Abundance,species richness and diversity of the orb-weaving spider families Araneidae,Nephilidae and Tetragnathidae in natural habitats in Trinidad,West Indies

This study examined the biodiversity of orb-weaving spiders in natural habitats in Trinidad, a continental island with a northern South American fauna. Forty-six localities were sampled, classified into seven formations (representing vegetation structure) and 16 habitat types (based on plant species composition), using visual search and sweep-netting methods, resulting in a total of 1225 individuals of 57 species. Abundance and species richness were significantly related to formation but not habitat type, while both factors influenced species diversity, evenness and dominance. Gamma (γ) diversity had a larger component of β than α diversity did, indicating that between-habitat differences are a substantial part of regional diversity in orb-weaving spiders in Trinidad.     

Conservation in a changing landscape: habitat occupancy of the critically endangered Tennent’s leaf-nosed lizard (Ceratophora tennentii) in Sri Lanka

Landscape modification is a key driver of global species extinction. Thus, understanding how species react to changes is essential for effective conservation management in modified landscapes. We examined the impact of selected land use patterns on the critically endangered Ceratophora tennentii in the Knuckles mountain range of Sri Lanka where lizards occupy patches of both natural undisturbed forests and modified plantations – evidently, those with a forest canopy. We tested three potential explanations for non-random habitat selection: availability of suitable microhabitat pockets, availability of prey and direct threats from humans. The microhabitat pockets occupied by the lizards were characterised by shade, humidity and the density of perches. Most lizards were found in mixed cardamom forests followed by natural forests and cardamom plantations, but none were observed in the pine plantations. Food availability showed similar patterns among habitats. Direct mortality by humans did not influence the distribution of this species. Our work indicates that habitat modifications that retain the structural complexity of the vegetation would still permit the existence of the species in densities equal to or greater than that of undisturbed forest patches. It adds to a growing body of literature that signifies the importance of disturbed habitats (intermediate disturbance hypothesis) in protecting threatened species of fauna. It is highly unlikely that some disturbed habitats will be ever be returned to their former pristine state in time frames that are important for species’ conservation. Hence, attention is needed in developing suitable approaches to manage and conserve species across disturbed habitats.     

Effects of habitat disturbance on diets of Great Horned Owl ( Bubo virginianus ) in a cold desert

To determine the potential effect of habitat disturbance, Great Horned Owl ( Bubo virginianus ) diets were quantified in disturbed and undisturbed habitats over a 2-year period at Dugway Proving Ground in the Great Basin Desert of Tooele County, Utah. Invertebrates were the most abundant prey by count, whereas mammals constituted the majority of diet by biomass. Species richness in the diet did not differ between habitats or among seasons after correcting for the number of pellets in each sample. However, the number of vertebrate species was greater than the number of invertebrate species in the diet, and this ratio differed between disturbed and undisturbed habitats. Invertebrate species made up a greater proportion of total species richness in the diet in the undisturbed than the disturbed habitat. Nineteen species occurred in the diet in only 1 of the 2 habitat types (7 unique species in disturbed habitat, 12 unique species in undisturbed), but all such species were rare and contributed little both by count and biomass to the overall diet. Of the 20 most important species found in owl diets in both habitats (based on percent biomass), none were more common in 1 habitat than the other after correcting for multiple tests. Although there were minor differences in the diet between disturbed and undisturbed habitats, habitat alteration and degradation of native vegetation on Dugway Proving Ground did not affect the major components of the diet of Great Horned Owls.     

