HSV1-tk基因的部分DNA序列分析

采用ＰＣＲ技术从商品质粒ｐＨＳＶ１０６扩增出ＨＳＶ１－ｔｋ基因（１１２８ｂｐ）,ＰＣＲ产物用ＢａｍＨＩ和ＥｃｏＲＩ双酶切后定向克隆至真核表达载体ｐｃＤＮＡ３,然后以重组质粒ｐｃＴＫ为模板ｔｋ基因的５端引物为ＤＮＡ测序引物进行部分ＤＮＡ序列分析,部分ＤＮＡ序列分析证明ＰＣＲ产物为ＨＳＶ１－ｔｋ基因正确无误,成功筛选到ＨＳＶ１－ｔｋ基因的真核表达载体ｐｃＴＫ,并为利用ｔｋ基因在实验动物体内进行自杀性基     

旋毛虫排泄分泌抗原p49基因的克隆

应用ＤＮＡ重组技术将编码旋毛虫肌幼虫４９ＫＤａ抗原的基因克隆于大肠杆菌中．设计特异的ＰＣＲ引物,用ＰＴ－ＰＣＲ技术直接从旋毛虫肌幼虫总ＲＮＡ中反转录并扩增出约１．１Ｋｂ的靶ＤＮＡ．用ＢａｍＨＩ和ＥｃｏＲＩ酶解后将其克隆到质粒载体ｐＵＣ１９中,用Ｘ－ｇａｌ培养基筛选重组子．该重组子经相同的核酸内切酶水解获得约２．７Ｋｂ和１．１Ｋｂ两个片段,分别与ｐＵＣ１９和目的基因的大小相同,目的基因经序列分析并与文献报道的序列比较发现具有９７．８％的同源性．     

部分取代苯定量结构-生物降解相关性(QSBR)研究

采用Ｃｈｅｍｓ３Ｄ中量子化学ＭＯＰＡＣ－ＡＭ１法计算了７种间苯胺类和８地苯酚的分子量高占有轨道能ＥＨＯＭＯ、分子最低空轨道能ＥＬＵＭＯ。用ＱＳＡＲ程序软件包查得分子体积Ｖｍ。结合分子连接性指数（＾３Ｘ,＾３Ｘ＾ｖ）对生物降解二级速率常数对数ｌｇＫｂ进行定量结构－生物降解相关性（ＱＳＢＲ）分析,通过回归分析,得到如下两个回归方程：ｌｇＫｂ＝－０．８３２－０．１１８Ｖｍ＋１．７４８＾３Ｘ＾ｖ,ｎ＝１５,Ｒ＾２＝０．８３２,ＳＥ＝０．５７７,Ｆ＝２９．７,ｐ＝０．０００。（１）ｌｇＫｂ＝０．１２４Ｖｍ＋１．７４９＾３Ｘ＾ｖ,ｎ＝１５,Ｒ＾２＝０．９９８,ＳＥ＝０．５５９１,Ｆ＝４１４８．９９,ｐ＝０．０００．（２）     

小麦叶绿体psbA基因的克隆及表达

用ＰＣＲ直接从小麦叶绿体基因组扩增到完整的ｐｓｂＡ基因，并构建了ｐｓｂＡ基因的克隆ｐＴＤ１Ⅱ。为研究ｐｓｂＡ基因在Ｅ·ｃｏｌｉ中的表达，将完整的ｐｓｂＡ基因正向插入高表达载体ｐＫＫ２２３－３中构建表达克隆ｐＫＴＤ１。含有重组表达质粒的转化细胞经ＩＰＴＧ诱导后提取总蛋白，经ＳＤＳ－ＰＡＧＥ分析，小麦叶绿体ｐｓｂＡ基因能在Ｅ·ｃｏｌｉ中表达３２ｋＤ的Ｄ１蛋白，表达的Ｄ１蛋白占细菌总蛋白的３％以上。     

用PCR法构建乳腺特异性表达非乳蛋白基因的研究

将ＰＣＲ法分别从绵羊和人血基因组ＤＮＡ中扩增出的绵羊β－乳球蛋白基因（ＢＬＧ）５＇端调控区８９８ｂｐ的片段和人骨髓单核细胞表面分化抗原ＣＤ１４基因（ｈＣＤ１４）成熟肽１２４５ｂｐ的片段连接。连接片段插入ｐＵＣ１９ ＥｃｏＲＩ－ＫｐｎＩ位点，构建成ｐＢＬＧ－ｈＣＤ１４质粒。该质粒经ＫｐｎＩ及ＣｃｏＲＩ－ＨｉｎｄⅢ酶切、ＰＣＲ法扩增ＢＬＧ和ｈＣＤ１４分析后，进一步用＾３２Ｐ－ＢＬＧ探针杂交确证。用Ｅｃ     

