油脂化工废水处理系统中分离到的降解脂肪酸和脂肪胺的功能菌.本研究以大肠杆菌为参照菌,基于荧光定量PCR技术,建立了检测FA-2相对含量的荧光定量PCR方法.根据FA-2已知特异序列GENE2和大肠杆菌16 s rRNA基因序列GENE1分别设计合成特异引物和Tagman探针,采用实时荧光定量PCR技术分别检测各样本FA-2和E.coli 16 s rRNA基因的相对拷贝数,获得了FA-2及大肠杆菌的标准曲线.并比较这两种基因剂量之比例和混和的菌数比例之间的关系.结果表明混合菌液中FA-2的含量与CtGENE2与CtGENE1的差值ΔCt呈线性关系,由此可以推算出模板DNA的数量及对应的细菌数量.荧光定量检测结果与直接计数结果基本一致.该方法的建立,为进一步在废水处理系统中应用FQ-CR检测功能菌的含量打下基础.     

TMEM43基因SYBR Green Ⅰ实时荧光定量PCR检测方法的建立及应用

根据Genbank中登录的TMEM43基因序列设计并合成引物,建立了TMEM43SYBR Green Ⅰ real-time PCR方法.利用该方法构建标准曲线,并对灵敏性及重复性进行验证.最后对随机选取的几种人源细胞及不同物种细胞进行检测.结果显示,建立的TMEM43SYBR Green Ⅰ real-time PCR方法线性关系好,以标准品构建的标准曲线相关系数R2=1;灵敏性比普通PCR高10倍,能成功检出不同细胞中TMEM43表达量.表明建立的TMEM43SYBR Green Ⅰ real-time PCR检测方法可用于TMEM43基因表达的检测及定量分析,可为临床TMEM43相关疾病的检测及分析提供实验依据.     

衣藻的核基因组转化及外源基因转录分析

通过珠磨法将衣藻表达载体pSP108转入到莱茵衣藻细胞壁缺陷型CC-400藻株中,经抗性筛选及PCR鉴定,获得了24个转化藻株.在抗性基因ble编码序列的中间部位和末端部位分别设计两对不同的探针引物,运用实时荧光定量PCR对转基因藻株进行外源基因转录水平的分析.结果发现:不同转化藻株外源基因的转录水平有明显差异;同一转化藻株两对探针引物,外源基因的转录水平也存在差异.说明莱茵衣藻在转化过程中,外源基因整合到基因组上的片段数量及片段长度和完整性具有不确定性.     

Markedness and its Interpretation in Language Use

Language markedness is a common phenomenon in languages, and is reflected from hearing, vision and sense, i.e. the variation in the three aspects such as phonology, morphology and semantics. This paper focuses on the interpretation of markedness in language use following the three perspectives, i.e. pragmatic interpretation, psychological interpretation and cognitive interpretation, with an aim to define the function of markedness.     

Features of Women's language

Language is a means of verbal communication. People use language to communicate with each other. In the society, no two speakers are exactly alike in the way of speaking. Some differences are due to age, gender, statue and personality. Above all, gender is one of the obvious reasons. The writer of this paper tries to describe the features of women＇s language from these perspectives： pronunciation, intonation, diction, subjects, grammar and discourse. From the discussion of the features of women＇s language, more attention should be paid to language use in social context. What＇s more, the linguistic phenomena in a speaking community can be understood more thoroughly.     

低渗透非均质砂岩油藏启动压力梯度研究

理论推导与室内实验相结合,建立了低渗透非均质砂岩油藏启动压力梯度确定方法。首先借助油藏流场与电场相似的原理,推导了非均质砂岩油藏启动压力梯度计算公式。其次基于稳定流实验方法,建立了非均质砂岩油藏启动压力梯度测试方法。结果表明:低渗透非均质砂岩油藏的启动压力梯度确定遵循两个等效原则。平面非均质油藏的启动压力梯度等于各级渗透率段的启动压力梯度关于长度的加权平均;纵向非均质油藏的启动压力梯度等于各渗透率层的启动压力梯度关于渗透率与渗流面积乘积的加权平均。研究成果可用于有效指导低渗透非均质砂岩油藏的合理井距确定,促进该类油藏的高效开发。     

On Tragic Consciousness In The Works By Ernest Hemingway

As an American modern novelist who were famous in the literary world, Hemingway was not a person who always followed the trend but a sharp observer. At the same time, he was a tragedy maestro, he paid great attention on existence, fate and end-result. The dramatis personae's tragedy of his works was an extreme limit by all means tragedy on the meaning of fearless challenge that failed. The beauty of tragedy was not produced on the destruction of life, but now this kind of value was in the impact activity. They performed for the reader about the tragedy on challenging for the limit and the death.     

Achieving Unusual States of Matter Under High Pressure

正The periodicity of the elements and the non-reactivity of the inner-shell electrons are two related principles of chemistry,rooted in the atomic shell structure.Within compounds,Group I elements,for example,invariably assume the+1 oxidation state,and their chemical properties differ completely from those of the p-block elements.These general rules govern our understanding of chemical structures and reactions.Using first principles calcula-     

Exchange-Correlation and Electronic Excitation Energies from Pairing Matrix Fluctuations

We have developed an adiabatic connection to formulate the ground-state exchange-correlation energy in terms of pairing matrix linear fluctuations.This formulation of the exchange-correlation energy opens a new channel for density functional approximations based on the many-body perturbation theory.We illustrate the potential of such approaches with an approximation based on the particle-particle Random Phase Approximation(pp-RPA).This re-     

Density Functional Theory for the Response of Periodic Systems to Electric Fields Based on the Vector Potential Approach

正The electronic and nuclear(structural/vibrational)response of 1D-3D nanoscale systems to electric fields gives rise to a host of optical,mechanical,spectral,etc.properties that are of high theoretical and applied interest.Due to the computational difficulty of treating such large systems it is convenient to model them as infinite and periodic(at least,in first approximation).The fundamental theoretical/computational problem in doing so is that     

On the Thermodynamic Limit for Responses to Static Electromagnetic Fields

For molecular systems,the quantum-mechanical treatment of their responses to static electromagnetic fields usually employs a scalar-potential treatment of the electric field and a vector-potential treatment of the magnetic field.Although the potential for each field separately is associated with the choice of an(unphysical)origin,the precise choice of the origin for the electrostatic field has little consequences for the results.This is different for the     

Call for Papers

<正>"The Journal of Shanghai Normal University:Mathematics"is published by Shanghai Normal University as regular issues of The Journal of Shanghai Normal University each year from 2014 in English.The editors-in-chief of the issues are professors Yuhao Cong and Maoan Han.The Journal of Shanghai Normal University was started in 1958 with     

Journal of Donghua University ( English Edition) Contents of Volume 31

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