Genus Baseodiscus (Nemertea: Heteronemertea): Molecular identification of a new species in a phylogenetic context

A new heteronemertean, Baseodiscus jonasii sp. nov., is described from Guadalcanal, Solomon Islands. It resembles B. delineatus in inner morphology but can be distinguished from this species by its different colour pattern and differences in the nucleotide sequence of the mitochondrial 16S rRNA gene. The monophyletic status of the genus is investigated by reconstructing the phylogeny of six specimens from four species assigned to this genus, together with 22 specimens from nine other heteronemertean genera, using parsimony and Bayesian analysis. The results imply that Baseodiscus is a monophyletic group while several other heteronemertean genera are non‐monophyletic.     

Target-enriched DNA sequencing from historical type material enables a partial revision of the Madagascar giant stream frogs (genus Mantidactylus)

ABSTRACT

The subgenus Mantidactylus is a group of frogs endemic to Madagascar, including the largest anuran species on the island. Although these frogs are common and widely distributed, their taxonomy remains unclear. Two species are currently recognised, M. grandidieri and M. guttulatus, with another available name, Rana pigra, considered to be a synonym of M. grandidieri. However, molecular studies have suggested the presence of several cryptic species within the group. Additionally, due to the lack of prominent morphological features, allocating the available names to evolutionary lineages has proven challenging. In the present study, we take a first step towards solving these problems by using fragments of the 16S mitochondrial gene and RAG1 nuclear gene from all over the range of the subgenus to describe its genetic diversity. We also use a newly designed target enrichment laboratory protocol to sequence three mitochondrial fragments from five name-holding museum specimens (as old as 120 years) in order to determine to which lineages the existing names should be applied. The study of the 16S mitochondrial gene revealed 7 geographically separated lineages, distinct enough to be considered candidate species. Out of the five museum specimens analysed, four successfully yielded DNA sequences and could be attributed to one of the aforementioned lineages. Therefore, the name Mantidactylus grandidieri should be applied to the populations from North-Eastern Madagascar, while M. guttulatus refers to populations from inland localities along the Eastern coast of the island. On the other hand, the holotype of Rana pigra did not yield enough genetic material to allow definitive identification. While our data were not sufficient to assess the status of the four lineages distributed along the Eastern coast, the populations from North-Western Madagascar were highly distinct on both the mitochondrial and nuclear markers. We thus describe them as a new species, M. radaka sp. nov.

http://www.zoobank.org/urn:lsid:zoobank.org:pub:1EDDAF0D-FE37-490A-B09E-E136A0C5CB35     

A new nurse frog from Southwestern Amazonian highlands,with notes on the phylogenetic affinities of Allobates alessandroi (Aromobatidae)

ABSTRACT

Few studies have focused on the diverse fauna of southwestern Brazilian Amazonia. This region, spared from large-scale human occupation until the second half of the twentieth century, has been threatened by expanding agriculture, logging, and mining. Here, we describe a new nurse frog (Allobates, Aromobatidae) from the open highland habitats of Serra dos Pacaás Novos, one of the few large remnants of relatively intact native vegetation in the Brazilian state of Rondônia. The new species is diagnosed by its metallic orange dorsal colouration, weakly expanded discs on hands, and presence of two subarticular tubercles on Finger IV. A phylogenetic analysis based on DNA sequence data recovered the new species as more closely related to nurse frogs from the Madeira and Tapajós River basins; this pattern may reflect a history of dispersal uphill from a lowland ancestor. Our results also indicate that the generic assignment of Allobates alessandroi (Grant and Rodriguez, 2001), a high-elevation species from the Andes of Peru, needs to be reassessed; we discuss the phylogenetic affinities of this species based on morphological attributes.

http://www.zoobank.org/urn:lsid:zoobank.org:act:79131D82-B1B6-455D-AD9A-676D7E0783BC     

Taxonomic revision of Ascidiacea (Tunicata) from the upper continental slope off north-western Australia

A collection of ascidians from 100–1000 m deep off the north-western coast of Australia has yielded 19 species, including one new, two possibly endemic to the north-western coast of Australia, four well-known Indo-west Pacific tropical species and 12 species known from the deeper waters of the western Pacific, of which 11 had not previously been recorded from off the western Australian coast or from other parts of the Indian Ocean. A third of these 12 species displays adaptations for a reduction in filter-feeding capacity, as do other known species from deeper slope and abyssal habitats. Nevertheless a connection with fauna of deep ocean basins of the Indian Ocean is not apparent at this stage. The full range of characters associated with species, genera and families are discussed, and those contributing to the identification of immature or mutilated specimens, as well as those relevant to an assessment of phylogenetic relationships, are emphasized.     