Herpetological diversity across intact and modified habitats of Nosy Komba Island,Madagascar

A six month herpetological survey was undertaken between March and September 2015 on Nosy Komba, an island off of the north-west coast of mainland Madagascar which has undergone considerable anthropogenic modification. A total of 14 species were found that have not been previously recorded on Nosy Komba, bringing the total island diversity to 52 (41 reptiles and 11 frogs). The species assemblage, richness and abundance of four distinct habitat types were compared: closed-canopy forest, disturbed-canopy forest, shade-grown coffee plantation and mixed open plantation. The anthropogenic habitats on Nosy Komba were found to be of high conservation value for reptile species, where species richness and abundance found during surveys was equal to or higher than closed-canopy forest. By contrast, the abundance and species richness for frogs was reduced in anthropogenic habitats, especially in sun-exposed plantations. The forested areas of Nosy Komba contain twelve IUCN threatened species (9 reptiles and 3 frogs). Of these, Uroplatus henkeli, Uroplatus ebenaui, Phelsuma seippi, Zonosaurus subuniclor, Stumpffia psologlossa and Stumpffia pygmaea were also found in shade-grown coffee plantations, demonstrating the conservation value of these anthropogenic environments. Five threatened species on Nosy Komba were found exclusively in forested areas: Brookesia minima, Brookesia ebenaui, Lygodactylus madagascariensis, Rhombophryne testudo and Thamnosophis stumpffi. Our surveys demonstrate the importance of Nosy Komba for conserving regionally endemic and threatened species, and the often under-appreciated value of anthropogenic environments in species conservation, when also coupled with the protection of primary forest.     

Oribatid mite (Acari) community structure in steppic habitats of Burgos Province,central northern Spain

This work is a study of the communities of oribatid mites in steppic areas of Burgos Province, central northern Spain, in relation to different habitat types belonging to natural or disturbed ecosystems. The primary objective was to find the relationship between anthropogenic use of land and several diversity indices. Parameters such as abundance, species richness, real diversity (H′) and equitability (J′) of the mite communities were calculated in 20 soil plots, sampled in spring and autumn 2000, belonging to the predominant habitat types of this area: (1) cultivated lands, (2) abandoned crop lands, (3) grasslands/pastures, and (4) natural oak forests or a pine plantation. The most widespread species in the area as well as the most abundant taxa overall are documented, together with the faunistic checklist of oribatid mites identified in the study. The results show a general decline in the composition of the oribatid community, in terms of species diversity and abundance, from non‐disturbed soils to cultivated lands. The number of species (richness) was usually higher in forest soils than in disturbed ecosystems, in which the most degraded soils showed the lowest number of species. The community analysis shows the differences due to habitat type and ubiquitous bioindicator species.     

Bird community composition in relation to habitat and season in Betatakin Canyon, Navajo National Monument, Arizona

Bird species density, diversity, and species richness in relation to habitat and seasonal variations were studied in the Betatakin Canyon area of Navajo National Monument, Arizona. The two most prominent habitat types are a riparian forest deep in the canyon bottom and a mature pinyon-juniper woodland on the mesas and slopes above the canyon. One hundred thirty-five species of birds were encountered during the study and recorded by season and habitat. The avifauna assemblages demonstrate definite habitat selection into groups associated with the riparian and pinyon-juniper woodland communities. Diversity, density, and species richness were greatest in the riparian habitat during the spring and summer months. The differences in bird community composition were greater between seasons than between habitats. Pinyon pine and Gambel oak were highly selected as perch sites in the pinyon-juniper and riparian areas, respectively.     

Effects of habitat type and degradation on avian species richness in Great Basin riparian habitats

The overwhelming majority of bird species in the Great Basin region are found in riparian habitats. However, most previous research on the impact of change in habitat condition through degradation on these bird communities failed to account for the large intersite differences, in both habitat type and extent of degradation. We examined songbird communities in 4 riparian habitat types (meadows, willow-birch-, and aspen-dominated forest stands) during summers 1994 (last year of a 7-yr drought) and 1995 (following the 6th wettest winter recorded) in the Toiyabe Mountain Range of central Nevada. Habitat degradation significantly influenced bird species richness in riparian areas, but the impact was dependent upon habitat type. While meadow bird communities were affected adversely by habitat degradation, with significant drops in species richness on degraded sites, bird species richness in forested riparian habitats was consistently greater on degraded sites. Data for the 6 most common species seen during our study indicated that degradation may have influenced distribution of American Robins ( Turdus migratorius ) and Yellow Warblers ( Dendroica petechia ), but habitat type was the best predictor of abundance for House Wrens ( Troglodytes aedon ), Red-naped Sapsuckers ( Sphyrapicus nuchalis ), Warbling Vircos ( Vireo gilvus ), and Brewer's Blackbirds ( Euphagus cyanocephalus ). Avian species diversity in meadow habitats may be linked to moisture levels during specific times of the year. Diversity increased during the pre-migratory period of the dry year (1994) when compared with that of the breeding season, but was unchanged in the wet year (1995).     

