GST-Jab1融合蛋白表达载体的构建及表达纯化

目的获取GST-Jab1蛋白,进一步研究Jab1的功能。方法以pMSCVneo-Jab1为模板,PCR扩增Jab1 DNA片断,EcoRI和XhoI双酶切后克隆至pGEX-5X-1表达载体,测序验证。将正确重组的pGEX-5X-1-Jab1表达质粒转化E.coli BL21,IPTG诱导后,超声破碎细胞,用GST琼脂糖珠对上述表达产物进行纯化,SDS-PAGE、Western Blot分析和鉴定诱导表达和纯化的GST-Jab1蛋白质。结果成功构建了pGEX-5X-1-Jab1重组表达载体,SDS-PAGE分析结果显示表达和纯化的蛋白质与融合蛋白GST-Jab1预期分子量一致,Western Blot鉴定结果证实纯化的蛋白质为GST-Jab1。结论成功地表达、纯化了GST-Jab1融合蛋白。     

δ-氨基-γ-酮戊酸合成酶(ALAS)基因的克隆与原核表达

为获得ALAS的重组表达蛋白,以人肝脏组织cDNA为模板,通过PCR扩增得到ALAS全长片段并测序,成功构建了pET30a(+)-ALAS融合表达载体并转化大肠杆菌Rosetta(DE).IPTG诱导融合蛋白表达.SDS变性凝胶电泳结果显示,融合蛋白的分子量约70kDa,并且在上清液中有少量表达.经镍柱一步纯化得到His6-ALAS融合蛋白.     

Myostatin基因原核表达载体的构建及蛋白表达、纯化与鉴定

应用基因工程技术,将合成Myostatin C-末端区(330bp)的基因序列,克隆至原核表达载体pQE30,以构建人的Myostatin基因原核表达载体.构建的重组质粒pQE-Ms转染大肠杆菌宿主菌DH5α后,IPTG诱导表达重组蛋白.应用SDS-PAGE电泳和Western Blot分析和鉴定了重组蛋白的特异性,并用镍离子亲和色谱柱层析进行目的蛋白的纯化与鉴定.结果表明:重组质粒pQE-Ms酶切和测序结果与预期相符,SDS-PAGE电泳和Western Blot证实表达蛋白为目的蛋白,蛋白表达形式为包涵体,经镍离子螯合亲和层析柱纯化及鉴定,确定实验获得了高纯度的目的蛋白,为人体血清中Myostatin蛋白表达的检测及特异性抗体制备等研究提供了实验依据.     

NF-κB相互作用多肽原核表达载体的构建、表达与纯化

为了获得高纯度的可溶性NF-κB相互作用多肽,首先以酵母双杂交技术筛选获得的NF-κB相互作用多肽的酵母表达质粒pGAD GH/pp10为模板,扩增多肽基因片段,后经BglⅡ,StuⅠ双酶切后连接到pET-42a(+)载体中,构建GST/多肽融合蛋白的原核表达载体,并将GST/多肽融合蛋白的原核表达载体转化入BL-21菌株,用0.4 mmol/L IPTG于30 ℃诱导表达4 h,后经GST亲和纯化GST/多肽融合蛋白,SDS-PAGE电泳鉴定融合蛋白的表达和纯度.实验结果表明,成功地构建了NF-κB相互作用多肽的GST/多肽融合蛋白原核表达载体,进行了GST/多肽融合蛋白的诱导表达,融合蛋白的表达为可溶性表达,最终纯化获得纯度约为80%的可溶性GST/多肽融合蛋白,这将为后继利用GST pull-down,Bio-sensor,EMSA等实验进一步验证NF-κB相互作用多肽的功能提供可靠的材料来源奠定基础.     

鱼腥藻铁吸收调节蛋白基因(alr0957)的克隆和表达

依据CyanoBase提供的鱼腥藻PCC7120 furC基因(alr0957)的序列信息设计了一对特异性引物,用Touch-down PCR的方法从基因组DNA中扩增得到大小约450bp的目的片段.通过TA克隆的方法将该片段连接到pMD18-T载体上筛选出重组质粒pMD18-T-fur,然后进行双酶切,纯化furC基因,再连接到原核表达载体pET-28a(+)上,转化表达菌株BL21(DE3).经PCR、双酶切和测序鉴定,对阳性菌株进行IPTG诱导表达,SDS-PAGE检测重组蛋白.结果表明:在25℃条件下经1mmol/L IPTG诱导20h,融合蛋白被成功表达,其分子量约为19 000,为进一步纯化蛋白和对基因的调控功能方面研究奠定了基础.     

