MYH9 is associated with nondiabetic end-stage renal disease in African Americans

As end-stage renal disease (ESRD) has a four times higher incidence in African Americans compared to European Americans, we hypothesized that susceptibility alleles for ESRD have a higher frequency in the West African than the European gene pool. We carried out a genome-wide admixture scan in 1,372 ESRD cases and 806 controls and found a highly significant association between excess African ancestry and nondiabetic ESRD (lod score = 5.70) but not diabetic ESRD (lod = 0.47) on chromosome 22q12. Each copy of the European ancestral allele conferred a relative risk of 0.50 (95% CI = 0.39-0.63) compared to African ancestry. Multiple common SNPs (allele frequencies ranging from 0.2 to 0.6) in the gene encoding nonmuscle myosin heavy chain type II isoform A (MYH9) were associated with two to four times greater risk of nondiabetic ESRD and accounted for a large proportion of the excess risk of ESRD observed in African compared to European Americans.     

Pygmy rabbits in the Colorado River drainage

Normal 0 false false false EN-US X-NONE X-NONE MicrosoftInternetExplorer4 st1\:*{behavior:url(#ieooui) } /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Table Normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-priority:99; mso-style-qformat:yes; mso-style-parent:""; mso-padding-alt:0in 5.4pt 0in 5.4pt; mso-para-margin:0in; mso-para-margin-bottom:.0001pt; mso-pagination:widow-orphan; font-size:11.0pt; font-family:"Calibri","sans-serif"; mso-ascii-font-family:Calibri; mso-ascii-theme-font:minor-latin; mso-fareast-font-family:"Times New Roman"; mso-fareast-theme-font:minor-fareast; mso-hansi-font-family:Calibri; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:"Times New Roman"; mso-bidi-theme-font:minor-bidi;} A range extension of the pygmy rabbit, Brachylagus idahoensis, into the Colorado River basin and a hypothesis as to its route of emigration.     

A new sceloporine lizard from Oaxaca, Mexico

Sceloporus megalepidurus halli, subsp. nov., is described from San José Lachiguiri, Oaxaca, Mexico, from one adult male.     

Common variants at 12q14 and 12q24 are associated with hippocampal volume

Aging is associated with reductions in hippocampal volume that are accelerated by Alzheimer's disease and vascular risk factors. Our genome-wide association study (GWAS) of dementia-free persons (n = 9,232) identified 46 SNPs at four loci with P values of <4.0 × 10(-7). In two additional samples (n = 2,318), associations were replicated at 12q14 within MSRB3-WIF1 (discovery and replication; rs17178006; P = 5.3 × 10(-11)) and at 12q24 near HRK-FBXW8 (rs7294919; P = 2.9 × 10(-11)). Remaining associations included one SNP at 2q24 within DPP4 (rs6741949; P = 2.9 × 10(-7)) and nine SNPs at 9p33 within ASTN2 (rs7852872; P = 1.0 × 10(-7)); along with the chromosome 12 associations, these loci were also associated with hippocampal volume (P < 0.05) in a third younger, more heterogeneous sample (n = 7,794). The SNP in ASTN2 also showed suggestive association with decline in cognition in a largely independent sample (n = 1,563). These associations implicate genes related to apoptosis (HRK), development (WIF1), oxidative stress (MSR3B), ubiquitination (FBXW8) and neuronal migration (ASTN2), as well as enzymes targeted by new diabetes medications (DPP4), indicating new genetic influences on hippocampal size and possibly the risk of cognitive decline and dementia.     

A radiation hybrid map of the rat genome containing 5,255 markers.

A whole-genome radiation hybrid (RH) panel was used to construct a high-resolution map of the rat genome based on microsatellite and gene markers. These include 3,019 new microsatellite markers described here for the first time and 1,714 microsatellite markers with known genetic locations, allowing comparison and integration of maps from different sources. A robust RH framework map containing 1,030 positions ordered with odds of at least 1,000:1 has been defined as a tool for mapping these markers, and for future RH mapping in the rat. More than 500 genes which have been mapped in mouse and/or human were localized with respect to the rat RH framework, allowing the construction of detailed rat-mouse and rat-human comparative maps and illustrating the power of the RH approach for comparative mapping.     

Courtship behavior in Rhinoclemmys areolata from western Tabasco, Mexico (Testudines: Emydidae)

Observations in nature and captivity reveal that members of the population of Rhinoclemmys areolata of western Tabasco, Mexico, exhibit underwater courtship and mating and appear to lay one egg per nest.     

Gray Partridge foraging ecology in eastern South Dakota

We examined crop contents of 217 Gray Partridge ( Perdix perdix ) collected during a two-year period in eastern South Dakota. Row crop grains (corn, sunflowers) dominated late fall, winter, and spring diets. Small grains (oats, barley, wheat, rye) were rarely consumed although fields of small grains were widely available. During a severe winter when waste row crop grains were buried by snow, partridge consumed more leafy vegetation. Insects dominated the early summer diet, while foxtail ( Setaria spp.) seeds were a major late summer and early fall food.     