Preliminary report on the genetic structure of Glyphoglossus molossus (Anura: Microhylidae) from the Khorat Plateau,north-eastern Thailand

Glyphoglossus molossus, is one of the most economically important amphibians in the Khorat Plateau, north-eastern Thailand. It is categorised as a near-threatened species by IUCN due to over-exploitation. Here, we examined the genetic structure of G. molossus using partial mitochondrial cytochrome-b gene sequences from specimens collected at 11 localities. The sequence analysis revealed the presence of 15 haplotypes, 5 of which are shared by 2 or more populations, and 10 haplotypes that are confined to a single population. The relatively low haplotype (h) and nucleotide (π) diversities suggest that the Phu Phan Mountain Range is not high enough to act as an effective dispersal barrier between the Sakon Nakhon and Khorat Basins. However, AMOVA and phylogenetic analyses based on Maximum likelihood (ML) and Bayesian inference (BI) strongly supported the presence of two genetically divergent clades, Sakon Nakhon Basin and the northern part of the Khorat Basin (clade A) and the southern part of the Khorat Basin (clade B). These two lineages are separated by substantial geographical distance, which has putatively resulted in a reduction of gene flow. Further studies, with more extensive genetic sampling, especially from throughout the species range will aid in better interpreting our results.     

The fifth element: reconnection of the disjunct distribution of the members of Siphonocryptida (Diplopoda) with the description of a new species from Nepal

The fifth species of the millipede order Siphonocryptida, Hirudicryptus quintumelementum sp. nov., is described from Nepal. With this, the surprisingly disjunct distribution of the order with its four former species from Sumatra, the Macaronesian Islands, Malaya and Taiwan, has become connected through the relatively young mountain chains of the Himalayas. The new species shows the typical morphology of the order, with very little variation in external characters (in lack of male specimens). This may be the result of the conservative evolutionary history of the surviving small, widely separated, remnant populations of a once coherent, ancient range. The female vulva of the new species is described, and illustrated for the first time in the order.     

A new species of marine nemertean from Anglesey,North Wales,with a discussion of the genus Paroerstedia Friedrich, 1955

A new species of marine nemertean, Paroerstedia nigrimaculata sp. nov., is described and illustrated from a single specimen found among Corallina in a lower shore rock pool at Rhosneigr, Anglesey, North Wales. No Paroerstedia species has been recorded previously from the British Isles. The systematics of the genus and its contained species are discussed.     

Paranannopidae (Copepoda: Harpacticoida) from sublittoral soft sediments in Spitsbergen

Based on specimens of Paranannopidae collected from 30 to 123 m depth in Sassenfjord, Spitsbergen, two species of Paradanielssenia Soyer, 1970 (P. christineae sp. nov. and P. kathleenae sp. nov.) are described. These can be distinguished from known species by differences in the number of claviform aesthetascs on the mouthparts and in the arrangement or form of setae on the legs. A key to species of Paradanielssenia is provided. Mucrosenia gen. nov. (type species M. kendalli sp. nov.) is established on the basis of a single female and can be distinguished from all known paranannopid genera by the structure of the caudal ramus and the P2 endopod-2 which has no inner seta and a large mucroniform process at the outer distal corner. Psammis kliei Smirnov, 1946 is assigned to this genus as species incertae sedis. Danielssenia quadriseta Gee, 1988 is recorded for the first time outside its type locality in Oslofjord. Danielssenia spitsbergensis sp. nov. is described from a single male specimen and can easily be distinguished from other known species by the presence of only two outer spines on exopod-3 of P3-4. However, because of differences in the structure of the P2 endopod and P5, the species is placed incertae sedis within Danielssenia pending the discovery of the female.     

First observations on the phylogeny of the families Gammaridae,Crangonyctidae, Melitidae,Niphargidae, Megaluropidae and Oedicerotidae (Amphipoda,Crustacea), using small subunit rDNA gene sequences

This study examines amphipod phylogeny based on small subunit (18S) rDNA sequence data. Complete sequences of 25 species representing six families were used to test the phylogenetic information content of this gene for reconstruction of amphipod phylogeny. The alignment proved to be informative for most of the studied taxa. The monophyly of the families Gammaridae, Crangonyctidae, Niphargidae and Oedicerotidae is supported. The Melitidae are not monophyletic in the reconstructed topologies, but weak molecular evidence for the monophyly of this group could be observed in spectra of supporting positions. A close relationship of Gammaridae + Melitidae or Gammaridae + Crangonyctidae is not supported, rather there are supporting positions for the incompatible sister-group relationship (Gammaridae + Niphargidae) and (Crangonyctidae + Niphargidae). The molecular evidence is in favour of the latter relationship. The evolution of cephalothoracic apodemes is discussed in the light of other phylogenetic hypotheses resulting from molecular data.     