棉花脱氢抗坏血酸还原酶基因的克隆、原核表达与纯化

为进一步探讨脱氢抗坏血酸还原酶的生物学功能,克隆棉花的脱氢抗坏血酸还原酶基因,对该基因进行了原核表达,并对重组蛋白进行纯化和分析。通过RT-PCR方法扩增脱氢抗坏血酸还原酶基因全长,利用BamH I和Xhol I酶切位点将其克隆至组氨酸(histidine,His)融合蛋白表达载体pET28a中,转化大肠杆菌BL21(DE3)后,经异丙基硫代--βD-半乳糖苷(isopropy--βD-5-thiogalactoside,IPTG)诱导表达,用SDS-PAGE鉴定表达产物,并用亲和层析柱纯化重组表达的pET28a-DHAR蛋白。结果表明:重组体PET28a-DHAR经测序和酶切鉴定证实构建成功。导入大肠杆菌BL21进行表达,SDS-PAGE分析目的蛋白高效表达,相对分子量为26 kD左右,并获得了纯化的His-DHAR融合蛋白。     

丙型肝炎病毒截短型核心C区和NS_3区融合蛋白(C_8-NS_3)的原核表达

通过RT-PCR从HCV全长基因组中分别克隆HCV核心区和NS3非结构区的部分优势表面抗原的基因片段,运用重叠延伸PCR技术将它们拼接成融合基因,将融合基因再克隆到表达载体pTrcHis2 TOPO TA中,转化大肠杆菌Top10,阳性克隆经IPTG诱导融合蛋白的表达,表达产物经15%SDS-PAGE鉴定,重组蛋白经His标签纯化.经IPTG诱导可高效表达分子量约为14.4KD的融合抗原,重组蛋白主要以可溶性形式存在.经过纯化目的蛋白纯度达96.3%以上的,表达量约为550μg/mL.ELISA结果表明纯化蛋白具有良好的抗原性.     

酿酒酵母金属硫蛋白的表达、纯化及活性检测

通过PCR从酿酒酵母基因组DNA上扩增得到酿酒酵母基因CUP1编码的金属硫蛋白序列.将其编码序列克隆到质粒pTWIN1构建重组表达质粒pTWIN1-MT,转化大肠杆菌感受态细胞ER2566.重组融合蛋白CBD-intein1-MT在IPTG的诱导下得到表达,经SDS-PAGE和蛋白质印迹鉴定.用重组菌分别进行铜离子耐受...     

家蚕抗菌肽CM4和人可溶性BAFF融合基因的克隆、表达及活性鉴定

采用PCR法从含有人可溶性BAFF基因的pET30a( )扩增得到人sBAFF基因,通过rPCR将抗菌肽Cecropin CM4基因的2条单核苷酸链进行扩增得到CM4基因,再采用over-lap PCR法通过linker将hsBAFF与Cecropin CM4融合基因相连接.经纯化和鉴定后,定向插入到原核表达载体pET30a( )中,然后转化E.coliBL21(DE3),通过实验确定了表达该融合基因的最佳诱导条件:IPTG终浓度为1.0 mmol/L,诱导时间为5 h.温度为30℃,其表达量占全菌蛋白的40%.表达产物经SDS-PAGE分析,得到相对分子质量约为22 000的重组蛋白并且存在超声裂解后的上清中.重组蛋白经Western blot检测,结果显示重组蛋白可被鼠抗人可溶性BAFF的抗体识别.采用分子筛Sephadex G-75对重组融合蛋白进行纯化,并经SDS-PAGE对其鉴定.通过对其生物学功能的检测得知,纯化后的重组融合蛋白对大肠杆菌K12D31和真菌有明显的抑菌能力.     