Evaluating plant invasions from both habitat and species perspectives

We present an approach to quantitatively assess nonnative plant invasions at landscape scales from both habitat and species perspectives. Our case study included 34 nonnative species found in 142 plots (0.1 ha) in 14 vegetation types within the Grand Staircase-Escalante National Monument, Utah. A plot invasion index, based on nonnative species richness and cover, showed that only 16 of 142 plots were heavily invaded. A species invasive index, based on frequency, cover, and number of vegetation types invaded, showed that only 7 of 34 plant species were highly invasive. Multiple regressions using habitat characteristics (moisture index, elevation, soil P, native species richness, maximum crust development class, bare ground, and rock) explained 60% of variation in nonnative species richness and 46% of variation in nonnative species cover. Three mesic habitats (aspen, wet meadow, and perennial riparian types) were particularly invaded (31 of 34 nonnative species studied were found in these types). Species-specific logistic regression models for the 7 most invasive species correctly predicted occurrence 89% of the time on average (from 80% for Bromus tectorum , a habitat generalist, to 93% for Tamarix spp., a habitat specialist). Even with such a modest sampling intensity (<0.1% of the landscape), this multiscale sampling scheme was effective at evaluating habitat vulnerability to invasion and the occurrence of the 7 most invasive nonnative species. This approach could be applied in other natural areas to develop strategies to document invasive species and invaded habitats.     

Poisonous plants of Utah

Bird species density, diversity, and species richness in relation to habitat and seasonal variations were studied in the Betatakin Canyon area of Navajo National Monument, Arizona. The two most prominent habitat types are a riparian forest deep in the canyon bottom and a mature pinyon-juniper woodland on the mesas and slopes above the canyon. One hundred thirty-five species of birds were encountered during the study and recorded by season and habitat. The avifauna assemblages demonstrate definite habitat selection into groups associated with the riparian and pinyon-juniper woodland communities. Diversity, density, and species richness were greatest in the riparian habitat during the spring and summer months. The differences in bird community composition were greater between seasons than between habitats. Pinyon pine and Gambel oak were highly selected as perch sites in the pinyon-juniper and riparian areas, respectively.     

Species diversity and habitat complexity: does vegetation organize vertebrate communites in the Great Basin?

In this study, we have examined the effect of vegetation structure on the three major vertebrate taxa in Great Basin habitats of southwestern Utah. The effect of increasing vegetation heterogeneity, both horizontally and vertically, on the diversities of lizards, rodents, and postbreeding birds was investigated. We found no statistically significant relationship between diversity of all animal taxa and horizontal vegetation heterogeneity, although lizard diversity tended to decrease with increasing heterogeneity and rodent diversity tended to increase. Bird species diversity was positively correlated with vertical habitat heterogeneity. Abundances were highest for rodents in pinyon/juniper habitat and highest for lizards and birds in areas with the highest grass cover. Species richness was highest in sagebrush habitat for rodents but highest for lizards and birds in pinyon/juniper. Evenness values were relatively similar and high for birds and rodents and were relatively high for lizards in all habitats except for pinyon/juniper, which had an evenness value of 0.38. For rodents and lizards, abundance was significantly correlated with the index for horizontal habitat heterogeneity. After logarithmic transformation, abundance of lizards was positively correlated with increasing vegetation complexity. Combined abundance of lizards and rodents was also positively correlated with vegetation complexity. Rodent and lizard abundances, however, were affected by different aspects of the habitat. After logarithmic transformation, lizard abundances increased significantly with increasing grass cover, whereas rodent abundances increased significantly with increasing shrub cover.     

