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基于迁徙策略的PSO集成及其在序列模体识别中的应用
引用本文:王铁奇,邱德华,胡桂武.基于迁徙策略的PSO集成及其在序列模体识别中的应用[J].衡阳师专学报,2008(3):21-25.
作者姓名:王铁奇  邱德华  胡桂武
作者单位:广东商学院数学与计算科学系,广东广州510320
基金项目:广东省自然科学基金资助项目(06301003)
摘    要:对优化问题和游牧民族迁徙行为的比较研究表明,两者存在相似之处,文中模拟了游牧民族迁徙机制,提出了一种迁徙策略,并且与粒子群优化算法相结合,提高了算法摆脱局部极值的能力,通过集成技术,充分发挥各种粒子群优化算法的优点,实现协同演化,提高了算法的全局搜索能力。最后应用于求解计算分子生物学中的一个复杂问题——生物序列模体识别,实验表明,该算法是有效的。

关 键 词:迁徙策略  模体识别  计算分子生物学  粒子群优化算法  协同演化

Migration Particle Swarm Optimization Ensemble and its Application for Motif Detection
WANG Tie-qi,QIU De-hua,HU Gui-wu.Migration Particle Swarm Optimization Ensemble and its Application for Motif Detection[J].Journal of Hengyang Normal University,2008(3):21-25.
Authors:WANG Tie-qi  QIU De-hua  HU Gui-wu
Institution:(Department of Mathematics and Computational Science, Guangdong University of Business Studies, Guangzhou 510320, China)
Abstract:A comparative study of optimization and nomadic migration shows that there are similarities between the two processes. In this paper, migration strategy is proposed by the simulation of nomadic migration, and the local extremum problem of particle swarm optimization has been solved by merging migration strategy. At the same time, the algorithm with ensemble technique not only sufficiently exerts the advantages of different particle swarm optimization and carries out harmonious evolution, but also the global search capability of the algorithm has been enhanced badly. Finally, the novel algorithm has been used to deal with biological Sequence motif detection, which is a complex problem in computational molecular biology and the experiments show that the algorithm is effective.
Keywords:migration strategy  motif detection  computational molecular biology  particle swarm optimization  harmonious evolution
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