牛α—s1酪蛋白基因3‘端DNA的PCR扩增,克隆及鉴定

本研究以牛血总ＤＮＡ为模板，用ＰＣＲ技术扩增牛α－ｓ１酪蛋白基因的５＇端３．６ｋｂＤＮＡ片段和３＇端１．５ｋｂＤＮＡ片段的调控区序列，得到了相应的特异性扩增片段．用Ｋｌｅｎｏｗ处理后，将两个扩增片段分别与经Ｓｍａｌ酶切的ｐＵＣ１８质粒载体用Ｔ４ＤＮＡ连接酶连接，转化大肠杆菌ＪＭ１０９．在含有Ｘ－ｇａｌ，ＩＰＴＧ和Ａｍｐ的选择培养基上培养．从白色菌落中提取质粒ＤＮＡ，进行限制酶切鉴定．结果得到一个插入有１．３ｋｂＤＮＡ片段的阳性克隆．对其进行部分序列分析表明，该片段为５＇端缺失约１７０ｂｐ的牛α－ｓ１酪蛋白基因３＇端及下游区序列．     

用加端PCR技术改造h－IGF－1cDNA

用ＤＮＡ合成仪合成了分别带有ＰｓｔＩ位点和ＳａｌＩ位点及终止密码子的２个用于扩增ｈＩＧＦ－１ｃＤＮＡ的ＰＣＲ引物．利用合成的引物，７００ｂｐ长的ｈＩＧＦ－１ｃＤＮＡ模板和Ｔａｑ聚合酶进行ＰＣＲ扩增．扩增产物经电泳鉴定后克隆进Ｍ１３ｍｐ１８载体，进行核苷酸序列分析．结果显示：ＰＣＲ产物含已发表的ｈＩＧＦ－１成熟蛋白的编码序列和５＇端的ＰＳｔＩ位点及３＇端的ＳａｉＩ位点及终止密码ＴＡＧ．用加端ＰＣＲ技术成功地扩增和改造了ｈＩＧＦ－１的编码序列．     

类志贺氏菌毒素Ⅱ型变异体基因的克隆与鉴定

用聚合酶链式反应（ＰＣＲ）技术,从大肠杆菌ＴＢ１中扩增出类志贺氏菌毒素Ⅱ型变异体（ＳＬＴⅡｅ）的Ａ亚单位基因（ｓｌｔ－ⅡｅＡ）的９６０ｂｐ的编码序列和Ｂ亚单位基因（ｓｌｔ－ⅡｅＢ）的１０７ｂｐ的编码序列,将这两个ＰＣＲ扩增产物在ＥｃｏＲ１和ＢａｍＨ１位点分别克隆进ＰＵＣ１８质粒载体,并转化到大肠杆菌ＴＧ１中,再根据生内切酶酶切分析筛选到含有ｓｌｔ－ⅡｅＡ的重组质粒Ｐ１８ｓｌｔ－ⅡｅＡ和含有ｓｌｔ－     

番木瓜环斑病毒复制酶基因的克隆和序列分析

用ＲＴ－ＰＣＲ技术从ＰＲＶ－ＡＬ中分离到复制酶（ＲＰ）基因，将基因克隆进载体ｐＵＣ１８，用双脱氧链终止法测定了基因序列，表明其全长为１６０２ｂｐ，与国内外报道的ＨＡ５－１、ＹＫ和Ｓｍ的ＲＰ基因相比，同源性分别达８２．８０％，９５．０７％和９１．８３％．     

日本脑炎病毒（JEV）内蒙古分离株M73—1E基因的5′端？…

根据国外报道的ＪＥＶ（Ｊａｐａｎｅｓｅ ｅｎｃｅｐｈａｌｉｔｉｓ ｖｉｒｕｓ）基因组全序列,针对ＪＥＶ Ｅ基因５′端设计合成一对特异引物,以日本脑炎病毒内蒙古分离株Ｍ７３－１ＲＮＡ为模板,经ＲＴ－ＰＣＲ扩增,获得３６６ｂｐ的ＪＥＶ Ｅ基因ｃＤＮＡ片段。将此片段重组于质粒ｐＵＣ１９中,并转化大肠杆菌ＤＨ５α,经ＰＣＲ扩增,酶切及序列分析,结果表明ＪＥＶ Ｍ７３－１ ５′端１２６个核苷酸序列与ＪＥＶ日     