Urbanization impacts on the trophic guild composition of bird communities

Urbanization transforms the landscape and generates loss of pristine habitats. We investigated the urbanization effect on bird communities in a growing South American city (Santa Fe, Argentina) and hypothesized that if habitat structure and human disturbance change along an urban gradient, the richness and abundance of trophic guilds should also vary accordingly. We placed 50 transects 100 m long × 50 m wide in five districts with different levels of urbanization, determined by habitat structure variables. We recorded the number and abundance of species and the amount of pedestrians and vehicles passing through each transect. We recorded 23% of all bird species known for the Santa Fe province and categorized them within 19 trophic guilds. The percentage of area covered by herbaceous vegetation, water bodies and trees and shrubs had a positive relationship with the richness and abundance of most of trophic guilds (hawking aerial, terrestrial, bark and foliage insectivores; terrestrial and generalized granivores; generalized, aquatic diving and foliage omnivores; hawking aerial, aquatic diving and striding carnivores; nectarivores; and aquatic filters). Pavement surface and human disturbance variables had a negative relationship with the richness, and high buildings and pavement surface had a positive relationship with the abundance of terrestrial omnivores and coursing aerial insectivores. Variation partitioning revealed that habitat structure and human disturbance were better predictors of the richness than the abundance of each trophic guild. Results showed that trophic guilds associated to vegetation strata were seen to increase their richness and abundance towards green areas, even if they presented generalist or specialist habits. Urban planners should conserve or manage the surrounded natural spaces when the growth of the city is directed to these areas and increase the availability of environmental features within the urban matrix.     

The influence of habitat features on amphibian distribution in Northeastern Greece

Environmental and isolation variables relating to abundance of breeding amphibians, species richness and community structure at different spatial scales were examined in the Dadia-Lefkimi-Soufli Forest National Park, Evros, Greece. Logistic regression and a generalized linear model were used to relate several habitat characteristics to species occurrence and species richness. The community structure responses to breeding-pond features were examined at four spatial scales using canonical correspondence analysis (CCA). The richest communities live in low-altitude ponds, with stony or clay bottoms, high solar exposure and abundant submerged and floating vegetation. The CCA models were significant (p < 0.005) and revealed the influence of altitude, percentage of field and broadleaf forest coverage, and number of water bodies on amphibian species assemblages at all four spatial scales. There is a specific need for holistic management of amphibians that will consider habitat connectivity, particularly between aquatic and terrestrial habitats, at a larger, more interconnected scale.     

Temporal and seasonal variations in parasites of Metynnis lippincottianus (Characiformes: Characidae), a host from the eastern Amazon (Brazil)

ABSTRACT

This study investigated the influence of temporal and seasonal variation (rainy/dry cycle) on the component community structure and infracommunities of parasites in Metynnis lippincottianus from the eastern Amazon (Brazil). A total of 8,774 parasites representing 9 species and 22,765 parasites representing 12 species was collected in 2011 and 2016 respectively, but only 42.8% of the species were common to both study years. In both years, there was a dominance of Ichthyophthirius multifiliis and the component community was 51% dissimilar. The species richness of parasites and the Berger–Parker dominance were higher in 2016, while the evenness and Brillouin diversity were higher in 2011. The prevalence and abundance of I. multifiliis and P. pillulare, as well as the prevalence of Contracaecum sp. were higher in the rainy season. The abundance of Anacanthorus strongylophalus, Urocleidoides sp., Dadayus pacupeva and Dadaytrema oxycephala was higher in the dry season. Infection with Procamallanus (Spirocamallanus) inopinatus was not influenced by the season, while by Trichodina sp. occurred only in the dry season and Ergasilus xinguensis only in the rainy season. The species richness of parasites, Brillouin diversity index and evenness were higher in the dry season, while the Berger–Parker index was higher in the rainy season. Temporal variation of communities and infracommunities of parasites was influenced by the body size of host populations and increase in anthropogenic impacts. Effect of seasons on environmental quality, host size and availability of infective stages of parasites were the determining factors in structuring the component communities and infracommunities of parasites.     