麻疯树小热激蛋白JcHSP-17.5的纯化与活性鉴定

将实验室已有的pET32a-JcHSP17.5重组载体,经测序验证后,转入大肠杆菌BL21(DE3)plysS中,不同温度条件下,用不同浓度异丙基硫代-D-半乳糖苷(IPTG)诱导重组蛋白表达,优化表达条件;选择镍离子亲和层析柱(Ni-NTA)纯化JcHSP-17.5蛋白,SDS-PAGE电泳检测蛋白纯度;通过热激聚合反应来鉴定蛋白的分子伴侣活性.结果表明,17℃,200r/min,0.5mM IPTG诱导13h为JcHSP-17.5蛋白的最佳诱导表达条件,使用200mmol/L咪唑缓冲液纯化蛋白后,每500mL菌液可得到1.345mg的电泳纯蛋白,该蛋白在高温(45℃)条件下能够阻止苹果酸脱氢酶(MDH)发生聚合反应,表现出较强的分子伴侣活性.     

Characterization of Ordovician carbonate reservoirs, southeastern Saskatchewan, Canada

The discovery of the prolific Ordovician Red River reservoirs in 1995 in southeastern Saskatchewan was the catalyst for extensive exploration activity which resulted in the discovery of more than 15 new Red River pools. The best yields of Red River production to date have been from dolomite reservoirs. Understanding the processes of dolomitization is, therefore, crucial for the prediction of the connectivity, spatial distribution and heterogeneity of dolomite reservoirs.The Red River reservoirs in the Midale area consist of 3～4 thin dolomitized zones, with a total thickness of about 20 m, which occur at the top of the Yeoman Formation. Two types of replacement dolomite were recognized in the Red River reservoir: dolomitized burrow infills and dolomitized host matrix. The spatial distribution of dolomite suggests that burrowing organisms played an important role in facilitating the fluid flow in the backfilled sediments. This resulted in penecontemporaneous dolomitization of burrow infills by normal seawater. The dolomite in the host matrix is interpreted as having occurred at shallow burial by evaporitic seawater during precipitation of Lake Almar anhydrite that immediately overlies the Yeoman Formation. However, the low δ18O values of dolomited burrow infills (-5.9‰～ -7.8‰, PDB) and matrix dolomites (-6.6‰～ -8.1‰, avg. -7.4‰ PDB) compared to the estimated values for the late Ordovician marine dolomite could be attributed to modification and alteration of dolomite at higher temperatures during deeper burial, which could also be responsible for its 87Sr/86Sr ratios (0.7084～0.7088) that are higher than suggested for the late Ordovician seawaters (0.7078～0.7080). The trace amounts of saddle dolomite cement in the Red River carbonates are probably related to "cannibalization" of earlier replacement dolomite during the chemical compaction.     

A computer generator for randomly layered structures

AcomputergeneratorforrandomlylayeredstructuresYUJia shun1,2,HEZhen hua2(1.TheInstituteofGeologicalandNuclearSciences,NewZealand;2.StateKeyLaboratoryofOilandGasReservoirGeologyandExploitation,ChengduUniversityofTechnology,China)Abstract:Analgorithmisintrod…     

An Index mechanism for multi-scale view in spatial databases

There are numerous geometric objects stored in the spatial databases. An importance function in a spatial database is that users can browse the geometric objects as a map efficiently. Thus the spatial database should display the geometric objects users concern about swiftly onto the display window. This process includes two operations:retrieve data from database and then draw them onto screen. Accordingly, to improve the efficiency, we should try to reduce time of both retrieving object and displaying them. The former can be achieved with the aid of spatial index such as R-tree, the latter require to simplify the objects. Simplification means that objects are shown with sufficient but not with unnecessary detail which depend on the scale of browse. So the major problem is how to retrieve data at different detail level efficiently. This paper introduces the implementation of a multi-scale index in the spatial database SISP (Spatial Information Shared Platform) which is generalized from R-tree. The difference between the generalization and the R-tree lies on two facets: One is that every node and geometric object in the generalization is assigned with a importance value which denote the importance of them, and every vertex in the objects are assigned with a importance value,too. The importance value can be use to decide which data should be retrieve from disk in a query. The other difference is that geometric objects in the generalization are divided into one or more sub-blocks, and vertexes are total ordered by their importance value. With the help of the generalized R-tree, one can easily retrieve data at different detail levels.Some experiments are performed on real-life data to evaluate the performance of solutions that separately use normal spatial index and multi-scale spatial index. The results show that the solution using multi-scale index in SISP is satisfying.     

