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The DNA sequence of the human X chromosome
Authors:Ross Mark T  Grafham Darren V  Coffey Alison J  Scherer Steven  McLay Kirsten  Muzny Donna  Platzer Matthias  Howell Gareth R  Burrows Christine  Bird Christine P  Frankish Adam  Lovell Frances L  Howe Kevin L  Ashurst Jennifer L  Fulton Robert S  Sudbrak Ralf  Wen Gaiping  Jones Matthew C  Hurles Matthew E  Andrews T Daniel  Scott Carol E  Searle Stephen  Ramser Juliane  Whittaker Adam  Deadman Rebecca  Carter Nigel P  Hunt Sarah E  Chen Rui  Cree Andrew  Gunaratne Preethi  Havlak Paul  Hodgson Anne  Metzker Michael L  Richards Stephen  Scott Graham  Steffen David  Sodergren Erica  Wheeler David A  Worley Kim C  Ainscough Rachael
Institution:The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK. mtr@sanger.ac.uk
Abstract:The human X chromosome has a unique biology that was shaped by its evolution as the sex chromosome shared by males and females. We have determined 99.3% of the euchromatic sequence of the X chromosome. Our analysis illustrates the autosomal origin of the mammalian sex chromosomes, the stepwise process that led to the progressive loss of recombination between X and Y, and the extent of subsequent degradation of the Y chromosome. LINE1 repeat elements cover one-third of the X chromosome, with a distribution that is consistent with their proposed role as way stations in the process of X-chromosome inactivation. We found 1,098 genes in the sequence, of which 99 encode proteins expressed in testis and in various tumour types. A disproportionately high number of mendelian diseases are documented for the X chromosome. Of this number, 168 have been explained by mutations in 113 X-linked genes, which in many cases were characterized with the aid of the DNA sequence.
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