Elevational zonation of birds,insectivores, rodents and primates on the slopes of the Andringitra Massif,Madagascar

A review is presented of the birds, lipotyphlans, rodents and lemurs occurring across an elevational transect from 720 to 2450 m within the 31160ha Parc National (PN) d'Andringitra in south-central Madagascar. The broad range of habitats within this reserve consists of lowland forest, montane forest, sclerophyllous forest, montane thicket, to open areas of bare rocks covered by geophytes. Eight different zones were surveyed across this elevational range for most of these four vertebrate orders. On the basis of these surveys and other sources of information, 106 species of birds, 16 species of Lipotyphla, 11 species of rodents (including two introduced species) and 13 species of primates are documented within the reserve. Surveys of the carnivores are incomplete, although eight species, three of which are introduced, have been recorded in the reserve. Forty-eight species of non-volant mammals are known from the Andringitra Massif, 43 of which are endemic to Madagascar. The highest species richness for birds was 85 species in the disturbed lowland forest at 720m zone and there was a subsequent reduction in the number of species at each site with increasing elevation. The two zones at 1210 and 1625 m with montane and mixed montane/sclerophyllous forest had the greatest species richness of non-volant mammals with 26 species (25 non-introduced). Lemurs showed decreasing species richness with increasing elevation. Small mammals showed broad elevational ranges and high species diversity in the middle to upper portion of the forest zone, with lipotyphlans peaking at 1990 m and rodents between 1625 and 1960 m. About 88 species of extant native rodents, carnivores, lipotyphlans and primates are currently recognized to occur on Madagascar. Thus, the PN d'Andringitra holds nearly 50% of the total known fauna of these groups from the island. This relatively small reserve plays a major role in safe-guarding a large proportion of the non-volant mammal fauna of Madagascar.     

Influence of soil and site characteristics on Palouse prairie plant communties

The structure of grassland communities can vary widely in response to heterogeneous habitat variables. In this study we document plant communities, soil types, and site characteristics for 12 Palouse prairie remnants in southeastern Washington and northern Idaho. We used general linear models to test the predictive value of 6 biophysical variables (slope, aspect, distance from edge, edge type, vegetation structure, and soil type) on 3 plant community metrics: species richness, Simpson’s diversity index, and the dominance of exotic species. From full models including all variables, we used Akaike’s information criterion (AIC) to select the best model for each metric. Aspect and vegetation structure were significant predictors of species richness ( R 2 = 0.08) and diversity ( R 2 = 0.09), while aspect, soil type, distance from edge, and edge type (type of adjacent matrix habitat) influenced the dominance of exotic species ( R 2 = 0.28). Additional soil sampling determined that the depth to a restrictive layer also had significant impacts on the dominance of exotic species ( R 2 = 0.31). This study confirms that biophysical characteristics influence Palouse prairie plant communities and may help set research and conservation priorities for isolated and uninventoried remnants.     

A herpetological survey of the Kathmandu Valley,Nepal, and phylogenetic identification of Megophrys (Xenophrys) zhangi

ABSTRACT

The herpetofauna of Nepal have been historically understudied, and although previous studies have reported on bioinventory surveys of the Kathmandu Valley, few have surveyed widely during the peak monsoon season. In addition, past studies largely neglected to survey intact forest habitats. Here we conduct a comprehensive field survey of the herpetofauna of the Kathmandu Valley, Nepal, with an emphasis on the surrounding foothills containing intact forest habitat. We record natural history and distribution data for seven species of amphibians and four species of reptiles. We also use mitochondrial sequence data to confirm the phylogenetic placement of two frog species, Megophrys (Xenophrys) parva and Duttaphrynus melanostictus. Using phylogenetic and morphological data we assign Megophrys parva from the Kathmandu Valley to Megophrys zhangi. We find that while this species shares a haplotype with its sister species, Megophrys monticola, morphological data align the individuals from the Kathmandu Valley with M. zhangi from Tibet. We find that M. zhangi exhibits no phylogenetic structure within the Kathmandu Valley, and wider sampling is needed throughout the Himalayas to determine its full range. These findings support the hypothesis that molecular sequence data will lead to the discovery of cryptic species in Nepal and facilitate the revision of species taxonomy.     