Four related species of root mealybugs of the genus Rhizoecus from east and southeast Asia of importance at quarantine inspection (Hemiptera: Coccoidea: Pseudococcidae)

New data on four related species of root mealybugs of the genus Rhizoecus, from east and southeast Asia, are presented in order to aid identification. One of these, R. carolinensis Beardsley, described from the Caroline Is., is now known to occur in Papua New Guinea and Sabah, East Malaysia. R. saintpauliae Williams, described from Thailand, also occurs in Hawaii and the Philippine Is. R. hibisci Kawai and Takagi, described from Japan, is now known from Hawaii. It has been intercepted in recent years at quarantine inspection in the USA and also in the Netherlands on plants from various localities in east Asia. A new species, R. bacorum sp. nov., is described from Sri Lanka. These species are probably polyphagous and are potential pests to horticulture, causing damage to potted plants if they become established in greenhouses. A key to all four species is presented.     

Evaluation of the taxonomy of Helix cincta (Muller, 1774) and Helix nucula (Mousson, 1854); insights using mitochondrial DNA sequence data

Phylogenetic relationships of the Aegean Helix cincta and Helix nucula with congeneric species found in Greece were inferred using mitochondrial DNA sequence data. Twenty-three specimens from mainland Greece, Aegean Islands, Cyprus and North Africa were analysed, revealing that (1) H. nucula is monophyletic, (2) H. cincta from Greece and Cyprus is paraphyletic, and so questions arise regarding the taxonomy of this species, and (3) H. cf. cincta from Tunisia might be considered as a distinct evolutionary lineage. Moreover Helix valentini, an endemic species of Kalymnos Island group, is clustered within the lineage of H. c. anatolica, so supporting the synonymy of the two ‘species’, and the elevation of H. c. anatolica to species level. Hence, our results stress the need for a taxonomic reconsideration of H. cincta in the Aegean Sea, indicating that sequence data can prove useful in overcoming taxonomic issues at both species and subspecies level.     

XXII.—On the structure of the palate and mandible of Archegosaurus decheni,Goldfuss

Summary

The genus Helixotionella is introduced for three species of spirally budded, free-living, lunulitiform bryozoans from Australia, H. spiralis (Chapman), H. rubra (Bretnall) and H. scutata sp. nov. H. spiralis, the type species, has a fossil history extending from the Upper Oligocene of Victoria, but like H. scutata, has been found to occur in Recent samples from Western Australia. H. rubra is known only from the Recent of New South Wales. All species have minute colonies and the majority of specimens has been revealed only after detailed examination of very fine fractions of bottom sediments, which themselves include a high proportion of bryozoan skeletal material.     

Three new species and one new record of the genus Doryphoribius Pilato, 1969 (Tardigrada: Eutardigrada: Hypsibiidae) from the Great Smoky Mountains National Park (Tennessee,USA)

Box jellyfishes (Cnidaria: Cubozoa) have a profound impact on human activities because of their highly potent venoms that may lead to severe envenomations in humans. Cubozoa is one of the smallest classes within Cnidaria with only some 50 described species in seven families. The literature on Cubozoa is scattered and oftentimes difficult to access. In particular, comprehensive treatments of Cubozoa that present a comparative overview of the group are either non-existent or largely outdated. Here we provide a synopsis of the carybdeid Cubozoa (Carybdeida) including an illustrated key to the families and genera of this order. Of particular interest is the family Carukiidae, which contains the species that was originally attributed with causing a severe envenomation syndrome called Irukandji syndrome. One new species of Carukiidae, Malo filipina sp. nov., is described, Morbakka virulenta is redescribed and a neotype is designated, and an unidentified species of Morbakka is recorded from the Philippines.     