海南岛地体及其毗邻陆缘晚中生代—新生代古地磁研究和构造演化

本文叙述了对海南岛及其毗邻大陆边缘白垩纪到第四纪地层岩石进行古地磁研究的全部工作过程。通过分析岩石中剩余磁矢量的磁偏角及磁倾角的变化,提出海南岛白垩纪以来经历的构造演化模式如下:早期伴随顺时针旋转而向南迁移,后期伴随逆时针转动并向北运移。联系该地区及邻区的地质、地球物理资料,对海南岛上述的构造地体运动提出以下认识:北部湾内早期有一拉张作用,主要是该作用使湾内地壳显著伸长减薄,形成北部湾盆地。从而导致了海南岛的早期构造运动,而海南岛后期的构造运动则主要是受南海海底扩张的影响。海南地体运动规律的阐明对于了解北部湾油气盆地的形成演化有重要的理论和实际意义。     

Exciton Seebeck in Molecular Systems

Various applications relevant to the exciton dynamics,such as the organic solar cell,the large-area organic light-emitting diodes and the thermoelectricity,are operating under temperature gradient.The potential abnormal behavior of the exicton dynamics driven by the temperature difference may affect the efficiency and performance of the corresponding devices.In the above situations,the exciton dynamics under temperature difference is mixed with     

Achieving Unusual States of Matter Under High Pressure

The elongation method,originally proposed by Imamura was further developed for many years in our group.As a method towards O(N)with high efficiency and high accuracy for any dimensional systems.This treatment designed for one-dimensional(ID)polymers is now available for three-dimensional(3D)systems,but geometry optimization is now possible only for 1D-systems.As an approach toward post-Hartree-Fock,it was also extended to     

《Chinese Science Bulletin》SUBJECT INDEX TO VOLUME 59(2014)

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An on-line scaling method for improving scalability of a database cluster

The explosive growth of the Internet and database applications has driven database to be more scalable and available, and able to support on-line scaling without interrupting service. To support more client's queries without downtime and degrading the response time, more nodes have to be scaled up while the database is running. This paper presents the overview of scalable and available database that satisfies the above characteristics. And we propose a novel on-line scaling method. Our method improves the existing on-line scaling method for fast response time and higher throughputs. Our proposed method reduces unnecessary network use, i.e. , we decrease the number of data copy by reusing the backup data. Also, our on-line scaling operation can be processed parallel by selecting adequate nodes as new node. Our performance study shows that our method results in significant reduction in data copy time.     

An improved R-tree based on childnode''s probability

R-Tree is a good structure for spatial searching. But in this indexing structure,either the sequence of nodes in the same level or sequence of traveling these nodes when queries are made is random. Since the possibility that the object appears in different MBR which have the same parents node is different, if we make the subnode who has the most possibility be traveled first, the time cost will be decreased in most of the cases. In some case, the possibility of a point belong to a rectangle will shows direct proportion with the size of the rectangle. But this conclusion is based on an assumption that the objects are symmetrically distributing in the area and this assumption is not always coming into existence. Now we found a more direct parameter to scale the possibility and made a little change on the structure of R-tree, to increase the possibility of founding the satisfying answer in the front sub trees. We names this structure probability based arranged R-tree (PBAR-tree).     

Integrating GIS Web services based on mediating architecture

The geographic information service is enabled by the advancements in general Web service technology and the focused efforts of the OGC in defining XML-based Web GIS service. Based on these models, this paper addresses the issue of services chaining,the process of combining or pipelining results from several interoperable GIS Web Services to create a customized solution. This paper presents a mediated chaining architecture in which a specific service takes responsibility for performing the process that describes a service chain. We designed the Spatial Information Process Language (SIPL) for dynamic modeling and describing the service chain, also a prototype of the Spatial Information Process Execution Engine (SIPEE) is implemented for executing processes written in SIPL. Discussion of measures to improve the functionality and performance of such system will be included.