Associations of Small Mammals Occurring in a Pluvial Lake Basin, Ruby Lake, Nevada

Ruby Lake is a highly mesic and vegetationally diverse pluvial lake basin of east central Nevada. Small mammal associations were examined in six plant communities at Ruby Lake using transects of live traps. Small mammal activity was recorded for these six habitats plus an additional three other specialized habitats. A total of 11 species of small mammals were trapped from the six habitat types; from the entire study area 26 species were trapped or observed. Two greasewood shrub habitats and a shadscale-spiny hopsage habitat held the highest number of trapped species, 6, 5, and 7, respectively. The mesic haymeadow and spring habitats, as well as the big sagebrush-antelope bitterbrush habitat held 4 trapped species each. Peromyscus maniculatus and Perognathus parvus made up 76% of the total captures and were found in all habitat types except marshlands. Eutamius minimus was found in four of the six habitat types, while Dipodomys ordii , Dipodomys microps , Perognathus parvus , and Microtus montanus were limited to specialized habitats. Mesic adapted, wetland species such as Mustela vison , Ondatra zibethicus , and Sorex vagrans possibly dispersed into Ruby Valley from the northeastern drainages and valleys during the late Pleistocene or Holocene.     

Arthropod and plant communities as indicators of land rehabilitation effectiveness in a semiarid shrubsteppe

We describe a case study evaluating the ecological impact of Bromus tectorum L. (cheatgrass) invasion following fire disturbance and the effectiveness of revegetation as a means of rehabilitation in a degraded semiarid shrubsteppe system. The effectiveness of rehabilitation efforts was assessed relative to arthropod richness, vegetation and arthropod community composition, and ground-cover characteristics in 3 habitats: undisturbed, burned and weed infested ( B. tectorum ), and burned then rehabilitated with native and nonnative vegetation. Arthropods were collected in each habitat using pitfall traps. Differences in arthropod richness were compared using rarefaction curves. Nonmetric multidimensional scaling and nonparametric multivariate statistical procedures, including analysis of similarity and similarity percentage routines, were used to compare arthropod and vegetation community composition and ground-cover characteristics between habitats. Arthropod communities in the rehabilitated habitat were distinct from those observed in the undisturbed and weed-infested habitats. Rehabilitation in this study resulted in a shift toward conditions observed in an undisturbed habitat and perhaps is an intermediate step to complete restoration. Arthropod richness, arthropod and vegetation community composition, and ground-cover characteristics were all useful indicators but returned slightly different results. Assessing multiple variables yielded the most complete understanding of the habitats studied.     

Road edge effects on litter invertebrate communities of subtropical forests

We assessed road edge effects on leaf-litter macroinvertebrates in laurel and pine forests in Tenerife (Canary Islands), studying composition, abundance, richness and diversity, and the role of environmental gradients. We sorted species to the finest taxonomic resolution possible and used a morphospecies approach when necessary. In all, 15,824 invertebrates were identified from 388 litter samples (from >500 species, five major phyla and 31 orders). Alien invasive species of Oligochaeta, Pulmonata, Isopoda, Diplopoda and Hymenoptera were frequent in both forests. Richness, diversity and rarefaction pointed to a disturbance threshold within the first 10 m off the road, and edge effects were steeper in laurel forest than in pine forest. Overabundant aliens were partially responsible for highly disturbed litter assemblages on this edge zone in both forests. Proximity to road edge caused gradients of disturbance of forest structure. Litter moisture, rock and litter cover in laurel forest, and grass and canopy cover in pine forest were the best predictors of community variation. Results seemed to give some empirical support to the intermediate disturbance hypothesis. This altered road edge zone may accumulate regionally causing net reductions of ecosystem area and quality, impacting on its integrity and biodiversity.