A herpetological survey of the Kathmandu Valley,Nepal, and phylogenetic identification of Megophrys (Xenophrys) zhangi

ABSTRACT

The herpetofauna of Nepal have been historically understudied, and although previous studies have reported on bioinventory surveys of the Kathmandu Valley, few have surveyed widely during the peak monsoon season. In addition, past studies largely neglected to survey intact forest habitats. Here we conduct a comprehensive field survey of the herpetofauna of the Kathmandu Valley, Nepal, with an emphasis on the surrounding foothills containing intact forest habitat. We record natural history and distribution data for seven species of amphibians and four species of reptiles. We also use mitochondrial sequence data to confirm the phylogenetic placement of two frog species, Megophrys (Xenophrys) parva and Duttaphrynus melanostictus. Using phylogenetic and morphological data we assign Megophrys parva from the Kathmandu Valley to Megophrys zhangi. We find that while this species shares a haplotype with its sister species, Megophrys monticola, morphological data align the individuals from the Kathmandu Valley with M. zhangi from Tibet. We find that M. zhangi exhibits no phylogenetic structure within the Kathmandu Valley, and wider sampling is needed throughout the Himalayas to determine its full range. These findings support the hypothesis that molecular sequence data will lead to the discovery of cryptic species in Nepal and facilitate the revision of species taxonomy.     

A new species of the genus Liopeltis Fitzinger, 1843 from Vietnam (Squamata: Colubridae)

ABSTRACT

A new species of Liopeltis from central Vietnam is described based on morphological and molecular differences. Liopeltis pallidonuchalis sp. nov. is distinguished from its congeners by a combination of the following characters: one single (or missing) loreal; one single nasal shield; dorsal scales in 15–15-15 rows, all smooth; 1 preocular, 2 postoculars and 1 + 2 temporals; 7 supralabials, of which 3^rd and 4^th in contact with the eye; 8 infralabials; nasal contacting internasal; prefrontal touching or separated from supralabials; ventral scales 126–138; subcaudal scales 67–73, paired; relative tail length about 0.274–0.301; an uniform bronze body colouration; a thin postocular stripe extending from eye to end of the neck becoming indistinct posteriorly. The new species differs from the morphologically closest species Liopeltis frenata by the lower number of ventrals and subcaudals, by characteristic colouration and significant divergence in cytochrome b mtDNA gene sequences (p = 15.3–15.6%). The new species is currently known from northen and central parts of the Annamite (Truong Son) Mountains, central Vietnam, and was recorded from montane evergreen tropical forests of Kon Tum–Gia Lai Plateau (Gia Lai and Thua Thien–Hue provinces, Da Nang City) at elevations of 950–1010 m asl to karst tropical forests in Quang Binh Province in the north at elevation 150 asl. We suggest the new species should be considered as Vulnerable (VU) following the IUCN’s Red List categories. An updated taxonomic key to the Liopeltis species is provided.     

A new species of the genus Zhangixalus (Amphibia: Rhacophoridae) from Vietnam

ABSTRACT

A new rhacophorid species is described from Vietnam on the basis of nine specimens collected in Quan Ba District, Ha Giang Province, northeastern Vietnam. The new species is morphologically similar to Zhangixalus pinglongensis, Z. dorsoviridis, and Z. nigropunctatus, however, it differs from the latter by having the flank cream with large black blotches on axilla and groin. The genetic distance between the new species and Zhangixalus pinglongensis, Z. dorsoviridis and Z. nigropunctatus is >3.57% (16S mtDNA gene fragment). Zhangixalus jodiae sp. nov. can be distinguished from all other species of Zhangixalus and other small rhacophorid species from Southeast Asia by a combination of the following characters: size small (SVL 36.1–39.8 mm in males); head as long as wide; vomerine teeth present; dorsal surface of head and body green without spots; axilla cream with large black blotches, groin and front-rear parts of the thigh, ventral surface of tibia black with orange blotches; lower jaw region greyish, chest and belly cream.

http://www.zoobank.org/urn:lsid:zoobank.org:pub:89597718-024F-4FFC-B0AE-2005F12CF66C     

The ontogeny description of two Neotropical species of Crotonia (Acari: Oribatida: Crotonioidea)

A remarkable new species of black fungus gnat Pnyxiopalpus roslii sp. nov., was discovered from nests of the termite Nasutitermes proatripennis in Ulu Gombak, Malaysia, and is described based on the female morphology and DNA barcodes. This is the first record of a termitophilous black fungus gnat from South-east Asia. The new species is easily distinguished from its known congeners by the degeneration of all thoracic setae into tiny setulae. This species is described as a symbiont of the host termite based on field observations and the examination of specimens. The “wing stump” structure of the new species indicates that this species has wings after eclosion and later loses them, an adaptation to a cryptic life. A second still undescribed termitophilous species of Pnyxiopalpus was observed walking in a marching column of the termite Longipeditermes longipes in Ulu Gombak.