Construction of single-chromosome DNA library fromLilium regale Wilson

A protocol of simple rapid microdissection of single-chromosome, amplification and cloning of its DNA fromLilium regale Wilson is described. Single-chromosome, microdissected by micromanipulator, was put into a 0.5 mL Eppendorf tube and digested with Sau3A, and then the Sau3A linker adaptors were ligated to the ends of DNA fragments. After 2 rounds of PCR amplification with one chain of linker adaptor as primer, the PCR products thus obtained have a length of 300–2500 base pairs (bp) with predominant fragments at about 1000 bp. Southern blot analysis confirmed that the PCR products originated from the genome ofLilium regale Wilson. By cloning the amplification products from the second round of PCR, single-chromosome DNA library was constructed, in which about as many as 100000 recombinant clones were produced. A total number of 84 clones were analysed, and it was revealed that the inserts ranged in size from 300 to 1800 bp, with an average of780 bp. Compared with the methods described in other literature, this protocol, eliminating the need for enzymatic digestion and ligating micromanipulation of chromosomal DNA in nanoliter volumes, permits the efficient amplification of single chromosome (not tens of chromosomes as reported before) and the fragments (780 bp in average) cloned in this study are longer than those reported before (650 bp in average).     

Differentiation of Epinephelus moara from E. bruneus by improved nest-tetra-primer-specific PCR

Epinephelus moara and E. bruneus are closely related species in the genus Epinephelus (Perciformes, Serranidae). Their morphological similarity, changing color pattern at different stages and living conditions make them difficult to be differentiated. To identify these two species, an improved nest-tetra-primer-specific PCR assay was developed. Three specific molecular markers, the control region NC1 (394 bp), species-specific internal region ND2-M (268 bp) and ND2-B (122 bp), were identified in the mitochondrial ND2 gene from these two grouper species. Five markers were also discovered in the ITS1 regions of their nuclear ribosomal DNA, which were the control regions NC2 (588 bp) and NC3 (563 bp), and species-specific internal regions rDNA-M (426 bp), ITS1-M (488 bp) and ITS1-B (304 bp). This method provided a highly specific, precise, reliable and rapid molecular marker technique to discriminate between the two grouper species, as well as a new way of DNA identification to differentiate closely related species in fishes.     

PCR amplification of Sox genes inMisgurnus anguillicaudatus andParamisgurnus dabryanus (Cypriniforms; Cobitidae)

Using the primers which specially amplify the conservative motif of Human SRY gene, we studied the PCR amplification of Sox genes in genomic DNA of two species of mud loach:Misgurnus anguillicaudatus andParamisgurnus dabryanus. Four bands with the length of 200,550,940 and 1000 bp respectively, were presented in the PCR products ofMisgurnus anguillicaudatus. Three bands with the length of 200,550 and 900 bp were presented in that ofParamisgurnus dabryanus. Southern blotting results indicated that the 200 and 550 bp bands are specially positive. There is no difference between male and female individuals as well as between these two species. Chang zhongjie: Born in Nov. 1965, Ph. D. graduate student     

Cloning of human cytokine signal transduction inhibitor genehumSOCS-2

An EST (gb/AA115239) with high identity to the mouse cytokine signal transduction inhibitor genemmSOCS-2 was selected in GenBank EST database by the homologous screening method. The cDNA with the same sequence of the EST was got in human placenta cDNA library by PCR and a 1011 bp cDNA fragment was selected using above cDNA as probes to perform walking hybridization in placenta cDNA library. The cDNA fragment contains one 594 bp open reading frame (ORF) which encodes 198 amino acid residues. It was proved to be novel after NCBl database screening. Homology comparison showed that this gene has 93% identity tommSOCS-2 at the amino acid level and it has high identities to other related genes in SH₂ domain and SOCS box, so it was namedhumSOCS-2 and the accession number in GenBank is gb/AF020590. The expression analysis showed that the gene is expressed obviously higher in prostate than in other 15 human tissues.     

人MiTERF3基因启动子的克隆及其荧光素酶报告基因载体的构建

人MiTERF3基因编码线粒体基因转录和能量代谢的负调控因子。采用PCR技术对人MiTERF3基因5''侧翼上游1251 bp启动子序列进行扩增,并将其克隆至荧光素酶表达载体pGL6-TA,构建人MiTERF3基因启动子荧光素酶报告基因质粒。经酶切、测序鉴定后,将其用脂质体转染体外培养的HEK293细胞株,利用双荧光素酶测定系统检测其表达活性。研究结果表明,克隆获得的1251 bp DNA序列与GenBank报道的一致,且插入方向正确。含人MiTERF3基因启动子的报告基因荧光素酶的表达活性显著提高（P<0.05）,约为对照组（空载体pGL6-TA）的9.8倍。本研究通过对人MiTERF3基因启动子的克隆及其荧光素酶表达载体构建与表达活性的测定,为进一步阐明人MiTERF3基因表达的调控机制奠定实验基础。     

