Developmental genes as a potential tool in population ecology of complex animal life cycles?

Many aquatic invertebrates possess complex life cycles, which include a switch from a vegetative to a sexual mode of reproduction. While sexual reproduction is usually linked to slow rates of propagation, vegetative reproduction leads to high rates of clonal propagation and a fast increase in population size. I have attempted to identify developmental genes which are differentially expressed between sexually and vegetatively reproducing individuals. Quantitative assays of the expression of those diagnostic genes could be applied to field samples to gain information on the reproductive status of the sample. Here I outline a general strategy for identifying and testing the usefulness of homeobox genes as candidates for regulatory genes whose expression patterns are indicative of a sexual or vegetative developmental phase.