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RT—PCR检测草鱼呼肠孤病毒的方法研究
引用本文:郝贵杰,盛鹏程,林锋,潘晓艺,徐洋,姚嘉赟,尹文林,曹铮,袁雪梅,蔺凌云,沈锦玉.RT—PCR检测草鱼呼肠孤病毒的方法研究[J].集美大学学报(自然科学版),2013(1):8-13.
作者姓名:郝贵杰  盛鹏程  林锋  潘晓艺  徐洋  姚嘉赟  尹文林  曹铮  袁雪梅  蔺凌云  沈锦玉
作者单位:浙江省淡水水产研究所;宁波大学海洋学院
基金项目:农业部公益性行业(农业)科研专项(200803013);浙江省科技厅重点项目(2007C22052);湖州市科技攻关计划项目(2011GG11);湖州市自然科学基金项目(2012YZ03);宁波大学中央财政支持地方高校发展专项学科项目(xkc11010)
摘    要:草鱼呼肠孤病毒(Grass carp reovirus,GCRV)为草鱼出血病的病原.本实验根据GenBank中GCRV和其他水生呼肠孤病毒毒株的第六基因片段,在其保守区设计了一对GCRV特异性引物,建立了快速检测GCRV的逆转录聚合酶链式反应(RT—PCR)方法.该PCR体系中,上下游引物的最适终浓度为120nmol/L,最适退火温度为52℃.PCR特异性试验表明:所设计的引物只能扩增GCRV的核酸,而不能扩增嗜水气单胞菌BSK-10、WSSV以及正常CIK细胞的DNA或RNA.敏感性试验表明,当GCRV的反转录模板稀释至5-7时,PCR结果还为阳性.用所建立的RT—PCR方法对5份样品进行检测,结果表明本研究建立的RT—PCR检测方法可靠且可行.

关 键 词:GCRV  草鱼肾细胞系  逆转录聚合酶链式反应  细胞病变效应  快速诊断

Development and Application of RT-PCR Technique for Detecting Grass Carp Reovirus(GCRV) Infection
HAO Gui-jie,SHENG Peng-cheng,LIN Feng,PAN Xiao-yi,XU Yang,YAO Jia-yun,YIN Wen-lin,CAO Zheng,YUAN Xue-mei,LIN Ling-yun,SHEN Jin-yu.Development and Application of RT-PCR Technique for Detecting Grass Carp Reovirus(GCRV) Infection[J].the Editorial Board of Jimei University(Natural Science),2013(1):8-13.
Authors:HAO Gui-jie  SHENG Peng-cheng  LIN Feng  PAN Xiao-yi  XU Yang  YAO Jia-yun  YIN Wen-lin  CAO Zheng  YUAN Xue-mei  LIN Ling-yun  SHEN Jin-yu
Institution:1(1.Zhejiang Institute of Freshwater Fisheries,Huzhou 313001,China; 2.College of Marine,Ningbo University,Ningbo 315211,China)
Abstract:Grass carp reovirus (GCRV) is an important pathogenic virus, which can cause outbreak of grass carp hemorrhage in China freshwater region. A pair of specific primers was designed to amplify partial segment (about 440bp) of the sixth gene according to the sixth gene sequence of GCRV and other Aquareoviruses strains in GenBank. The reaction conditions of the RT - PCR were optimized and the optimum primers concentration was 120nmol/L of each and the optimum annealing temperature was 52℃. The primer specificity was evaluated and the results showed that the expected 440bp fragment could be amplified only from GCRV but not from Aeromonas hydrophila BSK - 10, WSSV, or uninfected CIK cells. The result of sensitivity showed that the positive 440 fragment could be amplified from the cDNA template even if the template diluted to 5 -7 times. Five samples of visceral organs of the moribund grass carp with hemorrhage symptom were detected using the RT-PCR method developed above, and the results showed that it was a useful method for detecting the pathogen of GCRV in diagnosis practice.
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