Diversification within the Mexican vole ( Microtus mexicanus ) and the role of post-Pleistocene climate change

Normal 0 false false false MicrosoftInternetExplorer4 st1\:*{behavior:url(#ieooui) } /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Table Normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-parent:""; mso-padding-alt:0in 5.4pt 0in 5.4pt; mso-para-margin:0in; mso-para-margin-bottom:.0001pt; mso-pagination:widow-orphan; font-size:10.0pt; font-family:"Times New Roman"; mso-ansi-language:#0400; mso-fareast-language:#0400; mso-bidi-language:#0400;} To examine the partitioning of genetic variation within the Mexican vole ( Microtus mexicanus ), we analyzed variation within the cytochrome b (cyt b, ca. 953 bp) from 44 samples of the Mexican vole from the mountains of the southwestern United States and Mexico. Phylogeographic analyses demonstrated strong support for a western clade and an eastern clade, corresponding to the Sierra Madre Occidental and mountains of the southwestern United States (western clade) and the Sierra Madre Oriental and the Sierra Madre del Sur (eastern clade). Levels of genetic distinctiveness among vole populations in Mexico and the southwestern United States support recognition of the Mogollon vole ( Microtus mogollonensis ). Estimates of lineage divergence suggested an older divergence for populations in Mexico and a more recent divergence for the presumptive M. mogollonensis. Ecological analyses demonstrated a distinct climate niche between vole lineages in the Southwest and Mexico, which indicated the possible role of environmental variation in diversification of the Mexican vole. A similar pattern of climatic separation was also demonstrated between clades of the codistributed taxa Sigmodon hispidus, Neotoma mexicana, and Peromyscus truei, suggesting a broader role for climatic variation in the origin and maintenance of the region&rsquo;s biodiversity. Para examinar la distribuci&oacute;n de la variaci&oacute;n gen&eacute;tica en el metorito mexicano, analizamos la variaci&oacute;n en el citocromo b (cyt b, c. 953 pb ) en 44 muestras del metorito mexicano de las monta&ntilde;as de M&eacute;xico y del suroeste de Estados Unidos. Los an&aacute;lisis filogeogr&aacute;ficos demostraron fuerte apoyo para un clado occidental y un clado oriental, correspondientes a la Sierra Madre Occidental y las monta&ntilde;as del suroeste de Estados Unidos (oeste) y la Sierra Madre Oriental y la Sierra Madre del Sur (este). Los niveles de diferencia gen&eacute;tica entre las poblaciones de metoritos en M&eacute;xico y las del sur de Estados Unidos apoyan el reconocimiento del metorito Mogollon ( Microtus mogollonensis ) como especie. Las estimaciones de divergencia entre linajes indican una divergencia m&aacute;s remota para las poblaciones en M&eacute;xico y una m&aacute;s reciente para el presunto M. mogollonensis. Los an&aacute;lisis ecol&oacute;gicos demuestran nichos clim&aacute;ticos distintos entre los linajes de metorito en el suroeste de Estados Unidos y en M&eacute;xico, lo cual indica el posible papel de la variaci&oacute;n ambiental en la diversificaci&oacute;n del metorito mexicano. Un patr&oacute;n similar de separaci&oacute;n clim&aacute;tica fue tambi&eacute;n demostrado entre clados de los taxones codistribuidos: Sigmodon hispidus, Neotoma mexicana y Peromysus truei, sugiriendo que la variaci&oacute;n clim&aacute;tica tiene un mayor papel en el origen y el mantenimiento de la biodiversidad de la regi&oacute;n.     

Induction and organization of Ca2+ waves by enteric neural reflexes.

The motility of the gastrointestinal tract consists of local, non-propulsive mixing (pendular or segmental) and propulsive (peristaltic) movements. It is generally considered that mixing movements are produced by intrinsic pacemakers which generate rhythmic contractions, and peristalsis by intrinsic excitatory and inhibitory neural reflex pathways, but the relationship between mixing and peristalsis is poorly understood. Peristalsis is compromised in mice lacking interstitial cells of Cajal, suggesting that these pacemaker cells may also be involved in neural reflexes. Here we show that mixing movements within longitudinal muscle result from spontaneously generated waves of elevated internal calcium concentration which originate from discrete locations (pacing sites), spread with anisotropic conduction velocities in al directions, and terminate by colliding with each other or with adjacent neurally suppressed regions. Excitatory neural reflexes control the spread of excitability by inducing new pacing sites and enhancing the overall frequency of pacing, whereas inhibitory reflexes suppress the ability of calcium waves to propagate. We provide evidence that the enteric nervous system organizes mixing movements to generate peristalsis, linking the neural regulation of pacemakers to both types of gut motility.