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Meta-analysis identifies nine new loci associated with rheumatoid arthritis in the Japanese population
Authors:Okada Yukinori  Terao Chikashi  Ikari Katsunori  Kochi Yuta  Ohmura Koichiro  Suzuki Akari  Kawaguchi Takahisa  Stahl Eli A  Kurreeman Fina A S  Nishida Nao  Ohmiya Hiroko  Myouzen Keiko  Takahashi Meiko  Sawada Tetsuji  Nishioka Yuichi  Yukioka Masao  Matsubara Tsukasa  Wakitani Shigeyuki  Teshima Ryota  Tohma Shigeto  Takasugi Kiyoshi  Shimada Kota  Murasawa Akira  Honjo Shigeru  Matsuo Keitaro  Tanaka Hideo  Tajima Kazuo  Suzuki Taku  Iwamoto Takuji  Kawamura Yoshiya  Tanii Hisashi  Okazaki Yuji  Sasaki Tsukasa  Gregersen Peter K  Padyukov Leonid  Worthington Jane  Siminovitch Katherine A  Lathrop Mark  Taniguchi Atsuo
Institution:Laboratory for Autoimmune Diseases, Center for Genomic Medicine, RIKEN, Yokohama, Japan.
Abstract:Rheumatoid arthritis is a common autoimmune disease characterized by chronic inflammation. We report a meta-analysis of genome-wide association studies (GWAS) in a Japanese population including 4,074 individuals with rheumatoid arthritis (cases) and 16,891 controls, followed by a replication in 5,277 rheumatoid arthritis cases and 21,684 controls. Our study identified nine loci newly associated with rheumatoid arthritis at a threshold of P < 5.0 × 10(-8), including B3GNT2, ANXA3, CSF2, CD83, NFKBIE, ARID5B, PDE2A-ARAP1, PLD4 and PTPN2. ANXA3 was also associated with susceptibility to systemic lupus erythematosus (P = 0.0040), and B3GNT2 and ARID5B were associated with Graves' disease (P = 3.5 × 10(-4) and 2.9 × 10(-4), respectively). We conducted a multi-ancestry comparative analysis with a previous meta-analysis in individuals of European descent (5,539 rheumatoid arthritis cases and 20,169 controls). This provided evidence of shared genetic risks of rheumatoid arthritis between the populations.
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