BMP－3及BMP－5在不同组织和细胞中的表达

报道ＢＭＰ－３及ＢＭＰ－５在不同组织细胞中的表达．将人的神经母细胞瘤ＳＫ细胞的总ＲＮＡ及人的脑、肝、胸腺、脾、胎盘及睾丸的总ＲＮＡ反转录成ｃＤＮＡ作为模板，利用设计的编码ＢＭＰ－３和ＢＭＰ－５成熟蛋白的专一性引物分别扩增出相应的片段．ＰＣＲ产物的琼脂糖凝胶电泳结果表明，ＢＭＰ－３及ＢＭＰ－５在不同组织细胞中表达类型不同．     

人白介素-2重组基因的T载体和pET28a表达载体的构建

从人单核细胞中提取总RNA,利用RT－PCR方法构建cDNA—mRNA杂交链,然后用人白介素－2基因的特异引物进行PCR,PCR产物回收后与T载体连接,经过转化、质粒酶切、测序等一系列手段对插入情况和序列是否正确进行鉴定．鉴定正确后用另一组带有酶切位点的引物和pfu酶进行PCR,用EcoR Ⅰ和Hind Ⅲ双酶切PCR回收片段及pET28a表达载体,二者经过连接、转化、质粒酶切、测序等手段重新鉴定序列是否正确．结果表明,插入列T载体和pET28a载体中的序列为402 bp的不带信号肽的基因片段,此序列和GenBank中公布的IL-2序列相一致,故从人单核细胞中提取mRNA后,利用RT-PCR构建的人IL-2基因序列完全正确,为下一步的工作提供了基础。     

蚯蚓纤溶酶(EFE-3D)基因的合成及其在毕赤酵母中的表达

选择毕赤酵母偏爱密码子,分成32个长约48 bp且相互配对的寡核苷酸片段,合成蚯蚓纤溶酶基因EFE-3D。寡核苷酸片段经5′磷酸化后,通过错位拼接,PCR(聚合酶链式反应)一次性完成新基因的合成并且克隆至载体pP IC 9K中。最后利用电穿孔法将新基因克隆至毕赤酵母表达系统并进行诱导表达,用免疫印记法检测表达产物,最后利用纤维平板确定其表达产物的活性为3 500 mm2/mL,1 L发酵液相当于48 m g天然蚯蚓纤溶酶活性。     

Evaluation and characterization of an endosperm-specific sbeⅡa promoter in wheat

Starch,the main component of the wheat grain,is the product of a complex biochemical pathway. The sbeⅡα gene plays a key role in controlling the synthesis of starch, in particular, the biosynthesis of amylopectin,in maturing wheat grain.To investigate its regulatory mechanisms and endosperm-specific expression pattern, the sbeⅡα promoter (3094 bp in length) was cloned using APCR and sequenced.The effect of a series of deletions was studied using a GUS transient assay system. Results showed that the 3094 bp sequence (sbe.g construct) exhibited full stable promoting activity and that the activities of 5′ or 3′ deletions reduced levels of GUS expression. Some constructs with internal deletions showed only weak activity, however,sbe.e, with a deletion from -1579—--1210 bp resulted in higher levels of expression than the full-length promoter sequence, sbe.g. This indicates that motifs such as the -300 bp element, G-box and/or P-box act as positive elements and are necessary in determining the promoter‘s endosperm-specific pattern and that negative repressor elements or motifs may also be present within the -1579—-1210 bp sequence. The age of wheate ndosperm tissue used in the GUS-transient assay system is shown to be of significant importance.     

嗜麦芽黄单胞菌CG样受体跨膜域克隆与分析

根据已知生物LH/CG受体同源性较大的跨膜域序列设计引物，以嗜麦芽黄单胞菌基因组DNA为模板进行PCR扩增，将约600bp目的产物克隆到pUCm-T载体上，经酶切及PCR扩增筛选鉴定得到重组质粒pUCm-Rec，以DIG标记的PCR扩增片段作为探针进行DNA斑点杂交，确证目的PCR扩增片段与该菌染色体DNA有同源性，克隆到的593bpCG样受体跨膜域序列在GenBank中的注册号为AY355346，再以地高辛标记的593bp跨膜域序列为探针，从构建的该菌基因组文库中，筛选到可能与CG样受体属于同一跨膜受体家族的编码组氨酸激酶／效应调节杂合蛋白部分序列的685bp核酸片段(其在GenBank中的注册号为AY359445)。